Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->ZAT14                                                         <---------ZAT14                                                         --------->ZAT14                 ------>ZmHOX2a(2)                       --------->YAB1                  <---------ETT(2)                 <------ZmHOX2a(2)                <---------AHL20(2)                  ------->GAMYB             --------->ANAC58               --------->AHL20(2)                 <---------At5g28300         --------->ANAC46          <------ZmHOX2a(1)                      <-----------GT1<---------REM1(2)      <---------ARR11(3)       --------->HSFB2a(2)                       --------->MYB52(1)           --------->ANAC58   ----       <---------HSFB2a(2)                      --------->AHL20(2)          <-----------GT1      ====    <---------YAB1    ------->TEIL       --------->ZAT6--------->ETT(2)  --------->YAB1--------->ARR11(3) -----ATHB12--------->CCA1(2)      >>>>>>>>>TBF1<---------AHL20(2) --------->ANAC46  --------->MYB59   caaactattctaggatataaaatgaacataatttgaagaagaaacactaattaactgtctacagtctacacacatttataacgcaattagatcccaaaca  20927100                     --------------->AGL15                   -------->P               ------->TEIL               --------->ARR14(2)               <---------ARR11(1)               <---------ARR14(2)              <---------CCA1(2)            --------->ANAC58            --------->O2            <---------ANAC55(2)                                   ------>ZmHOX2a(1)            --------->ANAC55(2)                                   <---------------AGL15            --------->ANAC58                                      --------------->AGL15            --------->ANAC55(1)                                  --------->TOE1(3)            --------->ANAC46                                     --------->TOE2(3)            ============================================bZIP_DOF --------------->AGL15            ================MYC_MYB              <---------HSFB2a(2)            <---------TGA1a                      --------->HSFB2a(2)    --------->YAB1  <---------MYB52(1)            --------->TGA1a                   <---------YAB1<---------HSFC1(2)          --------->DOF5.7(2)        <---------ALFIN1          <---------AHL20(2)        <---------HSFB2a(1)        --------->TOE2(3)     --------->ANAC46============================================================MADS_MADS ------>DOF2<---------O2     <---------YAB1  <----------DOF2--------->HSFC1(2)     --------->ANAC46 =====================bZIP_DOF    --------->AHL20(2)        --------->HSFB2a(1)<-----------GT1   aaagcataccacacacgtatctaccaaaattatcaataaaatcacatctttatagaaatggaagtttccttaaataagaatttacacatcgttaatggaa  20927200                                                    <---------ANAC46                                                    <---------ANAC58                                              -------->ATHB1                                              --------->ATHB12                                              <---------ICU4                                     --------->WOX13(1)                     ------->TEIL                             --------->YAB1  <---------YAB1        <---------ARR11(3)               ---------->DOF2     <---------ATHB12 <---------ANAC58      <---------ZAT18   <---------ICU4         --------->YAB1--------->YAB1             --------->GLK1(2)  --------->ICU4         <---------ATHB51   --------->GLK1(2)      <-----------ARR10   tgtaatcagtagaaatagaaagaaacaataataagaaatcaatgagaatcattggcgtaattgtgtcagtatctaatgcacatccacttatatatagaca  20927300                           <---------YAB1                     --------->AHL20(1)           --------->MYB59                     <---------AHL20(2)     <---------MYB52(1)                    --------->AHL20(2)--------->ARR14(2)                <----------DOF2           ---              <-----------GT1         <---------ARR14(2)           --------->MYB52(1)             <--         <----------DOF2 <-----------GT1  ----------->GT1      --------->ZAT6                     <--         <---------DAG2  --------->YAB1------->TEIL          --------->YAB1                       ---      <-----------GT1--------->AHL20(2)--------->MYB52(1) ----------->GT1                   ------->GAMYB   catatttttaactttattacaaattaattacaatttagacgaaccggttaattcggtaaccagtaatactaacgcgtttagggattagtatcaacagcaa  20927400                      <---------AHL20(2)              <---------AHL20(2)              --------->AHL20(2)  --------->AHL20(2)             --------->AHL20(2)   <---------AHL20(2)             <---------AHL20(2)   ----------->TBP       <<<<<<<<<TBF1                               <    <-----------HVH21<---------AHL20(2)   <---------------AGL15                                   --- ------>ARR14(2)     --------->AHL20(2)   --------------->AGL15                                   <-- -------ARR14(2)  --------->AHL20(2)      ------>ZmHOX2a(1)           *TSS                        --- -------ARR11(3)  <---------AHL20(2)     <-----------------AGL2       <-----------HVH21       <------ ------>GLK1(2)  --------->AHL20(2)      <-----------------AGL3    <----------DOF2          ---------   aatctgtgtcactaaattaataaataaatagagaatataaattcctcattttggtttcttcttcaacctctttgtcagagaagtttcaaaaaacccacac  20927500    --------->ZAT14   <----------DOF2   <---------DAG2 ---------ALFIN1 ------>ANAC58                                                                     <---------ANAC58 -------ALFIN1                                      <---------ICU4                 <---------ANAC58-- ------>ANAC58                   ------>ZmHOX2a(1) <---------YAB1             <---------ICU4     ---- ---ALFIN1                 <<<<<<<<<TBF1     <<<<<<<<<TBF1        <-----------RAV1(1)    ============ -->RAV1(1)             <<<<<<<<<TBF1  ---------->ID1             <---------MYB46(3)     ------>ZmHOX2a(1)   acacactttacacactcttcatcttcttcttcttcctcttcgtcttcttcttcatcatcgttttcgatttgttgctccgataatgtcgttcctataaccc  20927600                                                              <---------ARR14(2)                                                             --------->ATERF1(1)                                                             <------NtERF2                                                            <---------RAP2.3(1)                                                            <---------ERF1                                                            ------>NtERF2                                                            <---------ATERF1(1)                                                            <<<<<<<<<AtERF-1                                                            <<<<<<<<<AtERF-4                                                            <<<<<<<<<AtERF-5                                                           <---------RAP2.6(2)                                                           <---------DEAR3(1)                                                           <---------RAP2.3(3)                                                           <---------RAP2.3(2)                                                           <---------ANAC46                  <----------ID1                    <---------YAB1       <-----------GT1  <------ZmHOX2a(2)                              <---------YAB1 <---------At4g35610 --------->ARR11(3)         --------->TOE1(3)  <---------ICU4<---------At4g35610 <---------ARR11(3)         --------->TOE2(3) --------->ICU4<<<<<<<<<AtERF-3        <---------ANAC58 --------->ARR10  ----------->GT1             <---------YAB1<---------MYB46(3)      <---------ANAC58 ----->LBD16  ---------->DOF2              <---------TOE2(3)<<<<<<<<<AtERF-2     <----------DOF2 ========HOX2a_HOX2a      <xxxxxxxxxxxxxxxxsmallRNA(i)    --------->RAP2.6(3)---------->ID1  <-------   gaagatcatcaacgaagaaagcgaaaaaaacctcaaaaaatcactgagattattacaaatggcggctactgattttttcttcgctttcgtcttctctttc  20927700                                           <---------TOE1(2)                                   <---------ANAC58                                   <---------ANAC55(1)                                   <---------ANAC58                                   <---------ANAC55(2)                                   --------->ANAC55(2)        --------->ANAC46                              <---------ICU4<---------YAB1    --------->REM1(1)                     <                 <----------DOF2------>ZmHOX2a(1)           ------>ZmHOX2a(1)            ------>ZmHOX2a(1)  <---------CCA1(2)           =====================================HOX2a_HOX2a          --------->TOE2(3) ---DOF2   <---------GLK1(2)  ------>ZmHOX2a(2)   <-----------GT1            ------>ZmHOX2a(1)      <   gctcttatcttcggcttctctttcgctggtgatccttacgtctcttacgatttcaccctctcctacatcactgcttctcctctcggtgttcctcaacagg  20927800                                                                   <---------MYB52(1)                             <-----------GT1                       --------->DOF5.7(2)                   <-----------GT1                                --------->TOE2(3)               <---------AHL20(2)                                 --------->TOE1(3)      <------------------------ANAC81                 <---------TOE2(3) ---------ANAC58   ---------->ID1                     <---------TOE1(3) ---------ANAC58  <-----------GT1       <-----------GT1          ----------->GT1    ---------->ID1   tttcgtttcgcttccatttttttccctcttaaaaccctattttttccttcgaaattgaggttttgaaacgttaatctagtgattttgtctccttgatttt  20927900                                                    <---------MYB46(3)                                                    ----------->GT1                            --------->ZAT6         --------->ALFIN1                        ------>ZmHOX2a(2)          <---------AtMYB61                              <--                       <------ZmHOX2a(2)         <---------ZAT2                                   <--                      --------->ARR11(3)        <---------DEAR3(1)                            -------                      --------->AGP1            <---------AtMYB61                           <--------           <-----------RAV1(1)               <---------DEAR3(1)                           <---------ANAC55(1)           <---------MYB46(3)    <---------YAB1<------NtERF2                              <---------ANAC46    <---------TOE2(3) <---------AGP1  <-----------GT1                    --------->YAB1   <---------ANAC58   --------->MYB52(1) <---------ARR11(3)   <-----------HVH21       <---------At4g35610    <---------ANAC58   gctaataacgtagttgttgctctagatctaacattacgattaactcgtcggaggtggtttcaaagtttgagcttatcagattggattttgtttcgtgtgt  20928000  Previous    Next  AGI:  At5g51480.1    Description:  SKS2 (SKU5 SIMILAR 2); copper ion binding. Identical to Monocopper oxidase-like protein SKS2 precursor (SKS2) [Arabidopsis Thaliana] (GB:Q9FHN6); similar to SKS1 (SKU5 SIMILAR 1), copper ion binding [Arabidopsis thaliana] (TAIR:AT4G25240.1); similar to SKU5 (skewed 5), copper ion binding [Arabidopsis thaliana] (TAIR:AT4G12420.1); similar to SKS3 (SKU5 Similar 3), copper ion binding [Arabidopsis thaliana] (TAIR:AT5G48450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70326.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42682.1); similar to hypothetical protein OsI_033112 [Oryza sativa (indica cultivar-group)] (G Range:  from: 20927470    to: 20930677    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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