Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         ---------->DOF2                            --------->ANAC58                            --------->ANAC46                <-------TEIL--------->ANAC58                                                  -------              --------->ARR11(1)   <---------LBD16              <------ZmHOX2a(2)          <---------ICU4              <---------GLK1(2)  <---------At4g35610           --------->AGP1             --------->ICU4              --------->ARR14(2) --------->At4g35610          --------->At4g35610    --------->At4g35610              <---------ARR14(2) --------->ZAT2               <---------At4g35610    <---------At4g35610   --------->ANAC46     --------->ANAC46                 <---------At4g35610   <---------AHL20(2) ---------ZAT18--------->ARR14(1)<---------ZAT2          --------->At4g35610  --------->AHL20(2)   --   tgtacacataaaaacagattcgatttacacaagtaagctcggaaagttgaatttcacttagctcagatcaatggaagctataaaatcagctcataatgaa  20737200                                                                                             --------                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                      --------->ARR14(2)                                                                                      <---------ARR11(3)                                                                                      --------->ARR11(3)                                                                                      <---------ARR14(2)      --------->GLK1(1)   --------->TOE2(3)           <-----------GT1             <-----------GT1 -->YAB1                 --------->YAB1          <----------DOF2           --------->YAB1    <------- ------->CCA1(2)   --------->ZAT6                <---------DAG2      XXXXXXXXXXXXXXXXXXX>MIR172B*   gataagagaaatcgaaccaaaacactaacataaatcagcaaatggaattgacttttttacaaaaaactccatctccatcaaaattcacgatctggagctt  20737300                                                                               --------->CCA1(2)                                                                             --------->At4g35610                                                                            --------->ANAC58                                                                            --------->ANAC46        <    ----------->GT1               ----------->GT1                           --------->ANAC58        -   --------------->AtSPL3 --------->ANAC46                           --------->ANAC58          ------   <---------------AtSPL8 --------->ANAC58                        --------->ANAC46          ---------   --------------->AtSPL8 --------->ANAC58                     <---------ARR14(2)           --------- ->At4g35610            ----------->RAV1(1)---------->DOF2     --------->ARR14(2)        --------->ANAC46 --At4g35610           --------->ANAC46 --------->YAB1<----------DOF2--------->ANAC58  --------->MYB46(3)   actaaatcgtacaaattcgaactataccacacaaactagtaaacataaaaccctagctttgaacaaatacgaagccataagctacaagaacaaacaacag  20737400          <---------ARR14(2)          --------->ARR14(2)        --------->HSFB2a(1)   ------>MYB46(1)   ------>MYB83 --------->ARR14(2)  --------->MYB52(1) --------->TOE1(2) --------->TOE2(2)                                                                         ------->TEIL ---------MYB52(2)                                                                      --------->ANAC46 -------->MYB46(3)                                                                      --------->ANAC58 ->GAMYB--------->HSFC1(2)                                                              --------->ANAC58 -->RAV1(1)     <---------ARR14(2)                                            ----------->GT1     >>> >MYB52(1)--------->GLK1(2) <---------ANAC55(2)                --------->MYB52(1)      --------------   aaaccaacgaagaatccgaatacagagattaagtgaagaaactctcaccgagttcgattgaagcgtaacagagaatgaaatggagaaaacacgaatcgaa  20737500                                                            <-----------GT1                                                          <---------AHL20(2)                                                 <---------ZAT18                                                 --------->ZAT18                                                --------->ALFIN1          <---------CCA1(2)                                                <---------ANAC58        <---------CCA1(2)                              --------->MYB52(1)<---------ANAC58       <---------MYB52(1)  ---------->DOF2--------->CCA1(2)            <---------ANAC46        <---------DAG2 >>>>>>TBF1      --------->At4g35610          <---------ANAC58   --------->MYB46(3)                 *TSS ---------->ANAC81 ----------->GT1            <---------ANAC58<-----------GT1                <-------   gaagaaaagagagagagagagatgaaaaaaaaaaacagatggataatggtgtgtgcttattttttcaccctcccttatctctctctctatctatctccgg  20737600                                                              --------->ZAT14                                                    --------->ZAT14                                                    <---------ZAT14                                                    <---------ZAT18                  <----------DOF2                   --------->ZAT18                  --------------->AGL15          <------MYB83 --------->ZAT18                 <-----------------AGL1          <------MYB46(1)--------->ZAT18                 ----------------->AGL2          <---------ANAC46--------->ANAC46                 <-----------------AG            <---------ANAC58--------->ANAC58                 <-----------------AGL2          <---------ANAC58--------->ANAC58                 <-----------------AGL3         <---------DEAR3(1)               <-----------GT1                  --------->MYB46(2)    ------------>CBF     <----------DOF2    --------->ANAC46        <---------MYB46(3)   --------->ANAC58               - <---------GLK1(2)<---------------AGL15         --------->MYB52(2)   --------->ANAC58              -- --LBD16   <---------AHL20(2)           --------->ZAT6        <---------ZAT18                  ------   tctgattctttattttttttctttatacggtaagggtctataacacttgttcggtgcaccatcgtgcacgctagcaatacttccaaactctagctaagaa  20737700               --------->ORA47(1)              --------->DEAR3(1)                                          --------->MYB46(3)             --------->DEAR3(2)                                           <---------MYB52(2)     ------->MYC3                                                      --------->MYB46(3)     <-------MYC2                                                    ------>MYB46(1)     ------->MYC2                                                    ------>MYB83     <-------MYC3                                                  ----------->HVH21     <-------PIF5                                                 <---------MYB55(2)     ------->PIF5                                                 --------->MYB46(3)    <---------TGA1a   <---------MYB111(1)         ------->GAMYB   --------->DEAR3(2)    --------->O2  <---------MYB111(1)  --------->ANAC58          --------->MYB52(1)    <---------O2------>MYB83------>MYB46(1)      --------->MYB46(3)------->GAMYB    --------->TGA1a ------>MYB83       --------->ANAC55(2)       ------>MYB46(1)    <---------bZIP60(2)     ------>MYB83        --------->RAP2.6(3)--------->DEAR3(1)     --------->AHL20(2)    =============================MYC_MYB       --------->MYB52(1)-------->P --------->MYB52(1)    --------->ANAC55(2) -------->P     --------->ANAC46          ------>MYB83 <---------MYB52(2)    <---------ANAC55(2)<-----------GT1 --------->ANAC58         --------->MYB52(1)  --------->At5g28300    <---------ANAC46------>MYB46(1)    --------->ANAC55(1)      --------->MYB55(1) ----------->GT1 -------->ARR11(3)<---------MYB59      <---------ANAC55(2)     --------->AtMYB61--------->MYB52(1) ------->RVE1(1)------>MYB46(1)       <---------TOE2(3)        --------->MYB46(3) --------->ZAT6 --->AHL20(2)--------->MYB46(3)      <-----------GT1  <---------DEAR3(2)----------->RAV1(1)   aatatcacgtggtaaaccgacctacttaccaactcaattttacgtaatctaacggccggtttagaccaaccgacccacaaacgaacagtaaattcaatag  20737800             --------->TOE2(3)            --------->ATHB12                                                <---------ATHB12            <---------ICU4              <---------AHL20(2)           --------->WOX13(1)            --------->YAB1              --------->AHL20(2)         <---------YAB1           <---------ATHB12    >>>>>>>>>ARR2<---------AHL20(2) --------->ANAC55(2)           --------->ICU4    <---------YAB1<---------------AGL15  ------->TEIL <---------ANAC55(2)  --------->YAB1 <-----------GT1<---------WOX13(1)             <---------ANAC55(2)   tttatcagaaaaaatcattaaacttctccatttgattgttttttaatttaagtagcaaatacaatatgtatcattcaaatcacttaaaattttaaacttg  20737900                                                                                       --------->AtMYB61                                                                                       --------->DEAR3(1)                                                                         ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2)                                                                       --------->ARR14(3)                                                                       <-----------ARR10                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)    --------                                                                       <---------ARR11(3)   <--------                                                                       --------->GLK1(2)   <---------SPL7                                                          <---------ARR11(3)          --------->MYB46(3)            <---------DEAR3(2)                         >>>>>>>>>TBF1   --------->ARR11(3)  --------->ORA47(1)          ---------->ID1  <-----------GT1       ---------->DOF2        <---------ARR14(3) --------->DEAR3(1)        <-----------RAV1(1)                 ----------->RAV1(1)       <------ZmHOX2a(1)<---------ALFIN1      <----------DOF2   --------->AHL20(2) <----------ID1 --------->ARR11(3)      --------->AtMYB61   ggttctctctttgtcggtttagagaattaaaccaattttgtaatagccacaaaagaagaagaactacggtaaggatcttgacaacctcaccaccgtccgt  20738000                       ----------->HVH21                      ------->MYC2                      <-------MYC3                      <-------MYC2                      ------->MYC3                     --------->O2                     <---------O2                     --------->ANAC55(2)                     --------->TGA1a                     --------->ANAC46                     <---------ANAC55(2)  --------->MYB46(2)                     --------->ANAC58 <------MYB46(1)                     --------->bZIP60(2)  --------->MYB59                     <---------TGA1a  <------MYB83                     ==================================MYC_MYB                     --------->ANAC55(1)<---------MYB52(1)                <-----------GT1                     --------->ANAC58 <---------MYB46(3)               --------->ARR14(2)                ----------->HVH21   <---------WOX13(1)                 <---------ARR11(3)         ---              ------>ZmHOX2a(2)   --------->ATHB12                     --------->ARR11(3)         <--             <------ZmHOX2a(2)    <---------ICU4                       <---------ARR14(2)         --- ->SPL7     --------->ARR11(3)   --------->ICU4<-------GAMYB    ----------->RAV1(2)              <--- -MYB52(1)  <---------ARR11(3)   <---------YAB1--------->At5g28300    <------ZmHOX2a(1)  ---------->ID1   tttagaggctctaagatcgtgacacgtgacatttcatgattggttaggcagttaatgactattctaccctgaggattttcttctctcgctagtcgctatg  20738100  Previous    Next  AGI:  At5g50920.1    Description:  CLPC (HEAT SHOCK PROTEIN 93-V); ATP binding / ATPase. similar to ATCLPC (CASEINOLYTIC PROTEASE C), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT3G48870.1); similar to APG6/CLPB-P/CLPB3 (ALBINO AND PALE GREEN 6), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G15450.1); similar to ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G51070.1); similar to ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor (GB:P46523); similar to ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor (GB:P35100); similar to ATP-dependent Clp proteas Range:  from: 20732695    to: 20737600    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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