Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   ------>ZmHOX2a(2)                                                <---------GLK1(1)                                                <---------At4g35610                                                --------->At4g35610                                               ------->TEIL                                               <---------AGP1                                               --------->ARR11(3)                                               --------->ARR14(2)                                   <---------ALFIN1                                 ----------->RAV1(1)   ----------->HVH21       <---------ICU4      <---------ARR14(2)           <-----------GT1        <- --------->O2             <---------ATHB12     <---------ARR11(3)         <---------DAG2       <----- --------ALFIN1       --------->ZAT14 <----------DOF2                     <----------DOF2  --------->YAB1 --->At4g35610     =====================================HOX2a_HOX2a --------->AtMYB61     <---------ATHB12 >CCA1(2)          ------>ZmHOX2a(1) <-----------------AGL3   <----------DOF2     <---------ZAT6  <--   tccacttgacgatggctcttcctctgcaatctttgcaacacttttaatggatctgccttctctcctttcaccacaactttactagtcttacaatcagtag  20654800       <---------ALFIN1     ------>ZmHOX2a(1)      --------->YAB1                                   ----------->GT1    --------->ANAC46        <---------ICU4                                ----------->GT1 ------TEIL                <---------ATHB12                           --------->ZAT14            ---- ----MYB46(3)   --------->YAB1             <----------DOF2        --------->ZAT6--------->AHL20(2) ---------GT1------>ZmHOX2a(1)  ----------------->AGL2 ---------->DOF2<---------ZAT14           <----   ttacatcctccactcctatcacattttcaataatcccaaaactagctttaaaatttctaaagtactaaacactagagtgtgataaaatacactagagtat  20654900                                                                                --------->YAB1    <--                                                                          --------->TOE2(3)     <----                       <----------DOF2                 --------->TOE1(3)--------->ARR11(3)     ------       --------------->AtSPL8                          --------->TOE2(3)<---------ARR11(3)     <----- ----->YAB1      ---------->DOF2                    <---------ALFIN1    --------->GLK1(2)   <-------- -----YAB1   --------->TOE1(3)            <---------AHL20(2)           --------->RVE1(1)    <--------   gataaactggtagtaccttcaaagcctttaagacatctatggatttttttagcacaaccttcacaatgcataaaaatcttaagcacaatctcttgaggtt  20655000                                                                                          -----------   <------------------------ANAC81                                                 ------>ZmHOX2a(1)  <----------DOF2                                                                  --------->LBD16 --------DOF2                                                                      --------------->AGL15 ---TEIL                                                                           <---------------AGL15 --->GLK1(2)                   <---------YAB1                                     <-----------------AGL2 ----ARR14(2)           <---------CCA1(2)                        ------>ZmHOX2a(1)<-----------------AGL1 -TOE2(3)             <---------ANAC58 <---------ANAC58--------->GLK1(1)          <-----------------AGL3 -TOE1(3)             <---------ANAC58 <---------ANAC58<---------GLK1(1)   <---------CCA1(2)    -----   ctttctttttctcttcttctggtttcttatcttctgatttcgcttgtggctcttcagatttcttctcctccattttcttatcttcctgaaaatggcaaaa  20655100         <---------AHL20(2)         --------->AHL20(1)         --------->AHL20(2)         <---------ARR11(3)         --------->ARR11(3)  <------ZmHOX2a(1) ----------->GT1   ----------->GT1 >GT1    <---------AHL20(1)           <---------ZAT6                          --------->ANAC46 ---->YAB1<---------AHL20(2)     --------->YAB1 ----------->GT1   ----------->GT1   ataaggagaaatatatttgagaggtcaatagacaagaatagtgtttggctgtgtaaatttgaataagtttgaaaaaacacactaaacctctcccattgaa  20655200                                                                                            <------ZmHOX2a(2)                                                                                           --------->ARR11(3)                                                                                           <---------ARR14(2)                                                                                           <---------ARR11(3)                                                                                           --------->AGP1                                                                                      <----------DOF2                                                                                  ---------->ID1                                                                            --------->ARR11(3)    <--         --------->ZAT14                                                    <---------GLK1(2)------>ZmHOX2a(2)         <---------ZAT14                           <----------DOF2      <---------MYB52(1) --------->ARR14(2)        <---------ZAT6                        ---------->DOF2       ------->TEIL<-----------RAV1(1)   <-----------HVH21                   ----------->GT1  <-----------GT1<-----------HVH21   <---------AGP1  <---------ZAT6      *TSS<----------DOF2   <---------YAB1 <----------DOF2  <---------ARR14(2)    ---   tttagtgtcagtgttgagacttgagaggctttttagtggcacagttattaaagctttttttctttctatggaccgtcagattttggtgctttagatctgt  20655300                                                                                             --------                                                                                        <---------YAB1                                                      <----------DOF2                <---------AHL20(2)            --------->ANAC46                        --------->ZAT18              <---------AHL20(2)           <-------TEIL          <-----------GT1    <---------ZAT18        <-----------GT1--------->YAB1 ---------TBP                 <----------DOF2     <---------ZAT18          <---------AHL20(2)<------- ------>AHL20(2)       <----------DOF2     ----------->HVH21       <---------ARR11(3)<---------YAB1   ttatatacacatatacatcacatttctttattcttttaccctagagtgacagagcgcatttactaccaatttcttatttacattttttttattaataaaa  20655400                  --------->ARR11(3)         <--------ATHB1                                                                  <---------At4g35610         <---------ICU4                                                               --------->At4g35610         --------->ATHB51                 --------->AHL20(2)                          <---------At4g35610        <---------ATHB12                <----------DOF2                            --------->At4g35610        --------->ICU4           <---------YAB1                                 <---------ANAC58        <---------ATHB51      ---------->ID1                                    <---------ANAC58 ->AHL20(2)       <---------GLK1(2)    <---------ANAC58                 <----------DOF2 ----------->RAV1(1) --AHL20(2)       <---------ARR11(3)   <---------ANAC58   <---------MYB46(3)   --------->ATHB12    <-   cttcaaaccaataattcatagattttgtttttgttgtcattgctttaaatgtttttttgtttgttaatgctagactttgaatgcttgctgcagcacataa  20655500                                                 --------->At4g35610                                                 --------->ZAT2                                      --------->TOE2(3)                                         <----                        <----------DOF2     <---------AHL20(2)                            <---------HSFC1(1)   --------->MYB52(1)--------->ARR11(3)     --------->YAB1             --------->ANAC58   <---------HSFB2a(2) --------------AGL15 <---------ARR11(3)<---------MYB52(1)              --------->ANAC58   --------->HSFB2a(2)   actactaatggtgagttttagactatcttttggtaaactacgttatttataagctggaatttgaaacacagataagaaacagttcaaaatttctagacgt  20655600                                                                                     --------->ZAT18                                                                                     <-------TEIL                                                                                     <---------ZAT14                                                                                     <---------ZAT18                                                                                 --------------->AtSPL8                                                                          ------>ZmHOX2a(2)                                                                         --------->CCA1(2)                                                                         <------ZmHOX2a(2)                                                 <----------ID1         --------->AGP1                                                 <------ZmHOX2a(1)      <---------ARR11(3)                              --------->ANAC58   ================================HOX2a_HOX2a                     --------->YAB1    <---------ANAC46                 --------->ARR11(3)                    <---------YAB1 <---------ARR14(2)                  --------->GLK1(1)        -----                  --------->YAB1   --------->ARR11(3)            --------->MYB52(1)  --------->ZAT14              --------->ARR11(3)   <---------ARR11(3)     <---------ANAC55(2)   ---------->DOF2 -----          ---------->DOF2     --------->ANAC58   ===============================HOX2a_HOX2a  <------- -----MYB52(1)<---------ARR11(3)  <---------CCA1(2)       --------->ANAC55(2)  <---------WRKY45------   tgtgtcattttcgaaagctcttataatagaccacgaatatctcgtgagagaggaacaaatacttgactaactgagatctagtcaaagtacactatttacc  20655700  Previous    Next  AGI:  At5g50740.1    Description:  metal ion binding. similar to ATFP3 (Arabidopsis thaliana farnesylated protein 3), metal ion binding [Arabidopsis thaliana] (TAIR:AT5G63530.1); similar to ATFP3 (Arabidopsis thaliana farnesylated protein 3) [Arabidopsis thaliana] (TAIR:AT5G63530.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO68320.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) Range:  from: 20653092    to: 20655222    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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