Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->ANAC58                                                   --------->ANAC58                                        --------->ANAC58                                            <                                        --------->ANAC58                     <-------TEIL          --              ------>ZmHOX2a(1)       --------->CCA1(2)                     --------->CCA1(2)      <- <---------HSFB2a(2)               <---------TOE2(3)              --------->ANAC58            ------- --------->HSFB2a(2)      <---------ATHB12  ---------->DOF2       --------->ANAC58           -------- ---YAB1      --------->LBD16------->TEIL--------->At4g35610     --------->DAG2             --------- >YAB1      ----------->RAV1(2)    <---------YAB1---------->DOF2---------->DOF2           <---------MYB52(2)   attctcgagcatgctcctgaaaacaacaatgaagcttaagataagctaaagaaaagcatcatacaaaaaagcaagtagatacaaatagtgagactaacca  20900500        <---------ANAC58        <---------ANAC58        <---------ANAC46    <----------DOF2 ------>ZmHOX2a(2) =====================================HOX2a_HOX2a ------ZmHOX2a(2) ------->ARR11(3)              <------ZmHOX2a(1) --------ARR11(3)             <----------ID1 -->MYB46(3)     ---------->DOF2                                                <-----------GT1 >P <---------DAG2     <-----------HVH21                                     --------->ANAC46 >MYB52(1)<---------ZAT6   --------->ICU4               ------->TEIL       <---------ALFIN1------->TEIL   agatcgcttttcgtgttaacaaagaggtcatgaggacaaaatcgaaccatatagaatgcacatacttctctatcgtcccacttaacctccttgaaccctc  20900600                       --------->At4g35610                       <---------ZAT2                       --------->ZAT2                       <---------At4g35610                                                ---------->DOF2                    <---------ANAC58                                             <-------TEIL                    <---------ANAC58                                            --------->CCA1(2)               --------->At4g35610                                             <---------ARR14(2)               <---------At4g35610                                    <---------------AGL15    <-----           <-----------HVH21   --------->YAB1                        --------->TOE2(3)   --------->AHL20(2)   ttctctcttcgtctgtcagattacgagctgcaaacaaaatcgagagcaatttcaacaaaaattcgctcaattcttaacatggatacagaaattaaagctt  20900700                                                             <---------ZAT18                                                          <---------ATERF1(1)                                                        --------->ZAT2                                                        <---------ZAT2                    --------->AHL20(2)                  ================================MYC_MYB                    <---------AHL20(2)           --------->KAN4(2)                   --------->AHL20(2)           <---------KAN4(1)                <------ZmHOX2a(1)    --------->MYB59    ----------->RAV1(2)             <----------CDC5             --------->HSFB2a(2)     --------------->AtSPL8  ------>NtERF2         --------->ZAT2             <---------HSFB2a(2) --------->ARR11(3)     <---------At4g35610        <---------ZAT2   <---------At4g35610           <---------ARR11(3)     <---------TGA1a         ------->GAMYB   --------->At4g35610  ----------->GT1         --------->KAN4(1) <---------MYB52(1) --------->ZAT18 -----DOF2  <---------ANAC46     <---------GLK1(2)      --------->At4g35610  ----------->RAV1(1)   tggagagctcaatttcgaggattaaattgaaaatagattttggtactcgattattctcacctgcgcccattagttcgtccaacagagctcgctgagcatc  20900800              --------->ARR11(3)    <------NtERF2                          <---------TOE2(3)    ------>NtERF2                         --------->DAG2                                        -----  <---------ANAC46                       ---------->DOF2                                     --------  <---------ANAC58             --------->LBD16                                              ---------  <---------ANAC58     --------->TOE2(3)--------->CCA1(2)                        <------ZmHOX2a(1)   catggcgggctaagaagaaattgaaacttaatccagagagagataaaggaaattgcagaatcaaattgaagaaattttgaagaggatgacgaacaaaagt  20900900                            --------->O2                       --------->ANAC46                       --------->ANAC58                   <---------ANAC58                   <---------ANAC58                  ----------->GT1             <---------TOE2(3)               <-------TEIL                    --------->AHL20(2)        <---------ICU4 --------->ANAC58   <---------ANAC58          <---------WOX13(1)        --------->ATHB12   ------>NtERF2  <---------ANAC58        --------->ATHB12 ---->ALFIN1 <---------TOE1(3)*TSS       <---------------AtSPL3  <---------YAB1     --------->AHL20(2) ->DAG2--------->ICU4 --------->SPL7 ---------->DOF2<---------TOE2(3)       --------->AHL20(2) ->DOF2<---------YAB1<---------MYB52(1)--------->DAG2--------->YAB1<------------CBF--------->AHL20(2)   ggagaagtgatgattagggtttcgttcgccacgacgaataaaaggcgttcgtctatggtaaaactctatgattgcaaaataaaaaataaaaaactctatt  20901000                                                                                                 <---                                                                                             <-------                                                       --------->ANAC58                      --------                   <---------ICU4                      ----------->GT1            --------->AHL20(2)                --------->YAB1                         --------->ANAC46           <---------AHL20(1)           <---------YAB1                              <---------ANAC55(2)        <---------AHL20(2)           --------->ICU4                              --------->ANAC58           --------->AHL20(1)         --------->YAB1                            --------->ARR11(3)            <---------AHL20(2)         <---------ICU4                         --------->YAB1                   --------->AHL20(2)        <---------AHL20(2)     --------->DAG2   --------->AHL20(2)       --------->MYB52(1)  --------        <---------ATHB51      ---------->DOF2 --------->AHL20(1)      --------->ANAC46  --------->AHL20(2)    <---------AHL20(2)    --------->ANAC58    --------->AHL20(2)      <---------ANAC55(2)    <-------    --------->AHL20(2)    --------->ANAC58   --------->YAB1           --------->ANAC55(2) --------->YAB1  ----------->TBP  --------->YAB1          --------->AHL20(2)         --------->ANAC55(1)<---------AHL20(2)   ccctatataaataatgaataatcatatcaagaaaaagttgaactaaaaaataatatcacgaaaaaacaaaacacttaacgaaattaaatttttaataaat  20901100                                                               <---------AHL20(2)                                                           --------->AHL20(2)           xxxxxxxxxxxxx        --------->DAG2             <---------YAB1          <---------AHL20(2)   --------->AHL20(1)       ---------->DOF2            <---------AHL20(2)     <---------WOX13(1)     --------->ARR11(3) ----TEIL                    <---------AHL20(2)   --------->ARR11(3)            <---------AHL20(1) --AHL20(2)              <---------TOE2(3)        --------->AHL20(1)      ----------->GT1 ->AHL20(1)    --------->YAB1--------->AHL20(2)   <---------AHL20(1)     xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ->AHL20(2)   <---------ATHB12  <---------------AGL15  --------->ATHB12 ---------->DOF2 ------>ZmHOX2a(2) --AHL20(1) --------->WOX13(1)  <---------YAB1   --------->YAB1<---------YAB1>>>>>>>>>>GT-3b    <----   tcatagacataaggcaatcacaaatttaagttttattattttagaaaacaaaaatattgatttatattataggggaaagaaaaatattgatcgctaaata  20901200                                                   <---------ARR14(2)                                                  <---------GLK1(1)                                                  --------->WOX13(1)                                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                       <---------YAB1                     --------->ARR14(2)    --------->MYB52(1)                   --------->ATHB51                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    --------->YAB1       --------->AHL20(2)         --------->ARR11(3)               <---------ARR14(2)                    <---------AHL20(2) <---------AHL20(2)  <---------ARR14(2)   --------->ARR14(2)              --------->TOE1(3) --------->AHL20(2)  <---------GLK1(2) --------->YAB1      ----------->GT1--------->TOE2(3)--------->ANAC55(2) xxxxxxxxxx>smallRNA(le3)        --------->YAB1   --------->GLK1(1)      ----------->RAV1(2)     ---- ---TEIL <---------ARR11(3)   xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     --------->ANAC46       <---------ANAC55(2)   catttatttcagatattagaacagatactagcgaataaaaatcagaaacgggcaatccgaatagtaaaaaacacaacctgaattatttttgatacctatt  20901300                                           ----------->GT1                                         --------->ABI4(2)                                         <---------ZAT18                                         <xxxxxxxxxxxxxxxxsmallRNA(s)                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                       <---------SPL7                                       