Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->ALFIN1                                                                --------->DAG2                                                               ---------->DOF2                                                          ------>ZmHOX2a(1)                                                      <---------ARR14(2)                       <-----                                                      --------->ARR14(2)                       ------   --------->At4g35610               <---------MYB52(1)  --------->TOE2(3)                  ---------  --------->ALFIN1                  <-------GAMYB    --------->GLK1(1)                     ---------- ------->DAG2                 <---------HSFB2a(1)    <---------GLK1(1)            <---------YAB1 ------->DOF2     ----------->ARR10<---------MYB46(3)<---------CCA1(2)<---------PCF2---------->DOF2<-   aaaagtgctgaaacatagggtagagactgaaaaccttcggttgatttcttcttgcatatccttacaaaagtgggcctagataatatcaaagaaacgttta  20684100                                                              --------->ZAT6                                                            <<<<<<<<<<<<<<<<<LFY                   <-  --------->ZAT6                                          <---------ANAC58                         <- ----AHL20(2)              ---------->DOF2                <---------ANAC58                         <- --->AHL20(2)           --------->AHL20(2)        --------->ALFIN1                                 -- >TOE2(3)        <----------ID1                 <---------ANAC58               --------->ANAC46  <--- ->GT1       <---------AHL20(2)                 <---------ANAC46     ------>NtERF2       --------->CCA1(2) --------ICU4--------->AHL20(2)                 <---------ANAC58    <---------PCF2     --------->YAB1   attatctctaaacaattaatcgacaaataaaaaggagagactttgtaagggcgtgttgatgcttacactggggccaagaacacgacgaatgatatgatgt  20684200                                                      <--------P                                                    --------->ALFIN1          <---------At5g28300           --------->ANAC58<------MYB83         <-----------GT1    <---------YAB1      ---------->DOF2 --------->AtLEC2        --------->ICU4 --------->ANAC58<------MYB46(1)                           <-- --------ANAC46        <---------ICU4   ----------->GT1<---------AtMYB61                          <-- --------ANAC58        --------->YAB1   --------->ANAC46<---------MYB46(3)                --------->YAB1 --------ANAC58--------->ZAT14          <---------ANAC55(2)     <---------ZAT14        <----------DOF2 ------->At4g35610    --------->ICU4    --------->ANAC55(1)     --------->ZAT18  <---------MYB46(3) --------GT1   <---------ZAT14          --------->ANAC55(2)  <---------ZAT6  <---------YAB1 <--------   tacctgcaaatttacagcgtagtaaacattatgagtcttaaaacgtaattcaaagtgttggtagagtttactagtatatatgatggtttcttttataaat  20684300                --------->ANAC58             <---------SPL7            --------->ANAC58            --------->ANAC58            --------->ANAC46            --------->ANAC55(2)                    --------->MYB111(1)           ------->TEIL                            --------->MYB52(2)         <---------ZAT18                           --------->MYB46(2)         --------->ATHB12     ------->TEIL      --------->GLK1(2)        ------------>MYB.PH3(2)    <---------ANAC58 -------ANAC58  --------->ANAC58           --------->AHL20(2)    <---------ANAC58 -------ANAC58 ------->TEIL       ---------->DOF2<---------MYB52(1)        <---------ANAC58    <----- -YAB1   --------->ZAT18xxxxxxxxxxxxxxxx>smallRNA(i)             <---------ANAC58              <-----   gcttatgtatgtgcacgtacccaagattccaaacacaaatgcccataaattgttagttagagccatttcttgatgtttcttgattagttttctctccctt  20684400                                    --------->DAG2     --------->ETT(1)              ---------->DOF2  <------MYB83                 >>>>>>>>>>E2Fa  <------MYB46(1)              >>>>>>>>>>E2Fc --------->MYB59               >>>>>>>>>>E2Fd <---------MYB46(3)            >>>>>>>>>>E2Fe <---------AtMYB61            ----------->GT1 -----DOF2               <---------YAB1    ---------->DOF2 ----MYB52(1)----------->GT1--------->At4g35610                            --------->ARR11(3)   tgtttggtcggactatcgaaaaaacttatgagcgggaaaaagtatcaaaggccaagagaaattaagagagagatagagctcttgaagcctcttctaactc  20684500                                                       <-----------TBP                                                     --------->CCA1(2)                  --------->YAB1                                 ------------>CBF   --------->ARR11(3)                  --------->TOE2(3)                                <-----------GT1     <---------ARR11(3)                 ----------->GT1                              *TSS     ----------------->AGL1               ---------->DOF2   --------->ARR11(3)        ------->TEIL---------->DOF2           <-------TEIL    ------------>CBF   