Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               ------>ZmHOX2a(1)                         --------->ARR14(2)                         <---------ARR14(2)                         ------->TEIL                        <---------CCA1(2)        --------->ZAT14 <---------ICU4       --------->ANAC55(2)    <---------ALFIN1                              --------->ANAC58 --ALFIN1             --------->ANAC46      --------->MYB46(3)                             --------->ANAC46 >ZAT18               <---------ANAC55(2)  -------->P                                      --------->ANAC58 >ZAT14               --------->ANAC55(1)--------->MYB46(3)                             --------->TOE1(2) -ZAT14              <-------TEIL   --------->ANAC46  --------->GLK1(1)                <---------At4g35610   tcatcaatacattctcaaacacatacgtatcctcttatactaaacaaccacttcagaattcaaaaacctcgaaactctcagaaattttaagctacgaaat  20812200                            ----------->GT1                    --------->TOE1(2)                    <-------MYC2                    <-------MYC3                    ------->MYC3                    ------->MYC2                  <-----------------------TaNAC69(2)                 <---------DOF5.7(2)               --------->DOF5.7(2)                                                                  -             <---------ANAC55(2)                                                                    -             --------->ANAC58                                  --------->ANAC58                   ---             --------->ANAC58                                  --------->ANAC46                 <----             <---------ANAC46                                  --------->ANAC58         <---------GLK1(1)             --------->ANAC55(2)                         <---------ANAC58               --------->GLK1(1)            <-------TEIL---------->DOF2          <------ZmHOX2a(1)    <-----------RAV1(2)       -----        <---------------AtSPL3          <---------ETT(2) <---------ANAC58     <-------GAMYB     <----   gaacaaataccaggtacgtaaacgtgcaaagcgtaatttccatcgacatgaggaaagtttcttacacgaactccaggctctgttgagaagaaatccagtg  20812300                                                                 --------->WOX13(1)                                                                --------->MYB46(3)                                                               <---------KAN4(2)                                                             <------ZmHOX2a(1) -------->TOE1(3)          --------->ANAC55(2)             <---------TOE2(3) -------->TOE2(3)          <---------ANAC55(2)          <---------WOX13(1) ---->TEIL         --------->AHL20(2)                 --------->ATHB12 -----ZAT18  --------->ANAC46     ----------->GT1    <---------YAB1                            ------ ---->ZAT14  --------->ANAC58   --------->ICU4       <---------AHL20(2)                        <----- -----ZAT14  --------->ANAC58   <---------YAB1    --------->GLK1(2) --------->YAB1      <-----------ARR10   aaccttcaagttcagacgaaataaaaaataagtgatgagtgaaatctctaagaatttgattgaggaacaatcacagagacaattgatgagcatcttcacc  20812400                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                                                                  --------->GLK1(2)                                                   ------->TEIL  <---------GLK1(2)                                                   <---------ARR14(2)                                                   <-----------ARR10                                                   <---------ARR11(1)                               <---------MYB46(3)  --------->GLK1(2)                             <---                              --------->ALFIN1    <---------CCA1(2)                             <----                              <---------AtMYB61   <---------ARR14(1)                     <------NtERF2                 ---------->DOF2             --------->GLK1(1) --------->LBD16          --------->LBD16  <---------ARR14(2) --------->ANAC58    --------->ANAC58     --------->HSFB2a(2)      --------->DEAR3(1)  --------->ARR14(2) --------->ANAC58    --------->ANAC58     <---------HSFB2a(2)     <---------LBD16 ----->RAV1(2) --------->HSFB2a(2)    <------NtERF2--------->ARR14(2)      --------->MYB52(1)   ----- ----At4g35610 <---------HSFB2a(2) <------ZmHOX2a(1)--------->HSFB2a(1)   ----------->HVH21 ---------   tgtggatacaatggaatcgagaagcgcaagcggtggaggaggcaaggaaatcgaatctttctctccagaatttgcagtaacgggactcgccggagaaaga  20812500                                                                    --------->AHL20(2)                                                                    <---------AHL20(2)                                                                    --------->YAB1                                                                <---------AHL20(2)                                                                --------->AHL20(2)                                                                --------->AHL20(1)                                                               <---------AHL20(2)           --------->ARR14(2)    <------ZmHOX2a(1)             --------->AHL20(2)           --------->GLK1(2)   --------->SPL7              <---------MYB52(1)     --------->ARR14(2)     --------->DEAR3(1)            --------->LBD16           ------>MYB83 ---ZmHOX2a(2)             <------NtERF2                 --------->ANAC46           ------>MYB46(1) -----ARR11(3)           <---------DEAR3(1)              ----------->GT1            --------->MYB52(1) ---->ARR11(3) --------->At4g35610<---------ZAT18        --------->ANAC58         <---------------AGL15 ->DOF2    <---------ARR14(2)<---------SPL7              --------->ANAC58 ----------->GT1          <-   tcatcggtatcggaatccgatgaagagtcgccgtaggacgctctcaatgcttccattgcccgtaaattaattaaaacagaaaaaccaaacagagaaacta  20812600                                                                                              -------                                                                                              <------                                                                                           ------>MYB46(1)                                                                                           ------>MYB83                                                                                        <---------HSFB2a(1)                                                                                        --------->HSFB2a(1)                                                                ---------->DOF2         <---------HSFC1(2)                                                               --------->AHL20(2)       --------->MYB46(3)                                                       <-----------GT1                ------>MYB46(1)                     --------->YAB1                 --------->YAB1    --------->MYB52(1)--------->HSFC1(2)        --------->GLK1(1)*TSS               -------->HAHB4  ------>MYB83              ------>MYB83 <-----------GT1   --------->ANAC58        <---------YAB1   ------>MYB46(1)         <---------MYB59 --------AHL20(2)  --------->ANAC58        --------->ICU4 <---------MYB59        <-----------GT1-----   tttaaaccagatttcattttcaagcataaaccagattaaaccaaaatgattctaatataaccaaattaaagcgaaccgaatataaaccgaaccatccgcg  20812700                                                                        <---------ICU4                                                             --------->ANAC58     <---------ANAC46                                                             --------->ANAC58<---------ANAC58                                                           ---------->DOF2   <---------ANAC58        --------->At4g35610                              <------ZmHOX2a(2)   --------->ANAC55(2)       ----------->RAV1(1)         <------NtERF2        <-----------ARR10    <---------ANAC55(2)    -  ---------->DOF2             ------->GAMYB             --------->ARR11(3)  --------------->AtSPL8  - -->LBD16 ------------>CBF <---------DOF5.7(2)          <---------ARR11(3) <-----------GT1        --- ---HSFB2a(2)              --------->MYB52(1)      --------->DEAR3(1)--------->TOE1(3)            --- ---->REM1(2)            --------->DOF5.7(2)  <-----------HVH21      --------->TOE2(3) --------->AHL20(2)   aagacaaagcagcacaattcggaaaccattaacgggccgagaatgggccttcaccgaagatcaaagcaaaaccctaattacgttccctataaattagaca  20812800                 --------->YAB1       <------NtERF2<---------ICU4      --------->LBD16 <---------YAB1     --------->DEAR3(1)--------->ZAT6    <---------LBD16<---------YAB1  ------->GAMYB  <---------ICU4 --------->MYB46(3)--------->ICU4 ----->MYB83  --------->YAB1                                                                   <----- ----->MYB46(1)  <--------HAHB4                                    --------->YAB1            -------- ------>AtMYB61 --------->ICU4                                    <---------ATHB12          <-------- ------>MYB46(3)<---------YAB1                            <---------MYB52(1)        <----------DOF2   ccaatcgccggaggtttcatcattatcagtattcaatagcatctagggttctcttcttctgttattcaatcgtcgtttttatgggtctttttggatgatt  20812900                                                         <---------LBD16                                                   --------->YAB1                                                  --------->ICU4                                                xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                xxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                xxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                xxxxxxxxxxxxxxxx>smallRNA(i) ------->GAMYB                                                xxxxxxxxxxxxxxxx>smallRNA(se3)                                                xxxxxxxxxxxxxxxxxxx>smallRNA(le3)          <---------ANAC58                                                xxxxxxxxxxxxxxxxxx>smallRNA(si3)           <---------ANAC58                                                xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->LBD16                                           <---------WOX13(1)               --------->MYB46(3) ----WOX13(1)                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->MYB52(1) ->ATHB12         <---------YAB1          <---------ARR14(2)               --------->At4g35610------- -YAB1        <----------DOF2             --------->ARR14(2)               <---------At4g35610<------   gatagtttttaagtttctttataattctctaatcgagagagggagattggcagtgatgactcggaaatttcaagctcaacagaccggaattaggcgtttc  20813000                                            ------>ZmHOX2a(2)                                           <---------At4g35610                                           --------->At4g35610                                          <---------ARR14(2)                                          --------->ARR14(2)                                          <-----------ARR10                                        xxxxxxxxxxxxxxxx>smallRNA(fl3)          <---------ANAC58              xxxxxxxxxxxxxxxx>smallRNA(le3)          <---------ANAC58             xxxxxxxxxxxxxxxxx>smallRNA(se3)         <---------MYB46(3)           <---------At4g35610     --------->ATHB12                 xxxxxxxxxxxxxxxxxx>smallRNA(fl3)     <---------AHL20(2)               --------->LBD16                                <----------DOF2    --------->AHL20(1)                --------->At4g35610                           <---------ANAC58    <---------AHL20(2)              <---------LBD16        <----------DOF2          <---------ANAC58    <---------AHL20(1)              xxxxxxxxxxxxxxxx>smallRNA(s)                    <---------ANAC46    --------->AHL20(2)             xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <---------ANAC58 -->ARR14(2)                       ------->GAMYB       ------>ZmHOX2a(1)        <---------ANAC58 ---ARR14(2)                <---------ETT(2)==================HOX2a_HOX2a<---------YAB1   ttccaatttattggttgagtcgtttctgtgtcgataaccccgctgatctgagccttcctctcttttcatttgattctgatttgtttgcgttttcgaattt  20813100  Previous    Next  AGI:  At5g51170.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN70131.1); contains domain PTHR13522 (PTHR13522) Range:  from: 20811020    to: 20812625    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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