Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                ---------->DOF2                                                          --------->LBD16                                                          ----------->HVH21                         -                                     <------ZmHOX2a(1)   --------->DEAR3(1)         <-----------RAV1(2)                                   <---------ANAC46     <---------LBD16        --------->ANAC46    <-                            <---------ANAC58          --------->DEAR3(1)       --------->ANAC58    --                            <---------ANAC46       <---------ICU4              --------->ANAC58    -- --------YAB1               <---------ANAC58    --------->bZIP60(1)       --------->REM1(2)        <- ------>AHL20(2)          ------->TEIL   <---------GLK1(1)<---------SPL7  --------->ZAT14  <---------ZAT14   ttttatactaagagagaaatagtataagtaccttgtggaggagagttctggcatcatcgccggacaaaggaggctgtgaagacgaaacaggggaacactg  20796300                                     --------->ARR14(3)                                     <---------ARR14(3)                                     --------->ARR11(3)                                     <---------ARR11(3)                            <------MYB46(1)                            <------MYB83                            ----------->GT1                           --------->MYB46(2)                           --------->MYB59                          <---------MYB55(1)                         <---------MYB52(1)         <----------ID1<---------ANAC58                                                             - -------->TOE1(2)      <---------ANAC58                                                            <- --------ZAT2          <---------ANAC46                                                           <-- ------->At4g35610    <-------TEIL   --------->GLK1(2)               <----------DOF2             ---- ------->ZAT2  --------->MYB52(1)--------->YAB1      <----------DOF2 <---------DAG2    --------->ANAC58 --------At4g35610 --------->At4g35610      <---------At4g35610   <---------ALFIN1     --------->ANAC58   aagctgggagagagacaaaacagatgcgtttggtatcaaaatcttgtgctcagtgctttggcatcccaacactttatctccgaattgactcgctatctcc  20796400                                            <-----------RAV1(2)                                          ------>NtERF2                                          ----------->RAV1(1)                                         --------->ANAC46                                       ------>ZmHOX2a(1)             ------->GAMYB --------->At5g28300                                      --------->TOE2(2)          --------->WRKY12<---------TOE2(3)                                      --------->TOE1(2)          --------->WRKY38(1)<---------MYB52(1)                                     ----------->RAV1(2)        --------->DOF5.7(2)<-------GAMYB                                     =================RAV       <---------MYB52(1)----------->GT1        <-----------HVH21          --------->GLK1(2)        <---------At5g28300  <---------TOE1(3)   <--------P       --------->LBD16--------->ARR14(2)      <---------WRKY38(1)  <---------At5g28300 -------->LBD16--------->At4g35610 --------->ARR11(3)     ----------->HVH21   <---------ZAT14 --------ANAC46<---------GLK1(1)   <---------ARR14(2)    <-----------HVH21    <---------ARR14(2) <--- -------LBD16  <---------ZAT2 --------->ANAC58         --------->LBD16    <------NtERF2    ------>ZmHOX2a(1) -->ZmHOX2a(1) --------->ZAT2 --------->ANAC58       <---------LBD16--------->DEAR3(2)--------->KAN4(2)   tccgggtaagggtcacgagctccgaagtcaccaagaaaatcctgcgccagattagaccgggtcaccgttaaccggccgagtttacggttattcctactta  20796500                                                                                                  <--                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                           <---------bZIP60(1)                                                                                           --------->bZIP60(1)                                                                                           <---------bZIP60(2)                                                                                           <---------ANAC46                                                                                           <---------TGA1a                                                                                           <---------ANAC55(2)                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                           --------->ANAC55(2)                                                                                           <---------O2                                                                                           --------->TGA1a                                                                                           --------->O2                                                                                          -----------                                                                                         <---------TGA2(2)                                                                                        ----------->TGA1                                                                                     <---------YAB1                                                                                 <------NtERF2 ------                                                     --------->ALFIN1           <---------MYB46(3)---                                                    <------ZmHOX2a(1)----------->GT1 --------->ICU4                       <---------TOE2(3)          --------->ALFIN1  --------->ARR11(3)--------->YAB1              ------>MYB83                       <------ZmHOX2a(1)  <---------ARR11(3)<---------ICU4              ------>MYB46(1)              <---------LBD16       <------NtERF2 <---------DEAR3(1)----         <-----------GT1 <------ZmHOX2a(1)--------->MYB52(1)    --------->LBD16<---------ANAC46<-----  ----------->GT1      <---------TOE1(3)  <---------WRKY18(1) <---------LBD16 <---------ABI4(1)------ --------->ALFIN1  <---------DAG2        --------->WRKY12  <------ZmHOX2a(1)--------->ANAC46 -------- --------RAV1(2)   <----------DOF2       ----------->HVH21----------->HVH21<---------LBD16-----------   caggtggtaataaaccgaacactttaaggattgagcgagaaggttgacggaggaggagggaggacgcggagatgttacacggcggtgatgatgacgtggc  20796600        --------->ZAT2        <---------At4g35610 ----NtERF2 -->NtERF2 -----DEAR3(1) -----RAP2.6(2) ---->ATERF1(2) -----ATERF1(2) -----ANAC58 -----ANAC58 -----ANAC46                                                                                     <--- >STF1  --------->At4g35610                                                                      ---- --->RAP2.6(3)                                                                                   <--- --->NtERF2                                                                        ----------->GT1 -- ----->RAP2.6(2)                                                             <---------ZAT14     <--- -NtERF2<---------ZAT2 --------->ZAT14                                       --------->ZAT14     <--- --->ATERF1(1)         <---------ZAT14                                   --------->AtMYB61      <---- ->ALFIN1 ----------->GT1------->TEIL     <---------AtMYB61             <---------ZAT14      <------- >bZIP910(1)----------->ARR10    --------->CCA1(2)                      --------->ZAT14   *TSS  -----   ggccatcgggagctgtgatttgctctgtaccgaagataagagttttggtttttagagagcgaaacgattttcagaccactggactgagttaaatgggtga  20796700                                                              <-----------TGA1                                                             --------->O2                                                             --------->ANAC55(2)                                                             --------->bZIP60(2)         --------->ICU4                                      --------->TGA1a         <---------ATHB12                                    <---------O2    --------->ANAC46                                         --------->ANAC58    --------->ANAC58                                      <---------REM1(2)    --------->ANAC55(1)                                ================bZIP_DOF    --------->ANAC55(2)                              ------>MYB83    <---------ANAC55(2)                              ------>MYB46(1)    --------->ANAC58                               --------->DREB2C(2)    --------->O2                                   <---------MYB59    --------->bZIP60(2)                           --------->DEAR3(2) <------NtERF2                                  --------->TCP20----------->HVH21 ------At4g35610                                <---------PCF2<-----------HVH21 ----->At4g35610                            <---------LBD16  --------->ANAC55(1) ------ANAC58                              <---------ANAC58  <---------TGA1a                     ---- ------->ALFIN1            --------->PCF2  <---------ANAC58  --------->ANAC58                   >>>>> ------bZIP60(2)     --------->MYB52(1)    <---------ANAC46  --------->ANAC46                  ------ ------ANAC58   --------->ICU4          ===============================bZIP_DOF               <------ -----AtMYB61   <---------ATHB12        <----------DOF2<----------DOF2                    <---------ANAC58 ----HVH21    <---------ICU4   ------------>CBF --------->TCP15(1)<---------ANAC55(2)     <---------ANAC58 ---->ALFIN1  --------->YAB1 --------->MYB46(3)----------->HVH21  --------->ANAC55(2) <------------CBF   ggtgccacgtaatcactaatgactaatgggaaccacaataaactttcgtgggaccgactttacacgtcacgttttaatctgagaagcccattgggtttga  20796800                                                                      --------->TOE2(3)                                                                      <----------DOF2                                                                   <---------ARR14(2)                                                                   --------->ARR11(3)                                                                   <---------ARR11(3)                                                                   --------->ARR14(2)                                                                  <---------GLK1(1)                                                                  <---------CCA1(2)                                                          <----------DOF2                                                          ------>ZmHOX2a(1)                        <---------ARR14(2)                <---------DAG2               <---------DAG2                            <---------------AGL15               <----------DOF2                           --------------->AGL15            --------------->AGL15                ---------->DOF2<---------ANAC58            ==============================================================MADS_MADS            <---------------AGL15               --------->LBD16 <---------ANAC58         ------>MYB83           ----------------->AGL1        --------->ICU4 <-----------------AGL2           ------>MYB46(1)           <-----------------AGL1        <---------YAB1 ----------------->AGL1         --------->AtMYB61   <----------DOF2      --------->ARR14(2)<---------ICU4----------------->AG          --------->HSFB2a(1) ----------->AtSPL8     ------->TEIL   --------->YAB1   <-----------------AG          <---------HSFB2a(1) >>>>ARR2  <---------ZAT18         <---------ARR11(3)   <-----------------AGL1    <---------MYB52(2) --->ATHB12--------->ZAT18         --------->ARR11(3) <---------ARR14(2)<---------AHL20(2) ---YAB1   <-----------------AGL2<---------TOE2(3)    --------->ARR14(2)--------->AHL20(2)      <----   ttgtacttttgtgtccacttttggtgaatctacttaagatttcataattccgaaagtatcctttttgggtatctttaattacaaacaaaccttcccttct  20796900                                                                                          <---------ZAT14                                                                                          --------->ZAT14                                                                                          <---------ZAT18                                                                                          --------->ZAT18                                                                   --------->CCA1(2)    ------->PIF5                                                         ------>NtERF2                  <-------PIF5         --------->ANAC58                     --------->ANAC46    <---------ARR11(3)   --------->LBD16         --------->ANAC58                   <---------DOF5.7(2)   --------->ARR11(3)   <---------DEAR3(2)      *TSS                               <----------DOF2--------->DEAR3(1)            <---------DREB2C(2) --------->LBD16                     ---------->ID1  <---------DEAR3(1)               <---------DEAR3(1) ------DOF2            --------->LBD16   <---------DAG2<------NtERF2          ---------->DOF2   ttcccgatttcaagccctaaaattccgagacttctgtttctcgctttaacgacagtcgccgagtgagagatatagagagagaaagatgccggtgcacgat  20797000                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              <------                                --------->LBD16                                               -------                               <---------HSFB2a(2)                                            -------                               <-----------RAV1(2)                                            -------                               <---------------AGL15                                          -------                             ------>ZmHOX2a(2)                 <---------------AtSPL8         <------NtERF2                            ==================HOX2a_HOX2a --------->ANAC58                    -------                           <---------ARR11(3)             --------->ANAC46                    -------                          <---------GLK1(1)               --------->ANAC58                  ---------                          --------->GLK1(1)               --------->ANAC55(1)             <---------HSFB2a(1)                    --------->ALFIN1                      <---------ANAC55(2)             --------->HSFB2a(1)                  <---------ANAC46                        --------->ANAC55(2)             --------->HSFC1(2)                <---------ZAT14--------->HSFB2a(2)     --------->ARR11(1)         <------NtERF2------                --------->SPL7----------------->AGL1   <---------ARR14(2)        --------->LBD16<----              <---------SPL7<------ZmHOX2a(2)          --------->ARR14(2)       <---------DEAR3(1)---             --------->ALFIN1=================HOX2a_HOX2a<---------LBD16        <---------ANAC46-----           <---------ANAC46--------->ARR11(3)     --------->At4g35610          <---------LBD16-------           <------------------SPL14    <------ZmHOX2a(1)--------->CCA1(2)    --------->ANAC46<-------   gagcaagagcatgaggtgtacggtggagagatcccagaagaggaagaaggtgagatggatacggaagagtacgaagaacacggcggagaagaaggtgccg  20797100     --------->At4g35610     <---------At4g35610   <------NtERF2  --------->LBD16 --------->DEAR3(1) ---------LBD16 ------NtERF2 -------->RAP2.3(1) -------->ATERF1(1) --------ATERF1(1) ------->ABI4(1) ---->NtERF2 ------>RAP2.3(2) ------>RRTF1(3) -------DEAR3(1) ------>DEAR3(1) -------ATERF1(2) ------>RRTF1(2) ------>ATERF1(2) ----->RAP2.3(1) ----->ERF1 ----->RRTF1(1) ----->DEAR4(2) ---NtERF2 ----->ORA47(2) ----->ATERF1(1) ----->RAP2.6(1) ---->DREB2C(1) -----RAP2.3(1) -----DREB2C(1) -----ATERF1(1) ---->ABI4(1) ->NtERF2 ----ATERF1(2) --->RAP2.3(2) --->RAP2.3(3) --->DEAR3(1) ---RAP2.6(2) -->ERF1 -->DEAR4(2) -->RAP2.6(1) -->ORA47(2) -->ATERF1(1) -->RAP2.3(1) >ALFIN1   <------ZmHOX2a(1) --->ATERF1(2) -----At4g35610 ------>RAP2.3(3)                           <---------YAB1             <-----------GT1              - ---->At4g35610                   --------->STY1(1)                <----------DOF2                  < -->DEAR3(2)        ----------->RAV1(2)   ----------->GT1       <-----------GT1                   <-- --ATERF1(1)       ------->TEIL--------->ZAT6                   <---------AHL20(2)               <---   ccgccggagatgaggagcttgaacctggctctagctctagggtattgtgattcttcgatctataatttacttttatccaattgagactcttcttattttt  20797200  Previous    Next  AGI:  At5g51110.1    Description:  similar to dehydratase family [Arabidopsis thaliana] (TAIR:AT1G29810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62291.1); contains InterPro domain Transcriptional coactivator/pterin dehydratase (InterPro:IPR001533) Range:  from: 20795358    to: 20796690    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g51120.1    Description:  ATPABN1/PABN1 (polyadenylate-binding protein 1); RNA binding / poly(A) binding / protein binding. similar to polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] (TAIR:AT5G10350.1); similar to polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] (TAIR:AT5G10350.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO62247.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 20796906    to: 20798756    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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