ttgaagctctagtttgtgagttttagctatgaatttacaatgccaaagatggaagatatatatagagggttcacatgtgaaagtatgcaatgttaatacg  20684600                             --------->ATHB51                             --------->ATHB12                   <---------ANAC58                   <---------ANAC58                   <---------TGA1a                   <---------bZIP60(2)                   --------->TGA1a                   <---------ANAC46                   <---------TOE2(3)                   <---------O2                    <---------WOX13(1)         --------->CCA1(2)                   <---------ANAC55(2)          <---------YAB1              --------->AHL20(2)                 <------ZmHOX2a(1)              ===============================MADS_MADS           <---------HSFB2a(2)            <---------CCA1(1)      --------->AHL20(2)           --------->HSFB2a(2)<------------CBF  <---------------AGL15 ----------->GT1      <---------    --------->ANAC58        <---------YAB1<---------RVE1(1)      <---------AHL20(2)------->TEIL    --    --------->ANAC46  <-----------HVH21  --------->ARR11(3)    <---------------AGL15  <----------DOF2    --------->ANAC58 --------->ALFIN1    <---------ARR11(3)   <----------DOF2--------->AHL20(1)    <-   tttaagacgacatcgagaaggacgtgtcacattattggtctcagatatttctaattgatgtattcttttaaatggaaaatatatgaaacttttatgtggt  20684700                    <---------MYB52(1)                   --------->TOE2(3)                  <---------ANAC58                  <---------ANAC58                  --------->ANAC55(2)                  <---------ANAC46                  <---------ANAC55(2)             <---------MYB46(3)         <---------ANAC58                                     <---------YAB1         <---------ANAC46                                  --------->AHL20(2)         <---------RAP2.6(2)                               <---------AHL20(2)                  ------         <---------ANAC58                               <---------AHL20(1)                     <----- --RAV1(1) <------NtERF2                                --------->AHL20(1)                     <----- ------->ZAT18 <---------MYB52(1)                    <---------AHL20(2)              <----------DOF2 --------ZAT18<-------GAMYB     <----------DOF2      --------->AHL20(2) --------->YAB1       --------   atgcactcttggcgtctgttacgttagtatcaaactttttatgccaaacctagatttatatattaatatcgtattcatactaatgagctttaacaaagat  20684800                                 <---------ETT(2)                                 <---------MYB46(3)                                 --------->ETT(2)                             --------->AHL20(2)  <--                       ---------->DOF2 <---------TOE2(3)                     <---------YAB1       <-- --->ARR11(3)         <---------AHL20(2)             --------->ANAC58    --------->ANAC55(2)      --- ----ARR11(3)         --------->AHL20(2)             --------->ANAC58    <---------ANAC55(2)      --- ----GLK1(2)  ----------->GT1<---------HSFB2a(1)   ---------->DOF2   <-----------HVH21         ------ --->ARR10  ---------->DOF2--------->MYB52(1) <----------DOF2      --------->ALFIN1  <---------ZAT6   tttctgtaaaaccgaaaagaaaatttaaagaacggtcgatagaggtttctttagaaagccattgaacgagtggtcacttattatttagaggtaaccaaga  20684900                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(2)                                                                                       <----------DOF2               --------->At4g35610                                                 --------->ANAC46               <---------At4g35610                                               <-----------GT1       ------>ZmHOX2a(2)                       <---------YAB1               <---------ICU4   ------>ZmHOX2a(1)       ========================================================================== ----------->RAV1(2)       --------------->AGL15                           <------ZmHOX2a(2)    <---- -------HSFB2a(1)    --------------->AtSPL8  <---------ICU4               <---------ARR11(3)   <----- -------HSFC1(2)     <---------HSFB2a(2)    <------ZmHOX2a(2)             --------->ARR11(3) <------- ------>HSFC1(2)     --------->HSFB2a(2)   --------->ARR11(3)    --------->AHL20(2)--------->ANAC58 ------>HSFB2a(1)<----------DOF2           <---------ARR11(3)    <---------AHL20(2)--------->ANAC58 ---->DOF2  <---------MYB52(1)   --------->ANAC55(2)           --------->YAB1 <---------YAB1---------   agctcctgatcgctgttagctttctagtaccatttaagtaatatagatcattatacttttgacaaaaataaatatagatcattatacgcctttaattagt  20685000  Previous    Next  AGI:  At5g50800.1    Description:  nodulin MtN3 family protein. similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT4G25010.1); similar to N3 protein [Glycine max] (GB:ABT17358.1); contains InterPro domain MtN3 and saliva related transmembrane protein (InterPro:IPR004316) Range:  from: 20682303    to: 20684530    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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