Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                   --                                                                                               <-----                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                     --------->ANAC58                                       ---------                                     --------->ANAC58                                       <--------                                     --------->ANAC46                                      <---------CCA1(2)                                 --------->ANAC46                                          --------->GLK1(1)                                 --------->ANAC58                                          <---------GLK1(1)                         --------->GLK1(2)                                             --------->ANAC58             ---------->DOF2     --------->ANAC58        <----------DOF2               --------->ANAC58            <------ZmHOX2a(1)  <---------ATHB12     <---------At4g35610             --------->At1g77200          <---------TOE2(3)    ---------->DOF2  <-----------HVH21                   ----------->HVH21      <---------ZAT6     --------->ARR14(2)  <---------ANAC58                       --------->DEAR3(1) ---------YAB1           <---------ARR14(2)  <---------ANAC58                      --------->DEAR3(2)   ttctgatagagtaaggaaagaatagagaatccaataagcaagccattgctcgtcatctacttttgatgggctctctattgctatcaccgacgcatatctt  20651400      --------->YAB1    ------------------------>ANAC81    <---------ARR11(3) ---------MYB59 --------------->AG -----DOF2 -ARR11(3)                                                                                         -- ---ARR10                                                                                       ----- >ARR11(3)                                                                                     <----- -ARR11(1)                                                                                    <------ >ARR14(2)                                                                             --------->At4g35610 -ARR14(2)              <------ZmHOX2a(2)                                      <---------ARR14(2)  <-   taccaaaatcataaaaacaaaattagatcaaaataaaactaaacaaaaatgtagagaaacaatagtagattacttacaacggatagagcagcatcaccac  20651500               --------->SPL7             <---------SPL7                                               <---------ARR14(2)            ------>ZmHOX2a(2)                                             --------->ARR11(3)           --------------->AtSPL3                                         --------->ARR14(2)    <---------ANAC46                                               <---------ARR14(2)    <---------ANAC58                                               --------->GLK1(2)              ---    <---------ANAC58                                           --------->YAB1                    <--- <---------DEAR3(1)                                    --------->YAB1     <---------ARR11(3)     <<<< ------->ARR14(2)   ---------->DOF2               <---------YAB1   --------->ARR14(2)          ------ ---->O2<---------YAB1                    ----------->GT1     ----------->GT1     --------->TOE2(3) ----LBD16 --------------->AtSPL8       <---------ICU4 <---------ICU4    <------ZmHOX2a(1)  <-------- ---ALFIN1 <---------------AtSPL8    --------->YAB1   <---------ATHB12 --------->LBD16 --------->YAB1 --------ARR14(2)--------->TOE2(3) <---------ARR11(3) --------->ICU4  <---------LBD16 <---------YAB1   gggtctgcgtatgatcgtaccataaaacaaaacacaaaatcataatgttattttcaatgatgaaatgaaaatccaggatattaatcttatcatataacaa  20651600      --------->AHL20(2)   --------->TOE2(3)   --------->TOE1(3)   <---------------AGL15   --------------->AGL15                        <---------AHL20(2)  ----------------->AGL3                    --------->ICU4 ------>YAB1                              --------->AHL20(2) ------ATHB12                             --------->YAB1 <<<<<ARR2            --------->TOE2(3) --------->AHL20(2) --->WOX13(1)   --------->AHL20(2) ----------->GT1    --------->AHL20(2)     --------->ANAC46 ---GT1   ----------->GT1        ----------->GT1--------->AHL20(2)---------->DOF2               -----   tcaaaccataaattgaaaataaaaacttaaatggatagagaaaataatatttaaaatcaaatagaagaaaaagaaatatacccagcgagggaatgaagag  20651700                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                   --                                                               <------ZmHOX2a(1)                   <-                                                           ---------->DOF2                         --                                                         <---------ATHB12                          <-                                    --------->ANAC58    ------>MYB46(1)                            --                                 <------ZmHOX2a(1)      ------>MYB83          *TSS                ---          <-------TEIL  --------->ICU4 ----------->RAV1(1)--------->YAB1      --------->HSFB2a(2) <-- ---->At4g35610      ---------->ID1 --------->ANAC58   --------->WOX13(1)     <---------HSFB2a(2)----   cagagagagaagtccatagttttgtcattttgagaggaacacaacaaaatccaaaaccaatcaaaggacgctcttgttttctgaaacaacacgattagag  20651800          --------->AHL20(2)          <---------AHL20(2)        <-----------TBP ------>ZmHOX2a(2) ------ZmHOX2a(2) --------ARR14(2)                                                                                   - ------->ARR14(2)                                                                                   - ------->ARR14(3)                                                                                   - --------ARR14(3)                                                                                 --- ------->ARR11(3)                                                                                 <-- --------ARR11(3)                            <---------AtLEC2                          <---------AHL20(2) ------->AGP1                           --------->ARR14(2)                            --------->AHL20(2) ------>GLK1(1)                         <---------ARR14(2)>>>>>>>ZML2                 <---------AHL20(2) -------GLK1(1)   --------->ZAT6   <-----------GT1   <------MYB83             ----------->GT1  ------ ------->ARR10  <-----------GT1<----------DOF2       <------MYB46(1)   <------ZmHOX2a(1)   <---------   agatcttcttatttatattaactctcttggacactttaaacggttttgcacgatttggttctagttcgaaccaggacgaatggttttataaatttacaaa  20651900                                                                             <---------ANAC58                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                                                <---------YAB1    ------->GAMYB <---------TOE1(2) ----->MYB83                                 <---------YAB1      --------->MYB46(3) -------->MYB52(1)                         <--------HAHB4       <---------TOE2(3)       <---------ZAT6 ----->MYB46(1)                            <---------ICU4       <---------TOE1(3)<---------MYB46(3) ------>AtMYB61                            --------->YAB1      <-----------GT1 <---------MYB52(1)  -- -------MYB59                             <---------ATHB12  <----------DOF2  <---------ANAC58      <- --->ANAC46                               <---------YAB1  ----------->GT1   ---------->ID1         -- --GT1                                    --------->ICU4<---------LBD16 <---------MYB52(1)         <-   ccaaaccgatgaaattagttgttctcttcttgagtaatcaactaatcattatacttagtccggtttaacgatcggtttgtcgtttgtttagtgtccatga  20652000                <----------DOF2              <---------At4g35610              <-------GAMYB             ------>NtERF2             <---------DEAR3(2)            <---------DEAR3(1)           --------->RAP2.6(3)          <-----------HVH21         <---------O2         --------->ANAC58         --------->ANAC58         --------->TGA1a         --------->ANAC46         <---------TGA1a         --------->O2                                                --------->ORA47(1)         ==================bZIP_DOF                                 --------->MYB46(3)         ==================bZIP_DOF                                 --------->DEAR3(1)         =============MYC_MYB                                      --------->At4g35610   <---------At1g77200         --------->bZIP60(2)                                       --------->DEAR3(2)    <---------DREB2C(2)       <---------ALFIN1                                          <-----------GT1         <---------DEAR3(1)      --------->ARR14(2)                                        ----------->HVH21        <---------DEAR4(1)      <---------ARR14(2)                                       <-----------HVH21    --------->At4g35610     <-----------HVH21                                <---------ARR14(2)            <---------At4g35610    --------->ANAC46                                  --------->ARR14(2)          ================RAV    ----------->HVH21                                <---------ARR14(1)        --------->ANAC58    --------->LBD16                                  <---------CCA1(2)         --------->ANAC58  ----  <---------LBD16                                  <---------ANAC58<---------At4g35610  --------->DDF1 --------->MYB52(1)                    --------->GLK1(2)      --------->bZIP60(2) <-----------RAV1(2) ------->ARR14(2)         ---------->DOF2          <---------ANAC58--------->ATERF1(1)<-----------RAV1(1) --------ARR14(2)     <----------ID1  --------->ARR14(2) --------->ANAC46    ---------->DOF2    <---- ------->ZAT14--------->At4g35610     <---------GLK1(2)  <---------ETT(1)   --------->YAB1<---------DEAR3(2) --------ZAT14<------NtERF2           <---------ARR14(2) ----------->HVH21 <---------ATHB12   -------   gtataccggacacgtcggctgtaagagacaaagagtatcagattctaacttgagcgtatccgacatgtcaccggccaatgaaagccagatgtcggtgaga  20652100                                        <---------AHL20(2)                                        --------->AHL20(2)                                      --------->TOE2(3)                                     --------->YAB1         <---------YAB1             <---------YAB1   <---------YAB1            <---------ARR11(3)                     --------->ANAC55(2)  <----------DOF2        <---------ANAC58              <---------ZAT6  --------->GLK1(2) ----->GLK1(2)           <---------ANAC58    --------->YAB1     <-----------HVH21 -----GLK1(2)         <----------DOF2<--------HAHB4    ----------------------->TaNAC69(2)         <-- ---->ARR10    <-----------GT1    --------->YAB1     ----------->GT1<---------ANAC55(2)         -----   ttctctttattgtgatttttcatgctttcttgatatttatcattaattcataaaacagtgtaaacttgtcaagtatctaaatactaacaagtatacaagt  20652200                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                -----                                                                                               ------                                                                                           <---------AHL20(2)                    <---------AtLEC2                                                       --------->AHL20(2)              --------->AHL20(2)                                                       <---------AHL20(1)           <--------HAHB4                                                              --------->ARR11(3)           --------->ATHB51                                                            --------->AHL20(2)           <---------ICU4                                                              <---------AHL20(2)           -------->ATHB1                                                              <---------ARR11(3)           --------->YAB1               --------->YAB1                                 --------->AHL20(1)          <---------ATHB12             <---------YAB1                               --------->AHL20(2)          --------->ICU4          --------->ARR11(3)                              --------->AHL20(2)        --------->WOX13(1)        <---------ARR11(3)                  --------->WOX13(1)  <---------AHL20(2)     ------->TEIL <---------AHL20(2)------>ZmHOX2a(2)              <---------ARR11(3) --------->AHL20(2) -------YAB1 <---------YAB1     <---------YAB1            <---------ICU4          <---------AHL20(2) ---->YAB1<---------ATHB51    --------->YAB1          --------->AHL20(2)         --------->YAB1<-----   ataaatgtatcaattattatttacatggacaactatgatctatgatactatttcaattcaatattgcaatatcaatctttttataaaaatatattaatta  20652300  Previous    Next  AGI:  At5g50720.1    Description:  ATHVA22E (Arabidopsis thaliana HVA22 homologue E). Identical to HVA22-like protein e (HVA22E) [Arabidopsis Thaliana] (GB:Q9FED2;GB:Q9LUE9); similar to ATHVA22D (Arabidopsis thaliana HVA22 homologue D) [Arabidopsis thaliana] (TAIR:AT4G24960.1); similar to hypothetical protein OsI_034972 [Oryza sativa (indica cultivar-group)] (GB:EAY81013.1); contains InterPro domain TB2/DP1 and HVA22 related protein (InterPro:IPR004345) Range:  from: 20650419    to: 20651778    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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