Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->DAG2                                                                          ---------->DOF2                                                                      --------------->AGL15                                                                      <---------------AGL15                                                                     <-----------------AGL1                                                                     <-----------------AG                                                                     ----------------->AG ------ZAT14                                 ----------->GT1         ----------------->AGL1 ----->ZAT14                           <---------YAB1                ----------------->AGL2 ----->ZAT18                     ------>ZmHOX2a(2)                   <-----------------AGL2        -- --->ZAT14   <---------REM1(1) <---------ARR11(3)              --------->AHL20(2)      <------------- --------AtSPL8                --------->ARR11(3)    <----------ID1  ----------------->AGL3  --------   actctgaaattgtagttgaagctctaacaaaatgatctattttgatattgaaaaaaaaacaaaaaaaaaatcccaaaaaaggcaaactaattgtactgaa  20634700                                                 ------------------------>ANAC81              <---------ZAT18             ----------->RAV1(1)              --------->ZAT14           ------>ZmHOX2a(2)              --------->ZAT18          <------ZmHOX2a(2) --------->ANAC58                     <---------ARR14(2) --------->ANAC58                     <---------ARR11(3)                                        ----- ------->MYB52(1)                     --------->ARR14(2)                             <---------DAG2-- --AtSPL3     <---------ZAT14         --------->ARR11(3)---------->DOF2              <----------DOF2 --->GT1     --------->ALFIN1    <<<<<<<ZML2--------->ANAC46              <----------ID1  <----------   aaaacgaaatgagaagtgcagaaacatagaaactagaacagatcccacaaaatgggaagaaaggaaaacaaaaaaaaaaacaaaaaactttttttctgtc  20634800                      <---------AHL20(2)                      --------->AHL20(2)              --------->ICU4             --------->ANAC58         --------->ANAC46         --------->ANAC58                                                   --------->AHL20(2)         --------->ANAC58        <---------AHL20(2)    <---------YAB1      --------->AHL20(2) ---->ZAT14  --------->ANAC58   --------->AHL20(2)  <---------YAB1       --------->TOE2(3) ------->ANAC46   --------->AHL20(2)           <---------TOE2(3)      <-----------GT1            ---- -GT1    --------->AtLEC2       --------->YAB1---------->DOF2   ----------->GT1              --------   tactcaattccaagcaagaattaaaaaaatgcaataaaaatgaaagattaaagtaagattataaacatgttattacattaaaaaaaactatagaataaga  20634900                                             ------>MYB46(1)                                             -------->P                                             --------->MYB52(1)                                           <---------MYB111(2)                                 --------->ARR14(2)  <---------ZAT6                                 <---------ARR14(2)--------->ZAT14                                ------>MYB46(1)--------->ZAT6                       --------->ARR11(3)  <---------MYB46(2)             <---------TOE1(3)  ------>MYB83--------->MYB55(1)    <-------GAMYB      <---------ARR11(3)  <---------MYB55(2)   <---------MYB46(3) <---------GLK1(1)    --------->MYB46(3)   --------->MYB52(2) --------->GLK1(1)    <---------MYB111(1)              ---------->DOF2        -- ------>DOF2 <---------TOE2(3)<---------MYB59------>MYB83 --------->At4g35610          ----------->GT1 ->YAB1 <---------ANAC46   <-----------GT1 --------->AtMYB61     >>>>>>>>>TBF1    ---------->DOF2  <-   aaagtttgttgtttgaaggttgagaaatcttaccaaatccatacacctaccagtagagtcagtagaagaagaaactccaaaagagaaagatgaaaatata  20635000                                                                                       <--------ATHB1                                                                                       ---------->DOF2                                                                                      <---------ATHB51                                                                            <---------At4g35610                                                                            --------->At4g35610                                                                       <---------RAP2.6(2)          ----------->GT1                                              --------->ALFIN1--------->YAB1     <----------ID1              <---------YAB1      --------->DAG2  <-----------RAV1(1)    ========= ------->AHL20(2)      ---------->DOF2              ---------->DOF2  --------->ALFIN1 <---------ATHB12 --------AHL20(2)  ---------->DOF2     <---------ANAC46 --------->ALFIN1  <---------ANAC46  <--------   aaaaaatgggacaagtgaaaaaaaagaaagagaagatgatggagtttagcaagagaaagtggagacaacaagtgtggctgctacttcaataatgcaaata  20635100                                                                                 <-----------GT1                                                                       <------------CBF                                                                   --------------->AGL15                                                            <---------AHL20(2) <----------DOF2                                                            <-----------GT1 <-----------GT1                                                        --------->ATHB12 --------->YAB1         <----                              <---------YAB1           --------->ICU4<---------AHL20(2)         <----        ---------->DOF2     --------->YAB1 --------------->AGL15   ==================================       <------ZmHOX2a(1)   <---------YAB1  <---------------AGL15   --------->TOE2(3)     ------>ZmHOX2a(1) ---------->DOF2           *TSS--------->YAB1     <---------TOE2(3)<----------DOF2      ------------- ==========================================================MADS_MADS <---------YAB1 <----------DOF2 < -------AGL15             <---------TOE2(3)========================================MADS_MADS<--------   agagaaagaggaaagagagagagaaattgatgataatagctattactaagttaagaaatgatttacttactttaattgtaactttactttcctgatttag  20635200                                                                               <---------WOX13(1)                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                         <---------MYB46(3)   <------------CBF                                                   <-----------RAV1(1) <---------AHL20(2)                                                   <---------MYB46(3) -----TOE1(3)                                                       <---------ZAT2 -----TOE2(3)                                                       <---------At4g35610        <----- ===MADS_MADS                                                       --------->At4g35610   <---------ANAC58 -->AGL15                             --------->DAG2       ---------->DOF2   --------->ATHB12  <----- ----------DOF2                      ---------->DOF2      <------ZmHOX2a(1) <---------YAB1<---------ANAC58 --DOF2   <---------YAB1 <----------DOF2       ---------->DOF2 ----------->HVH21     <----------DOF2   ggttttattgatatcattttttaaaaactttgagtaagaaaaagtgaagaaaagaatggaggaaagtgacagctgttgttgattgttcttttgcttactt  20635300                                                                                     <----------DOF2    <----------DOF2                                    --------->ARR14(2)        --------->ARR14(2)    <---------DAG2                --------->YAB1       --------->GLK1(2)         <---------ARR14(2) ----DAG2<----------DOF2    ------>NtERF2              <---------ARR14(2)        <---------ZAT14 -----DOF2            <-----------GT1       --------->ZAT14        <---------YAB1--------->ZAT14   tttcaacttttctttgtttatatttttctctgccattcatcaattctgaactctgagcatccgatttttatgaatgaacagagtatacttttgaaaattt  20635400                                                             ----------->GT1                            ----------->HVH21--------->ARR11(3)                         <-----------GT1     --------->AHL20(2)                  ------->TEIL               <---------AHL20(1)                               -------                 <---------CCA1(2)           <---------ARR11(3)                       <-----------GT1           --------->ARR11(3)                <---------AHL20(2)       <---------AHL20(2) <----------DOF2           <---------ARR11(3)                --------->AHL20(1)      --------->AHL20(2)---------->ID1      --------->YAB1 <----------DOF2        --------->AHL20(2) <---------YAB1   ----------->GT1   caaattactcataaatcttgtatctttttactgacccttatccaaaatatattagttttcaaattgtgatataaaatagatgtggttttttcttttttat  20635500           <---------YAB1        --------->ICU4      --------->YAB1               ----------->GT1                          --------->ANAC46     --------->ICU4              ---------->DOF2                           <---------At5g28300     <-     <---------YAB1       <---------AHL20(1)                               --------->RAP2.6(3)<------   --------->YAB1         --------->AHL20(2)                               <---------LBD16    -------  <---------YAB1          <---------AHL20(2)    ---------->DOF2    --------->MYB52(2)      <---------ANAC58 -->YAB1<---------YAB1    --------->AHL20(1)---------->DOF2 <------ZmHOX2a(1)              <---------ANAC58   aactatgatgatgatgaaaatgaaacaataaattggaaagtgatactaaagaaagaggtataggatgcttagttgtttacggcaaaaaacatagcatgtg  20635600  Previous    Next  AGI:  At5g50670.1    Description:  squamosa promoter-binding protein, putative. Identical to Squamosa promoter-binding-like protein 13 (SPL13) [Arabidopsis Thaliana] (GB:Q8LFW6;GB:Q9LUF4); similar to squamosa promoter-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G50570.1); similar to squamosa promoter-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G50570.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN77059.1); contains InterPro domain Transcription factor, SBP-box; (InterPro:IPR004333) Range:  from: 20632930    to: 20635127    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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