Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->DAG2                                ---------->DOF2                            <---------------AGL15                            --------------->AGL15                           ----------------->AGL2                       --------->ZAT14             -                           ----------------->AGL1                       <---------ZAT14           ---                           <-----------------AG                         <---------ZAT18          <---                           ----------------->AG            --------->ANAC58                     -----                           <-----------------AGL1          --------->ANAC58                     <----                           ----------------->AGL3        --------->MYB52(1)                     -----   ----------->GT1   --------->AHL20(2)      <---------------AtSPL3     --------->ZAT18         <---- ------YAB1<----------ID1  <-----------------AGL2  ----------->GT1     --------->ALFIN1    <<<<<<<ZML2   tgatattgaaaaaaaaacaaaaaaaaaatcccaaaaaaggcaaactaattgtactgaaaaaacgaaatgagaagtgcagaaacatagaaactagaacaga  20601400                                                                                --------->AHL20(2)       ------------------------>ANAC81                                          <---------AHL20(2)  --------->ANAC46                                                      --------->ICU4 ---------->RAV1(1)                                                    --------->ANAC58 --->ZmHOX2a(2)                                                    --------->ANAC58 ---ZmHOX2a(2)                                                     --------->ANAC58 ---->ARR11(3)                                        --------->ZAT14  --------->ANAC58    <---------AHL20(2) -----ARR11(3)                             <----------DOF2         --------->ANAC46       --------->AHL20(2) ---->ARR14(2)                             <---------DAG2--------->ANAC46   --------->AHL20(2) -----ARR14(2)---------->DOF2   <----------ID1  <-----------GT1    --------->AtLEC2       --------->YAB1   tcccacaaaatgggaagaaaggaaaacaaaaaaaaaaacaaaaaactttttttctgtctactcaattccaagcaagaattaaaaaaatgcaataaaaatg  20601500                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                                                                                          ------>MYB83                                                                                 <---------ARR11(3)                                                                       <---------TOE1(3)  ------>MYB46(1)                                  --------->AHL20(2)          <-------GAMYB      --------->ARR11(3)             <---------YAB1      --------->AHL20(2)          <---------MYB46(3) <---------GLK1(1)          <---------YAB1       --------->TOE2(3)             --------->MYB52(2) --------->GLK1(1)     <---------TOE2(3)      <-----------GT1            ---------->DOF2 <---------TOE2(3)<---------MYB59    ---------->DOF2   ----------->GT1              --------->YAB1 <---------ANAC46   <-----------GT1   aaagattaaagtaagattataaacatgttattacattaaaaaaaactatagaataagaaaagtttgttgtttgaaggttgagaaatcttaccaaatccat  20601600           <---------ZAT6         --------->ZAT14     --------->ZAT6   ------>MYB46(1)   -------->P   ------>MYB83 --------->At4g35610   --------->MYB52(1)  --------->MYB55(1) --------->AtMYB61 <---------MYB111(1) <---------MYB111(2)                                                ----------->GT1 <---------MYB55(2)                          ----------->GT1   <----------ID1              <---------YAB1 <---------MYB46(2)               ---------->DOF2        --------->AHL20(2)      ---------->DOF2 --------->MYB46(3)    >>>>>>>>>TBF1    ---------->DOF2  <---------AHL20(2)  ---------->DOF2     <---   acacctaccagtagagtcagtagaagaagaaactccaaaagagaaagatgaaaatataaaaaaatgggacaagtgaaaaaaaagaaagagaagatgatgg  20601700                                             --------->YAB1                                             <--------ATHB1                                            <---------ATHB12                                  --------->At4g35610                                  <---------At4g35610                                   <---------YAB1                             <---------RAP2.6(2)           ---------->DOF2            --------->YAB1                             --------->ALFIN1---------->DOF2      ---------->DOF2    *TSS--------->YAB1           --------->DAG2  <-----------RAV1(1)    <---------------AGL15              <---------YAB1          ---------->DOF2  --------->ALFIN1 <---------ATHB51     <------ZmHOX2a(1)  <---------TOE2(3) ------ANAC46 --------->ALFIN1  <---------ANAC46  ===================================================   agtttagcaagagaaagtggagacaacaagtgtggctgctacttcaataatgcaaataagagaaagaggaaagagagagagaaattgatgataatagcta  