xxxxxxxxxxxxxxxx>smallRNA(i)                                      <---------ANAC58                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                      xxxxxxxxxxxxxxxx>smallRNA(s)                                      <xxxxxxxxxxxxxxxxsmallRNA(s)                                      <---------ANAC46                                      <---------ANAC58                                      xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     <---------DEAR3(1)                                     <xxxxxxxxxxxxxxxxsmallRNA(i)                                     <xxxxxxxxxxxxxxxxsmallRNA(s)                                    <xxxxxxxxxxxxxxxxsmallRNA(i)                                    --------->ZAT14                                    <---------ZAT14                                    --------->ZAT18                                   <xxxxxxxxxxxxxxxxsmallRNA(i)                                   <xxxxxxxxxxxxxxxxsmallRNA(s)                                   --------->ALFIN1                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                  xxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                  xxxxxxxxxxxxxxxx>smallRNA(s)                                  xxxxxxxxxxxxxxxx>smallRNA(i)                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                         --------->ZAT14xxxxxxxxxxxxxxxxxx>smallRNA(le3)                         <---------ZAT14xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        --------->ALFIN1xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                          <                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                        x                     <---------DEAR3(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        <                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                             <x                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                            xx                 <----------DOF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             xxx                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------->MYB52(1)                        xxxx              <---------ANAC58  <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                <xxx              <---------ANAC46 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             xxxx              <---------ANAC58 xxxxxxxxxxxxxxxx>smallRNA(i)                                      xxxx           <---------DEAR3(1)  xxxxxxxxxxxxxxxx>smallRNA(s)     <---------AHL20(1)              <xxxx           <---------RAP2.3(3)xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <xxxx          --------->At4g35610 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             <xxxxx          <---------At4g35610 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                             <------          <------NtERF2xxxxxxxxxxxxxxxx>smallRNA(s) --------->YAB1                        --------->ARR11(3)          --------->ATERF1(1) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        <---------GLK1(2)         <---------MYB46(3)  xxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------->AHL20(1)        <---------ARR11(3)        <---------RAP2.6(2)  <------ZmHOX2a(1)     <xxxxxxxxxxxxxxxxsmallRNA(i)          xxxxxxxxxxxx        xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------MYB46(3)   --------->ARR11(3)       xxxxxxxxxxxx      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<---------DEAR3(1)   --------->AHL20(2)        xxxxxxxxxxxx    xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxsmallRNA(s)    --------->CCA1(2)--------->ICU4   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ALFIN1 ----------->GT1         <xxxxxxxxxxxxxxxxxxx   <---------AtLEC2 <---------LBD16xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<-------TEIL  ---------->DOF2 ----->ATHB12<------NtERF2<-----------RAV1(2)<xxxxxxxxxxxxxxxxsmallRNA(s)       ------->TEILxxxxxxxxx   gatttgaatggtggctgcgttttgcggtgcaggagaagtgcggtgcggttcaaatagtaacgaaaatatatagatacatatgtatatgtaaagattttga  20901400  Previous    Next  AGI:  At5g51410.1    Description:  LUC7 N_terminus domain-containing protein. similar to UNE6 (unfertilized embryo sac 6) [Arabidopsis thaliana] (TAIR:AT3G03340.1); similar to salt tolerance protein 3 [Beta vulgaris] (GB:CAC85244.1); contains InterPro domain LUC7 related (InterPro:IPR004882) Range:  from: 20898593    to: 20900930    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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