Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->ARR11(3)         <-----------ARR10                           <---------WOX13(1)                            <-    ---------->DOF2                                --------->ATHB12     --------->AHL20(2)         <- -------CCA1(2)                                    <---------ICU4       <---------AHL20(2)   <------- ----MYB52(1)   <---------AtLEC2                  <---------YAB1    --------->ICU4           <------- --->GT1 <---------ARR11(3)   <-------TEIL        --------->ICU4 <---------ZAT6<---------STY1(2)<----   atatctgaaagtatctctgcatgggttttacatacatctatatagaattgccatgattgtttttgtagtgatatttatattagctaggcctatattttct  20746400                            <---------YAB1                           --------->AHL20(2)                           --------->AHL20(1)                                         <---------WOX13(1)                     --------->TOE2(3)                                             --------->ICU4                    --------->ANAC58                                          --------->ANAC46                    --------->ANAC55(2)                                     --------->ANAC46       ------>ZmHOX2a(1) --------->ICU4                                  <---------ZAT18   ---------->ID1   <---------ANAC55(2)                                  <---------ZAT14 --------ANAC58     ----------->GT1                                      --------->ZAT14          --- --------ANAC58     --------->ANAC55(1)                                --------->At4g35610     ------ --AHL20(2)         --------->ANAC46                                 <---------ICU4<---------YAB1---- ----GT1            --------->ANAC58       <---------HSFB2a(2)      <---------ATHB12--------->ATHB12- ------DOF2   <-------TEIL<---------ICU4   --------->HSFB2a(2)    --------->WOX13(1)-------->HAHB4---   ttcttgttcctatagatgcaatacgtaaatattatagaaatgtttttagaacaagtagtaagacatttcaatcagttcacacaaaatgattgaatgaaaa  20746500                                            <------NtERF2                                            <---------At4g35610                                            --------->At4g35610                                           ------>NtERF2                                    --------->CCA1(2)                                   --------->ARR14(2)                                     --------->ANAC58                                   <---------ARR14(2)                                     --------->AtLEC2                                   --------->ARR11(3)                                     --------->ANAC58                                   <---------ARR14(3)                          --------->YAB1                                   --------->ARR14(3)                       ----------->RAV1(1)   --------->YAB1                  <---------ARR11(3)                    --------->HSFB2a(2)   <---------AHL20(2)              <---------AHL20(1)                    <---------HSFB2a(2)   --------->AHL20(2)              --------->AHL20(1)                 <---------ARR14(2) <-------MYC3 ------>AHL20(2)            <---------WOX13(1)                        --------->ARR14(2) ------->MYC3 --->AHL20(2)             --------->ATHB12<---------RAP2.3(3)      <---------ICU4 <---------AHL20(2) ----->YAB1  --------->At4g35610 --------->ANAC58                 <---------ATHB12---------->DOF2 --- -------->YAB1           <---------YAB1  <---------ANAC46  ----------->GT1 --------->ANAC46       --- ------>AHL20(1)   <---------YAB1--------->ANAC58         <---------------AtSPL8  --------->AHL20(2)   aataataatataaacagctatctgattgtgattgcaagatattgggggcagacaattaagagagtacaatcagttccacaacaataaatcacatgcaaac  20746600                                              <---------ALFIN1                                             <---------REM1(2)                                    <---------ZAT2                                    --------->TGA1a                                    <---------O2             <---------YAB1         <---------At4g35610    --------->REM1(2)            --------->AHL20(2)      --------->O2        <---------ANAC55(1)         <---------GLK1(2)          --------->ZAT2  --------->YAB1         <---------ARR11(3)         --------->At4g35610 <---------ANAC58         --------->ARR11(3)         <---------TGA1a<-------TEIL --------->CCA1(2)                   - =============================================bZIP_DOF  --------->ANAC55(2)               <---------MYB46(3) <----------DOF2                  <-----------RAV1(2)   <---------ANAC55(2)               ----------- ------>ANAC58          <---------ALFIN1<------NtERF2   <---------ANAC46                 --------->ALFIN1 ------>ANAC58        <---------ALFIN1--------->ALFIN1  <---------ANAC58     --------->YAB1        <-   aagcttttatagatttttatagacccacacttcttctcaggtggctctacacattcatacgtgtagataagagtttgaataataagttgaagtggttaat  20746700              --------->AHL20(2)      <--------P                 --------->AHL20(1)    <---------MYB46(3)           <---------AHL20(2)    <------MYB83                 --------->AHL20(2)    <------MYB46(1)             --------->AHL20(2)  <---------WOX13(1)<---------HSFB2a(2)                         ---------->ID1                  ----- -------->ATHB12    --------->HSFB2a(2)<---------ANAC55(2)      <---------CCA1(2)        <-------PIF5 >GT1 <---------WOX13(1)  --------->YAB1                  ------->TEIL         --------->ZAT6  <----- --------YAB1 <---------AHL20(2)<---------AHL20(2) --------->AHL20(2)      <-------TEIL  ------->PIF5   tctgattggttgatatttaaatctcgaagaataattttattacttaaaaaaaaaaaaatgaaacttgtctcttcagtttcatcactagcctcgtgctcca  20746800                                                      <---------YAB1                                                    <---------ICU4                                                   <---------YAB1                                                   --------->ICU4                                                 <---------ICU4                                      *TSS      --------->ICU4                                     <---------AHL20(2)          --------->ARR11(3)         --------->AHL20(2)          <---------ARR11(3)         <---------AHL20(1)      ---------->DOF2           ------------>CBF<---------YAB1                                      - ------>RAV1(1)          --------->LBD16      --------->YAB1          <-------MYC3           <------- ----ALFIN1         <---------GLK1(1)--------->AHL20(1)               ------->MYC3           --------   ccattagacaaagacattttagaactccgaaaatgtcaataaaatggatgatgattatgagaaaaacttacacgtttaataggcccgaagttgctatcta  20746900                                                                    --------->ANAC55(2)                                                                    --------->ANAC46                                                                    --------->ANAC58                                                                    --------->ANAC55(1)                                                     ------->TEIL   --------->ANAC58                                                     --------->ARR14(2)        --------->ANAC46                 <----------DOF2                     <---------ARR14(2)        --------->ANAC58  <---------REM1(1)                               <---------ANAC55(2)          --------->ANAC58 -------->At4g35610----------->HVH21              --------->ANAC55(2)        ---------->DOF2 --STY1(2)     <------NtERF2               ----------->GT1          <---------ANAC55(2) ->STY1(2)   <---------RAP2.6(2)     <------ZmHOX2a(1)   --------->LBD16  ------->GAMYB   gcagttgtagccatggccgctttgacaatgcagtttgaaggagagaagaaaaacgtatccgaagttgcagacgtaaccctcaagcaagaagatgaacaac  20747000                    <------NtERF2                    ----------------->AGL1                   ------>NtERF2                                                          <----------                  --------->ANAC46                                                      <----------DOF2                  <---------DEAR3(1)                                                  <---------RVE1(1)                  --------->DEAR3(1)                                                  <------ZmHOX2a(2)         ------>ZmHOX2a(2)                                                           <-----------ARR10        <------ZmHOX2a(2)                                                            <---------ARR14(2)       <---------AGP1<---------ANAC46                                <---------MYB52(1)------>ZmHOX2a(2)       --------->ARR11(3)                             <------ZmHOX2a(2)              --------->AGP1       <---------ARR11(3)                            <---------ARR14(2)              <---------AGP1       <---------ARR14(2)                            --------->ARR14(2)              --------->ARR14(2)       --------->ARR14(2)                   <----------DOF2    <---------ANAC58      --------->ARR11(3)      <---------CCA1(2)                 <---------ALFIN1       <---------ANAC58      <---------ARR11(3)     ----------->ARR10 <---------MYB52(1)  <---------DAG2   <---------ARR11(3)      <---------CCA1(2)   aagaacgtagatcttattcgacgccgtttagggaagagagagacacctttggcccgatccaagttccttccgataagttcggaatcagatctttacgata  20747100                                                                          --------->ANAC58                        <---------GLK1(2)                          <---------At4g35610                      <---------AHL20(1)                           --------->At4g35610                      --------->AHL20(1)         <---------ANAC46  <---------ZAT14                      --------->ARR11(3)   ---------->ID1          --------->ZAT18               <---                      <---------ARR11(3) <-----------RAV1(1)  <---------LBD16      ------>ZmHOX2a(2)                 ----------->GT1     <---------AHL20(2)  <---------GLK1(2)--------->ANAC58       ----           ------>ZmHOX2a(2)        <---------YAB1  <-----------HVH21  --------->DEAR3(1)  --------->ARR14(2) -GT1    --------->ARR11(3)        --------->AHL20(2)   <---------At4g35610       <------ZmHOX2a(2)   tatatcgttctgatctcgagggaaaatattctcacatttttatttgttgttctgtgtcagattatggggagcacagacgcagagatcgcttcagaacttc  20747200        ----------->HVH21                   <----------DOF2        --------->WRKY38(1)         <---------SPL7      <---------MYB46(3)            --------->TOE1(2)             --------->At4g35610   <------MYB46(1)                  <-----------HVH21             <---------At4g35610   <------MYB83                   <---------ATHB12   <---------ANAC46                 ---------->DOF2  <---------AtMYB61              ------>MYB46(1)     <---------ANAC58    <---------TOE2(3)       ---- ------HSFB2a(2)                 ------>MYB83  <---------AtMYB61 --------->ALFIN1     --------->ZAT14 ----->HSFB2a(2)              --------->MYB46(3)     <---------ANAC58------>NtERF2    <---------ZAT14   gagattggtggtgaccgcgagcgaatgcccgaaccaatcgtccgagcttttggtgtcttgaagaaatgtgctgccaaggtttttgcagtaaagtctctta  20747300  Previous    Next  AGI:  At5g50950.1    Description:  fumarate hydratase, putative / fumarase, putative. Identical to Fumarate hydratase 2, chloroplast precursor (FUM2) [Arabidopsis Thaliana] (GB:Q9FI53;GB:Q8VY72); similar to FUM1 (FUMARASE 1), fumarate hydratase [Arabidopsis thaliana] (TAIR:AT2G47510.1); similar to FUM1 (FUMARASE 1) [Arabidopsis thaliana] (TAIR:AT2G47510.2); similar to Fumarate hydratase 1, mitochondrial precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95833.1); similar to fumarase [Solanum tuberosum] (GB:CAA62817.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40057.1); contains InterPro domain L-Aspartase-like; (InterPro:IPR008948 Range:  from: 20746838    to: 20750742    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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