20601800                                       <-----------GT1                             <------------CBF                         --------------->AGL15                  <-----------GT1 <-----------GT1            <------------CBF                  <---------AHL20(2) <----------DOF2       <---------AHL20(2)              --------->ATHB12 --------->YAB1         <---------TOE2(3)             --------->ICU4<---------YAB1             <---------TOE1(3)        <---------TOE2(3)--------->TOE2(3)     ------>ZmHOX2a(1) <---------------AGL15   =====================================MADS_MADS ========================================MADS_MADS<----------DOF2                               ----- --------------->AGL15   <----------DOF2  <----------DOF2 <----------DOF2                      ------ ================MADS_MADS <---------AHL20(2) --------------->AGL15 <---------YAB1 <----------DOF2   ttactaagttaagaaatgatttacttactttaattgtaactttactttcctgatttagggttttattgatatcattttttaaaaactttgagtaagaaaa  20601900                                     <---------WOX13(1)                                    <---------ANAC58                                    <---------ANAC58                               <---------MYB46(3)                            <---------MYB46(3)                            <-----------RAV1(1)                          <---------At4g35610                 <---------DAG2                          --------->At4g35610        <---------DAG2                          <---------ZAT2        <---------ANAC58     ---------->DOF2 ----------->HVH21     <----------DOF2    <----------DOF2               --------- ---->DAG2       ---------->DOF2   --------->ATHB12  <----------DOF2            <-----------GT1 ---->DOF2      <------ZmHOX2a(1) <---------YAB1<---------ANAC58   <----------DOF2    ------>NtERF2   agtgaagaaaagaatggaggaaagtgacagctgttgttgattgttcttttgcttactttttcaacttttctttgtttatatttttctctgccattcatca  20602000                                                                                      ----------->HVH21                                                                                   <-----------GT1                                           <----------DOF2                  ------->TEIL             <---------ARR14(2)        --------->ZAT14                     <---------CCA1(2)             --------->GLK1(2)         <---------ZAT14               --------->ARR11(3)  --------->ZAT14        <---------YAB1--------->ARR14(2)            <---------ARR11(3) >YAB1       --------->ARR14(2)        <---------ARR14(2)       --------->YAB1 <----------DOF2   attctgaactctgagcatccgatttttatgaatgaacagagtatacttttgaaaatttcaaattactcataaatcttgtatctttttactgacccttatc  20602100                   ----------->GT1                                   <---------YAB1   <---------AHL20(2)                                             <---------YAB1   --------->AHL20(2)                                           --------->YAB1               --------   <---------AHL20(1)                               --------->YAB1--------->ICU4           ----------   --------->AHL20(1)                       <-----------GT1    <---------YAB1       <---------AHL20(1)   --------->ARR11(3)       <---------AHL20(2) <----------DOF2 --------->ICU4       --------->AHL20(2)   <---------ARR11(3)      --------->AHL20(2)---------->ID1  --------->YAB1         <---------AHL20(2)  --------->AHL20(2) <---------YAB1   ----------->GT1       <---------YAB1          --------->AHL20(1)   caaaatatattagttttcaaattgtgatataaaatagatgtggttttttcttttttataactatgatgatgatgaaaatgaaacaataaattggaaagtg  20602200                                  --------->ANAC46                                 <---------At5g28300     <-----------RAV1(1)        <----------------                                 <---------LBD16    ------->MYC3                --------->ARR11(3)  ---------->DOF2                --------->RAP2.6(3)<-------MYC3                <---------ARR11(3) --->GT1          <------ZmHOX2a(1)              <---------ANAC58           --------->ANAC46     <--- >DOF2---------->DOF2    --------->MYB52(2)      <---------ANAC58         --------->ANAC46 <---------MYB52(1)   atactaaagaaagaggtataggatgcttagttgtttacggcaaaaaacatagcatgtgaatgttgtgcttcgcattacacaacatcttcttctgtttttt  20602300  Previous    Next  AGI:  At5g50570.1    Description:  squamosa promoter-binding protein, putative. Identical to Squamosa promoter-binding-like protein 13 (SPL13) [Arabidopsis Thaliana] (GB:Q8LFW6;GB:Q9LUF4); similar to squamosa promoter-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G50670.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77059.1); contains InterPro domain Transcription factor, SBP-box; (InterPro:IPR004333) Range:  from: 20599309    to: 20601785    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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