Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->ANAC55(2)                           --------->ANAC46                           <---------ANAC55(2)                           --------->ANAC58 <---------ALFIN1                           --------->ANAC55(1)                           --------->ANAC58--------->ZAT14   <------ZmHOX2a(1)  <----------DOF2      <---------ZAT14                 --------->At4g35610     -- --ZmHOX2a(1)      <---------AHL20(2)      --------->ZAT18         --------->YAB1                  -- ---TOE2(2)    <---------AHL20(2)     --------->MYB46(3)      <---------AHL20(2)         --------->ARR11(3) ---TOE1(2)   <---------AHL20(2) --------->YAB1         <----------DOF2<---------REM1(1) <---------ARR11(3)   atttaggagcctgttttttattttctttcacgtaataacaacaactccactgtctcttctttatttcaatgagaagtagcagaatgaagaagatttatgg  20809000                                                                         <---------DAG2        <-----                                                                  <---------ARR11(3)       <---------ICU4              <---------ANAC58        --------->ALFIN1            --------->ARR11(3)       --------->YAB1              <---------ANAC58  ------>MYB83                      --------->AHL20(1)     --------->ARR11(3)         <---------At4g35610    ------>MYB46(1)                  --------->CCA1(2)   --------->YAB1         --------->ZAT2        ----------->RAV1(1)              <---------ARR11(3)----------->GT1     --------->WRKY18(1)      --------->AtMYB61          <------ZmHOX2a(2)      <---------ANAC58 ------->ANAC58            --------->ZAT6                --------->ZAT14 <----------DOF2--------->YAB1 ------->ANAC58  --------->ATHB12<---------ALFIN1      --------->At4g35610      <---------ANAC58 ----   caagcgagtcaagctgtcttgatttgttaacaccaacacagtgttgaaacttgaaacagatcactagatatattcctttttgtcttgttataatcttgat  20809100   <---------ANAC58   <---------ANAC46                                                          --------->DAG2   <---------ANAC58                                                   ----------->GT1 ----ARR11(3)                                           <---------ARR11(3)  ---------->DOF2    ------ -->ZmHOX2a(2)                                 ------>ZmHOX2a(1) --------->MYB46(3)         <--------   ctattgcttaaaaactcacttcaagaaaaacacagttttgtttagtttcctaatgcaagttctctcaaccgatggaaaaaaagtcaattcgtctaagatt  20809200                                                                   --------->CCA1(2)                                                                   --------->GLK1(1)                                                               <---------ANAC46                                                              --------->At4g35610                                                              <---------At4g35610                                                            <------NtERF2                                                           <---------DEAR3(2)                                                          --------->ETT(1)                      <----        --------->ANAC58                                  <---------DEAR3(1)                <--------        --------->ANAC58                                <-----------HVH21       --------->TOE1(2)    --------->YAB1                                    <---------AtMYB61 ------->TEIL      ------>ZmHOX2a(2) --->CCA1(2)                                   <---------At4g35610--------->ARR14(2)    --------->ARR11(3) -TOE2(3)                                      --------->At4g35610<---------ARR14(2)    <---------ARR11(3)   tgactctcatacccaaaaactattgtattactcaaattgttgaaatttcatctgtattggtcggagcggatatgaatttgcacatacgatgatctcaggg  20809300                                                              <------ZmHOX2a(1)                               ------->GAMYB            <---------DAG2                            --------->MYB52(1)          <----------DOF2                           --------->MYB46(3)         <---------------AGL15                         --------->ANAC46            --------------->AGL15                         --------->ANAC58            <---------------AGL15               --------->DAG2  ----------->HVH21     <---------ALFIN1            --------->ARR11(3)<---------MYB52(2)    ----------------->AGL3                   --------      --------->YAB1 --------->AtLEC2     --------->ANAC58  <---------TOE2(3)             <---------- -------HVH21 ---------->DOF2--------->At4g35610<---------MYB46(3)                     <<<<<<<<<<<<WRKY18 -LBD16 ---------->DOF2  --------->ANAC58 --------->ANAC58  <---------TOE1(3)   ---------->DOF2   tcagaaaatcaaaagataaagtaatgcaaacaactgacacttgtaagcatttgttccactttaaggaatacttcatatgctacaaagtcaaatgtcaaag  20809400                                          <---------ALFIN1                                        <---------ALFIN1                        <----------DOF2                                       --------->ZAT14              ------>ZmHOX2a(2)                                       <---------ZAT18            <---------ARR14(2)                                     *TSS --------->ANAC46        --------->ARR11(3) -->DOF2                           <---------------AtSPL8         <---------ARR11(3)        --------- -HVH21                       <---------ANAC46                    --------->ARR14(2)        <--------   ggagttttgtaatagaaaatttcaaacaagcgtcgtgatggtacacaccttcattgtatattcaactcgatcttctctctctctttcttctgcatcatca  20809500                                                                                                   --                                                                                                 ----                                               ------>ZmHOX2a(2)                                <----                                               ======================HOX2a_HOX2a               ------                                             --------->ARR14(2)                               -------                                     ===================HOX2a_HOX2a                          <------NtERF2                                     ================================HOX2a_HOX2a             <-------                                     ------>ZmHOX2a(2)                                     --------->DEAR3(1)                                    ====================HOX2a_HOX2a                        <---------DEAR3(1)                                    =================================HOX2a_HOX2a          --------->ATERF1(1)                                    <------ZmHOX2a(2)                                     <------NtERF2                                   --------->ARR14(2)                                    <-----------HVH21                                   --------->ARR11(3)                                    <---------ATERF1(1)                                   <---------ARR14(2)                                   <---------ANAC58                                   <---------ARR11(3)                                   --------->bZIP60(1)                                  <---------GLK1(1)                                     <---------bZIP60(1)                                  --------->GLK1(1)           ------>ZmHOX2a(1)         <---------ANAC58          <----------DOF2       <------ZmHOX2a(1)------>ZmHOX2a(1)           <---------ZAT14<-------- >YAB1   <---------ANAC58       ======================HOX2a_HOX2a            --------->ZAT14------>NtERF2 -ICU4   <---------ANAC58<---------At5g28300 <---------ARR14(2)     ------->GAMYB       <---------bZIP60(2)   ccaaaatggatgcttttgagactcatttaccgaaggagatcgtctctgatcctctctataactccttcaacccaaggagtgaagagtatgtcgtcgccgg  20809600                                                                       --------->ATERF1(1)                                                                      <------NtERF2                                                                      <---------At4g35610                                                                      --------->ZAT2                                                                      <---------ZAT2                                                                      --------->At4g35610                                                                    <-----------RAV1(2)                                                                    --------->ATERF1(1)                                                                   <------NtERF2                                                                   <---------At4g35610  --------->GLK1(2)                                                --------->At4g35610 --------->ARR14(2)                                                --------->ATERF1(1) <---------ARR14(2)                                               ------>NtERF2 <---------ARR11(3)                                               <---------RAP2.3(1) --------->ARR11(3)                                             <---------LBD16 <---------GLK1(2)                                              --------->At4g35610 --------->ARR10                                             ----------->RAV1(2) ------>DOF2                                                 --------->At4g35610 --NtERF2             <----------DOF2                        --------->ZAT2 --->LBD16     <-----------HVH21                             <---------At4g35610 -->LBD16   <---------At4g35610                             ------->TEIL--------->RAP2.6(2) --LBD16    <------NtERF2  <---------ANAC46   <-----------GT1<---------ZAT2                        <- -ATERF1(1) --------->At4g35610      --------->MYB52(1)  --------->AtLEC2--------->LBD16<-----------HVH21   aaagattctcaggcagcggtcagtctttgacttggacaaaaacgggtttagccctcttcatgcagctgcggcagccggacaagtagagactgtgagggca  20809700                              ---------->DOF2                         <---------At4g35610                         ------>NtERF2                         --------->At4g35610                       <---------RAP2.6(2)                         --------->ICU4           ---------->DOF2 <----------DOF2                  ------->MYC3       <--------P<---------HSFC1(2)                         <-------MYC3      <-------GAMYB<----------DOF2                     <---------------AGL15      <------------------     <---------MYB46(3)---------->ID1                  --------------->AGL15----------->GT1 ---------DOF2   --------->HSFC1(2)--------->CCA1(2) ------>ZmHOX2a(1)     ----------->GT1   actttgggggttgaaaagaagctttgccgcttaaaagatagagatggaaagactcctctacatgtggcaacgatgagagggaaaatcgatgtgatcagag  20809800                   <---------WOX13(1)                  <---------ANAC58                  <---------ANAC58                 --------->ATHB12                <---------YAB1             --------->ALFIN1         --------->ZAT2         <---------At4g35610                  --------->WRKY18(1)         --------->At4g35610             <---------TOE2(1)       --------->ZAT18                  --------->SPL7                              <------ZmHOX2a(2)      <---------ANAC58                <---------SPL7   <----------DOF2     ------->TEIL       -------      <---------ANAC58              --------------->AtSPL3         <----------DOF2  <---------------- ---WRI1 <---------ZAT2           ------------------>SPL14  ------->TEIL <---------ZAT18    <--------   agattgtagcgagctgtgttgattgtttagaagacgagaccgtacaaggtcaaactgctttgcatcttgctgttctgcacctagagatcgaagcagtcat  20809900  Previous    Next  AGI:  At5g51150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G34630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62239.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70133.1); contains domain PTHR12459 (PTHR12459) Range:  from: 20806210    to: 20809034    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g51160.1    Description:  ankyrin repeat family protein. similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G10720.1); similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G10720.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO62238.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 20809437    to: 20811067    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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