Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------ANAC55(2)                                                 <---------ANAC46                                                 <---------ANAC58                                                 <---------ANAC55(1)                                                 --------->ANAC55(2)                                                 <---------ANAC58                                                ------->TEIL                                                --------->SPL7                                              <---------SPL7                               --------->LBD16                                       <-----------RAV1(1)                                --------->LBD16                                   --------->ANAC58                                     <---------LBD16                                   --------->ANAC58                          --------->GLK1(2)                                   --------->ANAC46                          <---------ARR14(2)                                <---------WRKY38(1)                          --------->ARR14(2)  <---                                <-------TEIL <---------ANAC58            --------->At5g28300<--------                          <---------MYB52(1) <---------ANAC58         <---------At4g35610 <---------TOE1(2)                         <-----------HVH21   <---------ANAC46         --------->ZAT2--------->GLK1(1)                        <---------ANAC46    <---------------AtSPL3    --------->At4g35610<---------LBD16                        <---------ANAC58    <------NtERF2             <---------ZAT14<---------ARR14(2)                      -------->P<---------WRKY12<-------TEIL          --------->ZAT14--------->ARR14(2)                      <---------At5g28300   --------------->AtSPL3    <---------ZAT2<---------GLK1(1)      --------->ARR14(2)<---------ANAC58   ------>NtERF2  ----------->HVH21  ------->TEIL--------->LBD16   agagactgtatcgtcttgtacatctaccgtgaggtccacgtatggtgccgtacgtgttctctgactgttctcagcagtgaatctggagttccccggtttt  20779300                                            --------->LBD16                                            ------>NtERF2                                   --------->At4g35610                          --------->ATHB12 <---------RAP2.6(2)                   <---------ALFIN1<------NtERF2<---------At4g35610                   --------->AtMYB61    --------->ARR14(2)         <---------MYB46(3)        <---------At4g35610                 ------>ZmHOX2a(1)     <---------DEAR3(1)<---------At4g35610<---------LBD16              ----------->HVH21     ------>ZmHOX2a(2)--------->DEAR3(1)<---------ARR14(2)  <---------ZAT6 ------YAB1       --------->MYB46(3)<---------MYB52(1)<---------At4g35610<<<<<<<GRF7 -MYB52(1)    <---------WOX13(1) --------->ZAT18--------->At4g35610  ----------->RAV1(2)--------->ZAT6   ttatagatcggtggtaattgaccaccgctcattggtccgctgtttccggcttctgcatcagagtgatagcctcctgacacttcaaaactcactctagaca  20779400                                   --------->At4g35610                                   ------>NtERF2     ------>ZmHOX2a(2)                                   <---------At4g35610                                  --------->DEAR3(1)--------->GLK1(1)                                 <------NtERF2  --------->LBD16                                 --------->RAP2.3(1)<------ZmHOX2a(2)               --------->TOE2(3)<---------RAP2.3(1)--------->ARR14(2)             -------->P         ------>NtERF2  <---------LBD16         --------->ANAC58       <---------ATERF1(1)<---------ARR11(3)         --------->ANAC46      <---------DEAR3(1)  --------->ARR11(3)         --------->ANAC58      --------->DEAR3(1)  <---------ARR14(2)             --------->GLK1(2)   <-----------GT1           <-----------HVH21<---------LBD16             --------->YAB1   --------->ETT(2)  <-----------GT1       <-----------GT1      <---------At5g28300         --------->ICU4---------->ID1   ttttttaacacactctacctgaaaattttctcgtcgccgctaaatttcaccgggatctcaaacaagagacacaaaatgatgaagaatttgttgtctactg  20779500                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                             --------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                      --------->LBD16      <---------ANAC46                         <----------DOF2                             --------->LBD16       --------->HSFB2a(2)                         <---------DAG2                             <---------HSFB2a(2)    <---------HSFB2a(2)            <---------GLK1(2)                                       --------->HSFB2a(2)    <---------LBD16         --------->HSFB2a(2)       <------ZmHOX2a(1)               <---------LBD16        <---------LBD16 <---------AtMYB61 --------->ZAT6 ----------->GT1--------->ANAC46<-----------GT1    --------->GLK1(2)   gttatggtcttatggaatctctcactacttttttagaggaaaattttgtaaacgcagagacaacatttttcccgagaaaatgagagaatttttccgggaa  20779600                                              --------->ICU4                                           --------->AHL20(2)                                         --------->ANAC58     <---------TOE2(3)                   --------->ANAC58                              --------->ZAT14 ------>AHL20(1)                   ============================HOX2a_HOX2a     --------->AHL20(2) -------AHL20(1)                   ------>ZmHOX2a(2)                           ----------->TBP -------ARR11(3)                  =============================HOX2a_HOX2a ----------->GT1 ------>ARR11(3)                  <------ZmHOX2a(2)                        <---------ANAC46 ->LBD16                         <---------ARR11(3)      *TSS           <---------GLK1(2) -HSFB2a(2)                      --------->ARR11(3)     <------ZmHOX2a(1) <-------TEIL <---------ZAT14 >HSFB2a(2)            ---------->DOF2   --------->ANAC55(2)            <---------ARR14(2) >LBD16    <---------YAB1    <---------DOF5.7(2)  <---------YAB1        --------->ARR14(2)       ----   aatatttgatgttattcttctctctgaaagtaaacgatctctcaagtaatttttgataggagaatgagaaaatggattcgtataaatagtgaagagaaga  20779700                                --------->ALFIN1         <-----------HVH21                              <---------bZIP60(2)     <----------DOF2                              <---------ANAC46      ------>MYB46(1)                              <---------O2  --------->PCF2                              --------->O2 <-----------TCP11(1)                              <---------ANAC58    --------->MYB46(3)                              <---------ANAC58    <---------MYB111(1)                              ===================================bZIP_DOF          --------->GLK1(2)   <---------TGA1a     <---------MYB111(2)           <-----------GT1     ===================================bZIP_DOF  <---------ALFIN1         --------->AHL20(2)     ---------->DOF2          --------->TGA1a     --------->AtMYB61       <---------ARR11(3) ----------->GT1  ---------->DOF2   --------->ETT(1)------>MYB83          --------->AHL20(1)       <- ----->CCA1(2)    ======================bZIP_DOF --------->MYB46(3)       <---------AHL20(1)       <-   gacgagtaaaagaatttgaataaagaagagagacgtggtcggacttggcccaccaactttgtcatctatgatgcaaaatatttaacaaataacaactaat  20779800           <-------TEIL                                    ---------->DOF2        <---------ANAC46                             --------->ANAC46        <---------ANAC58                       --------->AHL20(1)        <---------ANAC58                       --------->AHL20(2)                     <---------AHL20(2) --------TOE1(3)                       <----------ID1--------->ANAC55(2)   --------->ZAT6        ---- --------TOE2(3)--------->YAB1   ----------->GT1<---------YAB1             <-----------GT1  <--------   tgaggttgtaacgtgcatttgtaatgcaatacattgagaaaaaaacaaatattatacataacaaagttgagtttttttcactagttgtttatttaagaat  20779900                                                                  --------->ATHB12                                                                  <---------AHL20(2)                                                                 <---------AHL20(2)                                                                 --------->AHL20(2)                                                                <---------YAB1                                                              <---------ICU4                                                              -------->ATHB1                                                             <---------YAB1                                                             --------->AHL20(1)         --------->ZAT14                                     --------->AHL20(2)         --------->ZAT18                                     <---------AHL20(2)         <---------ZAT18                                     --------->ICU4        >>>>>>>>>>>>>>>>>LFY                              <---------AHL20(2)           <---------ANAC55(2) ----->YAB1          <-----------GT1                      --------->AHL20(2)           <---------YAB1 -TOE2(3)<---------ZAT14    <-------TEIL             <---------AHL20(2)           <---------ICU4   tagaacaatagtccactgttttttaacaagtccatagcgaatgttggaaacttattttaaaaaattattaattggaagtctaaagaattacgaaaacaaa  20780000                                                                         ---------->DOF2                                                                    --------------->AGL15                                                                    <---------------AGL15                                                                   <-----------------AGL2                                                                   ----------------->AGL3                                                                   ----------------->AGL2                                                                 ------>ZmHOX2a(1)              ---------->DOF2     ---------->DOF2              ------>ZmHOX2a(2)                 ----    <---------AHL20(2)         --------->AHL20(2)            <---------ARR11(3)         ------->TEIL   <---------------------WRI1  <---------AHL20(2)            --------->ARR11(3)      --------->AtLEC2   ttgtatttgattaaaacaaagtacaaattgcatttaaaaagaaatagtctatagaacatggatgatccttccatataaagtttgatcatgcacatagtat  20780100                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                             --------                                                                                             <-------                                   --------->At4g35610                                      <--------                            ------->TEIL                                                    <--------                            --------->GLK1(2)                                               <--------             <---------ANAC46      <---------At4g35610                                     ----------         ---------->DOF2   <---------CCA1(2)                                               <---------       ---------->DOF2  --------->At5g28300                                                ----------   <---------ICU4    <---------At4g35610                                                ------->TEIL   --------->YAB1    --------->At4g35610                                          <---------AHL20(2)  --------->ICU4   <---------GLK1(1)  --------->At4g35610                  ----------->GT1 <--------- ----->YAB1  --------->ALFIN1  <----------DOF2                 <---------YAB1    --------->AHL20(2)   gacaataatcaaagagcggggatagctgtgaatctttagcagcgaaaacttcaaacatatatttcatgaatacaacaatgttataaaatgaatttcgtac  20780200  Previous    Next  AGI:  At5g51060.1    Description:  RHD2 (ROOT HAIR DEFECTIVE 2). Identical to Respiratory burst oxidase homolog protein C (RBOHC) [Arabidopsis Thaliana] (GB:O81210;GB:Q5VI40;GB:Q8GZ82;GB:Q9FI42); similar to RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D) [Arabidopsis thaliana] (TAIR:AT5G47910.1); similar to respiratory burst oxidase, putative / NADPH oxidase, putative [Arabidopsis thaliana] (TAIR:AT4G25090.1); similar to ATRBOHA (RESPIRATORY BURST OXIDASE HOMOLOG A), FAD binding / calcium ion binding / iron ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G07390.1); similar to NADPH oxidase [Nicotiana tabacum] (GB:AAM28891.1); similar to respiratory burst oxidase homo Range:  from: 20774510    to: 20779657    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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