Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <---------REM1(2)                                                                                   --------->At4g35610                                                                                  --------->RAP2.3(2)                                                      <-----------RAV1(2)         >>>>>>>>>AtERF-4                                                     <---------ZAT14              --------->RAP2.6(2)         --------->ANAC58                           <-----------HVH21   ---------->CDC5         --------->ANAC58                --------->MYB52(1)          <---------At4g35610            < ------->GT1                 --------->HSFC1(2) --------->ANAC58     --------->At4g35610            < ---ANAC46                   <---------HSFC1(2) --------->ANAC58  ---------->DOF2--------->RAP2.3(1)-   ggataaaacgctcgcagtcttggagtttggaaacatcggctactaagggcaagacttcaggggagccatagagctcagcgagagccgctacatggaagag  20665600                                                                                       <----------DOF2                                            --------->ANAC55(2)                      ------>MYB83                                           --------------->AtSPL3                 --------->ANAC58                                           --------->HSFB2a(2)                    --------->ANAC58                              --------->ANAC58                     <---------REM1(2) ------>MYB46(1)                              --------->ANAC58            ---------->DOF2     --------->YAB1      ---                              --------->ANAC46        --------->ANAC58      <-----------HVH21     ---      ------>ZmHOX2a(1)     <-----------GT1<---------HSFB2a(2)   --------->ARR14(2) <---------ALFIN1 ---------ARR14(2)         <---------ARR14(2)         --------->ANAC46  --------->ANAC46    --------- -----------ARR10          --------->ARR14(2)<---------SPL7      <---------ARR14(2)--------->MYB46(3) -------->ARR14(2)    ----------->GT1<---------ALFIN1 --------->ANAC58--------->ANAC46 <---------DAG2   aggttctcctcttatgtcaacaagtgctaaatacgctcccctcttcccgtactcatacgctaaagcctatacacacactatcacacccacttttacataa  20665700                                                       --------->At4g35610           <------NtERF2                                                       --------->ZAT2               ----------->RAV1(1)                                                    --------->At4g35610             ------>NtERF2                                                    <---------HSFC1(2)             --------->DEAR3(1)         <---------YAB1                             --------->HSFC1(2)             ----------->HVH21       <---------ICU4                               <---------At4g35610            <---------ETT(2)      <---------YAB1                               --------->GLK1(2)              --------->RAP2.3(1)    --------->YAB1                        --------->At4g35610                    ------>NtERF2    <---------ICU4                        <---------At4g35610                    --------->LBD16   --------->ICU4                         <---------ATERF1(1)                   <---------LBD16   <---------ATHB12               -------->P      <---------GLK1(2)            <---------LBD16 ------>TOE2(3)           <-------GAMYB  --------->DEAR3(1) --------->LBD16<----------DOF2    ------- ------>TOE1(3)          <---------MYB46(3)    <---------HSFB2a(2)     --------->MYB46(3)     <------ >ANAC55(2)              --------->MYB52(2)  ------>NtERF2<---------LBD16  <---------DAG2     -------   ccctaatcatcatttttgtttgtttgtttgttgacttacctcgccgatgccagaagctgctccggtgatgacaacaacttttccggcgacattttccgag  20665800                   <---------RAP2.3(3)           <---------At4g35610           --------->At4g35610       --------->LBD16       ------>NtERF2      <---------LBD16      <---------RAP2.6(2)<-----------ARR10      <---------HSFB2a(2)--------->ARR14(2)     <---------LBD16     <---------ARR14(2)     --------->RAP2.6(3)<------NtERF2   <---------ARR14(2) <---------ANAC46        <------MYB83   --------->ARR14(2)<------NtERF2            <------MYB46(1)   --------->GLK1(2) <---------LBD16          <---------ANAC46  <---------GLK1(2)<---------RAP2.3(2)       --------->MYB59  <---------ARR14(2)<---------RAP2.3(1)      <---------MYB46(3)  --------->ARR14(2)<---------ORA47(2)       <-----------------------TaNAC69(2)   <------ZmHOX2a(1) -->HSFB2a(2)      <---------DEAR3(1)    --------->MYB52(2)                       =================== ---HSFB2a(2)     --------->ATERF1(1)  <--------P   <----------ID1     ----------->GT1             -- -->LBD16<-----------RAV1(2)          <---------MYB52(1)       <-------TEIL      ----------->GT1   <-   aacagattccggcagatggagacggcggatttgagcctctggtaagttgggtagaagacaagaagtgcatacaaggttaagagaggaaacaagaagttga  20665900         <---------WOX13(1)       --------->ATHB12      <---------YAB1 =================================HOX2a_HOX2a ------>ZmHOX2a(2)                   <<<<<<<<<<<<<<<<<LFY --------------------->WRI1 =======HOX2a_HOX2a            <---------ZAT14            <---------ANAC58                          < ------->ARR11(3)          <------ZmHOX2a(1)    <-----------GT1         <----------DOF2      <------- --------ARR11(3) --------->AtLEC2--------->ANAC46 *TSS   <---------ANAC58                   <-------   tgatcttgttgattgaatccatgcatcaaggactatacttcacaatggtttttcagttttccttgttctctccgctttcggagttttttgttttgcttta  20666000                                                          ------->MYC3                                                          ------->MYC4                                                          <-------MYC2                                                          <-------MYC4                                                          ------->MYC2                                                          <-------MYC3                                                         --------->TGA1a                                                         --------->O2                                                         <---------ANAC55(2)                                                         --------->ANAC55(2)                 --------->YAB1                          <---------TGA1a                <---------YAB1                 <----------TaMYB80              --------->YAB1           ---------->DOF2   <---------O2        <---------HSFC1(2)             ============================bZIP_DOF                 <--------        <---------HSFB2a(1)         --------->TOE1(2)  <------------OsbHLH66         --------->YAB1        --------->HSFB2a(1)     <---------GLK1(1)    <---------ALFIN1                --------->AHL20(2) -----------RAV1(1)      ------->TEIL------>ZmHOX2a(1) <---------ALFIN1              <---------AHL20(2) --DAG2 --------->HSFC1(2)<-----------RAV1(1) --------->ARR14(2)               --------->TOE2(3) ---DOF2<---------At4g35610   ------------>CBF<---------ARR14(2)               --------->TOE1(3)   ttctggtggaagcttctcatgataatgtatgtggcaatcctacaagctgatatgcccacacgtgtttgcacaatctacaaacctcaattatatagtgttt  20666100                                                       <---------CCA1(2)                                          <----------DOF2  <----------DOF2                       <-------TEIL  <-----------GT1 --------->ANAC46    --------->YAB1 -ZAT6        <---------AHL20(2)<---------ZAT6   <-----------GT1        <---------ATHB12      <------   ttgttatggacgatatatacttgggttcaccatagtattaaacccttttattcacccgtctctttttctatctaatcaaaataaaccaatatgctatgtc  20666200                                                                   --------->ICU4                                                                --------->AHL20(2)                                                                <---------AHL20(1)                                                                <---------AHL20(2)               <---                                                                --------->AHL20(1)         <---------AHL20(2)                                 --------->WOX13(1)            <---------AHL20(2)  --------->ANAC55(2)                                <---------AHL20(2)             --------->AHL20(2)  <---------ANAC55(2)                      ----------->GT1                   ----------->GT1      <---------AHL20(2) -----                  <---------AHL20(2)--------->YAB1      --------->ANAC58     --------->AHL20(2)------       <---------ARR14(2)       --------->AHL20(2)      --------->ANAC58     --------->AHL20(1)<-----       --------->ARR14(2)      --------->AHL20(2)      --------->DAG2  --------->YAB1      --------->AHL20(2) -----HVH21 --------->YAB1   --------->YAB1           ---------->DOF2 <---------YAB1  ------->TEIL   atatagtcatatactcatattatatgtttaaaaataaatcaaaactaaaaaaaaaaaaaagcaaaataaattatgaaaataaaatatgtatttttaatta  20666300                                                                           <---------YAB1                                                                    --------->AHL20(2)                                                                 <---------YAB1                                                                <---------AHL20(2)                                                                <---------AHL20(1)                                                               --------->YAB1                                                               <---------AHL20(2)                                                               --------->AHL20(2)                                                           <---------AHL20(2)                      <-         <---------ICU4                                    --------->AHL20(2)                      --      <---------AHL20(2)                               <--------HAHB4    --------->YAB1       <------     <---------AHL20(2)                                --------->ATHB12  --------->AHL20(2)   -------     --------->AHL20(2)  <---------YAB1                <---------ICU4--------->AHL20(2)       ------- ------TOE2(3)     <---------YAB1                      --------->YAB1<---------AHL20(2)       <------ ----->DOF2 <-----------GT1                           <---------ATHB12  <---------YAB1     --------->YAB1 --->AHL20(2)  <---------DAG2          <---------TOE2(3)  --------->AHL20(2)            --------->TOE2(3) ----AHL20(2)  <----------DOF2--------->YAB1     <-----------GT1--------->AHL20(1)   --------->YAB1--   aagaaaattaaatattactttatgtttataaataagaatttaagttagtatttacaatcatttaattatatttaattataaatctaatcacattaataaa  20666400                                                                                                    <                                                                                                    - --------AHL20(2)                                                                                   < ------->AHL20(1)                                                                                   - ---AHL20(2)                   <---------TOE2(3)                                               ------ -->AHL20(1)               --------->YAB1                                                      <----- -->AHL20(2)<---------------AGL15                      --------->YAB1                          <----- ---AHL20(1)--------------->AGL15             --------->YAB1 <---------AHL20(2)      <---------At4g35610 ------->AHL20(2)  ----------->GT1     <----------ID1 <-------TEIL                   --------->At4g35610   ataaaatgaaattccttcaaatagtacaattttaagtttttaagacaaaaatagcattcatatttttttttgacataaataacattcagataactatttt  20666500  Previous    Next  AGI:  At5g50770.1    Description:  ATHSD6 (HYDROXYSTEROID DEHYDROGENASE 6); oxidoreductase. similar to ATHSD1 (HYDROXYSTEROID DEHYDROGENASE 1), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G50600.1); similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G50700.1); similar to steroleosin-A [Arachis hypogaea] (GB:ABS28874.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 20663906    to: 20665951    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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