Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <--------HAHB4                                           <---------ICU4                              <------ZmHOX2a(1)     <---------YAB1      <---------ZAT2    --------->YAB1               <---------YAB1              <   --------->AHL20(2)    <---------At4g35610 <---------YAB1        <---------ZAT6                   <  <---------YAB1---------->DOF2           <---------YAB1        <---------AtMYB61                 <--  <---------AHL20(2)   --------->ZAT18    <---------ATHB12   <-----------RAV1(1)              -------   ggatattatttatggagaaaaagagtctgctaggacgattttctatcattatacctatggactatggtggtgttatcaaacatgctggacagagccatga  20909600     <-------TEIL --------->ANAC46     <---------HSFB2a(2)                                            <---------YAB1 - XXXXXXXXXXXXXXXXXXXXMIR397B                                             --------->ANAC58     ------- ---------------------WRI1                                               --------->ANAC46   --------- -------WRKY38(1)     --------->HSFB2a(2)                 --------->TOE2(3) --------->MYB52(1)<------ -->ICU4          --------->KAN4(2)                     <-------TEIL     --------->ANAC58  --------->ALFIN1   tcaacgatacattcgatgctcattctcgatgttcaaactcggttttataaggggatgatacatcaaattgataccaagtaactgattttgaatgtgctgg  20909700                                 --------->ALFIN1                    -------->P   <---------MYB46(3) -------->ICU4    --------->MYB46(3)  <---------PCF2                                <---------MYB52(1) -->HSFB2a(2)    <---------At4g35610 <----------ID1                         <-----------GT1    ------ >At4g35610      --------->At4g35610 <----------ARF1   --------->GLK1(2)  <-----------GT1      <----- ---HSFB2a(2)   --------->ANAC46--------->ALFIN1<---------YAB1     <---------MYB52(1)     ---------->DOF2   aaatgttgatataggtctcagcaaccagaagaaggttgtgggacaagactattagagaattttgctaccgtttttttttcacctctgtttggcaaagcgc  20909800                                                              --------->TOE2(3)        <---------At5g28300                                 --------->WRKY38(1)        <------NtERF2             <-----------GT1                              <---------DEAR3(1)         <------NtERF2            <---------AHL20(2)                             <---------ZAT14           --------->ETT(1)       <----------DOF2         <----------DOF2     --------->ZAT14          --------->RAP2.6(3)     <---------DAG2 <----------DOF2         <---------ALFIN1         <---------ANAC58         <-----------GT1 --->ZAT18              --------->MYB46(3)        <---------ANAC58      <---------ANAC55(2)         < ----ZAT18       <----------DOF2 ----------->HVH21--------->MYB52(2)    --------->ANAC55(2)   -------   gctctttatagctttacttctttggaaccacttcggtgaccatagaactcgttcgtgtcggcatcgtcaaatttaagtaactttttatttaccgcatggt  20909900                                                                                            <--------                                                                                           <---------ZAT2                                                                                           --------->ZAT2                                                                                           --------->At4g35610                                                                                           <---------At4g35610                                                                                          --------->ALFIN1                                                                                         ------->PIF5                                                                                         <-------PIF5                                                                                        --------->LBD16                                                                                       <---------DREB2C(2)                                                                                       <---------DEAR3(1)                                                                                       --------->ATERF1(2)                                                                        *TSS           <---------ATERF1(2)                                                                       --------->DAG2 <---------LBD16                                                       <---------HSFB2a(2)    --------->ANAC46                           <---------AHL20(2)          --------->HSFB2a(2)    --------->ANAC58  <---------AHL20(2)      <-----------TBP    <---------ANAC58         ---------->DOF2 <---------ANAC46 ---------YAB1        --------->LBD16        <---------ANAC58   <----------ID1--------->ANAC58 ---->GT1           <---------LBD16       <-----------GT1 ---------->DOF2   <------ZmHOX2a(1)    <---   ttattattttgagtttttttcttccgcattttatattcttcatttttccttgtccatcgagaaagagagacaaaaagaggacgcaattgccggtgctgag  20910000    <-----------GT1  --------->HSFC1(2)                             <---------ARR14(2)  <---------HSFC1(2)                             --------->ARR14(2)                            ------  --------->HSFB2a(1)                       <---------At4g35610                                <-----  <---------HSFB2a(1)                       --------->At4g35610                                <----- <---------KAN4(2)  <---------TOE2(2)       <---------ZAT14<---------ARR11(3)              <--------- --CDC5   <---------ATHB12    ------>ZmHOX2a(2)  --------->GLK1(2)                      <---------ATHB12 ---ZmHOX2a(1)     <-----------RAV1(2)      --------->ZAT14--------->ARR11(3)      --------->TOE2(3)<   gagaattttccaatcgcgaactcaggttttgatccatttcgctctctgcagaatccaccattatcttcatattttcttctattgacctcaatctttcagc  20910100                                                                                                -----                                                           --------->ARR11(3)         ------->TEIL            <---------MYB46(3)                             <---------ARR11(3)     <---------TOE1(2)            ----------->GT1                             --------->ANAC55(2)      ------>ZmHOX2a(1) --->At4g35610                 <---------GLK1(2)        <---------ANAC55(2)     --------->TOE2(2) ----ZAT2 <---------MYB52(1) <---------TOE1(2)     <---------AHL20(2)           --------->TOE1(2) ----At4g35610         <---------GLK1(1)          --------->AHL20(2)         <---------ARR14(2) <---- --HVH21 <----------DOF2 <-----------GT1     --------->ANAC55(2)             <---------ARR11(3)<----- ---------CCA1(2) <---------WOX13(1)       <-----------GT1<---------CCA1(2)  --------->ARR14(2)------   tcatctctctcctttggttaattgaatttcccagtttcttcaattttacttatttaatacatatctctctcaattgcagtatcctatgaacttcgtgatc  20910200                                         --------->AHL20(1)                                         --------->AHL20(2)                           <---------ANAC58                     --------->ATHB12    <---------AHL20(2)                 <---------ANAC58       <---------AHL20(2)                                       <--- ---->YAB1       <---------ANAC58       --------->AHL20(2)                                      <---- -----ICU4   <---------ANAC58       <---------YAB1                                          <-------- ----YAB1    <---------ANAC58   --------->TOE2(3)                                           <-------- --->ICU4  <-----------GT1 <---------ANAC58             <-----------GT1           <----------DOF2<---   atggttttgaattttacttgcttcgattggcctacgttataaaaaaattgaaactttttaactcaattctctaacttacataagcttttggtttgcttag  20910300                               --------->AtLEC2                               <---------YAB1                            --------->TGA2(2)                           <---------RAP2.6(3)                          <---------TGA1a                          --------->TGA1a                          --------->ANAC58                          =================================MYC_MYB                          --------->ANAC58                          <---------TGA2(1)                          --------->bZIP60(2)      <-------GAMYB                          --------->TGA2(1)<---------ARR14(2)                          --------->bZIP60(1)     ----------->GT1 ------ANAC58             <---------bZIP60(1) <-----------RAV1(1) -----At4g35610          --------->SPL7    --------->ARR14(2) -ANAC58             <---------At4g35610   --------->GLK1(2)                                       -- -ANAC58 --------->YAB1----------->HVH21  <---------GLK1(2)                --------->YAB1          <- ------ANAC58      <-----------RAV1(2) --------->YAB1    <---------LBD16  <---------YAB1         <---   cttatgcaaaatcatgttgatgcaggggacgtcatgctaaatgagaatctgtgggttaattcggagtgagaaggctataatagtttctaatggggataac  20910400             --------->LBD16            <---------ANAC58            <---------ANAC58            <---------ANAC46        <---------GLK1(1)         <----------DOF2        --------->GLK1(1)  <----------DOF2                                        --------->At4g35610 ------->ARR14(2)    ----------->RAV1(1)                                          <---------At4g35610 --------ARR14(2)   --------->MYB46(3)                                  <---------WOX13(1) ------AHL20(1)   ----------->RAV1(1)                                <---------YAB1 ----------->HVH21   atatttgcacatttccgtggcaacaacagctttgagctttgtgggtttacaagtctggacggagttgtctcttgatagacttagagctgatgggataatc  20910500  Previous    Next  AGI:  At5g51450.1    Description:  RIN3 (RPM1 INTERACTING PROTEIN 3); protein binding / zinc ion binding. similar to RIN2 (RPM1 INTERACTING PROTEIN 2), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G25230.1); similar to RIN2 (RPM1 INTERACTING PROTEIN 2), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G25230.2); similar to ERAD RING E3 [synthetic construct] (GB:ABG85250.1); contains InterPro domain Ubiquitin system component Cue (InterPro:IPR003892); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 20909972    to: 20914817    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version