Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->HSFB2a(1)           <---------HSFC1(2)           <---------HSFB2a(1)           --------->HSFC1(2)          <---------ARR11(3)          --------->ARR14(2)          --------->GLK1(2)          <---------ARR14(2)          <-----------ARR10         <---------GLK1(2)     --------->AHL20(2)                                       <---------ZAT14     --------->LBD16           --------->YAB1         --------->HSFB2a(2)               --------->ZAT14     --------->ZAT14    --------->At4g35610           <---------HSFB2a(2)               <---------ZAT18    --------->DEAR3(1)  <---------At4g35610          <---------LBD16             <-----------GT1   --------->ANAC46  <----------DOF2    <---------ARR11(3)                     <---------AHL20(2)   <   agaacaccgcagaatcttcttctctttgctgaattatatcaatatcaacttctaatctggaacatatatacaaaaacatatttaaaccagtttactcaag  20555800                                                                                             --------                                                                                  --------->CCA1(2)                                                                                 <---------ARR11(3)                                                                                 --------->ARR11(1)                                                                    ------->TEIL <---------GLK1(2)                                                                 --------->ANAC58--------->ARR11(3)                      <---------WRKY18(1)                        --------->ANAC58<---------ARR14(2)<-               ----------->HVH21   ---------->ID1              ---------->DOF2   --------->ARR14(2)--    --------->YAB1   --------->WRKY38(1)                --------->YAB1<---------DAG2  <---------AtLEC2 ---------AHL20(2)   --------->WRKY12     ----------->GT1 ---------->DOF2      ----------->ARR10   <-   aattaatagtaatctacatgacattgacctataatttggctcttaagtaaaacttgaatcaaaagttaagcacctttcaacaagatttgcataaaactta  20555900                                --------->ANAC46                                --------->ANAC58                              --------->MYB46(3)   <---------HSFB2a(2)                             ------->TEIL          ------>ZmHOX2a(1)                          --------->ANAC58     <---------ARR11(3)<---------TOE2(3)                          --------->ANAC58 --------->YAB1--------->ICU4 ->TOE2(3)     <---------ATHB12 --------->ANAC58   --------->HSFB2a(2) --------ARR11(3)         --------->ANAC46================HOX2a_HOX2a ------->ARR11(3)      ===================================HOX2a_HOX2a ----------ARR10       <------ZmHOX2a(2)  <------ZmHOX2a(2) <---------YAB1             --------->ATHB12   aaatctaatccagacaaatcactcgatcacgaaccagcaattcgatcaaaatcctagaaattatgttaagaaaacatctaatcggcaattcatttgattc  20556000                                                                                  --------->ZAT14                                                                                  <---------ZAT14                                                                          --------->ZAT14                                                                          --------->REM1(2)                                                                        --------->LBD16         <----                                                                        --------------->AtSPL8  <XXXX                                                                       <---------ANAC58         <----              <---------ARR11(3)                      <----------DOF2  <---------ANAC46         <----            --------->ANAC58                     ---------->DOF2       <---------ANAC58     <--------            --------->ANAC58            --------->GLK1(1)           <-----------GT1         <--------   gatcgactgaaaccaagaaattcaacaaaatcgcattgagagaaatctaagaaaagctttagaaaaaatttatccgtgtaccagttcaatggaggcttgc  20556100                                               <---------LBD16                                               --------->LBD16                                              <---------TOE2(1)                                              <---------TOE1(1)                                             ------>ZmHOX2a(2)                                            =============HOX2a_HOX2a                                            <------ZmHOX2a(2)                                            --------->CCA1(2)                                           --------->ARR14(2)                                    ----------->HVH21                                  --------->ANAC55(2)                                  <---------ANAC58 -----ANAC58                      <---------ANAC55(2) XXXXXXXXXXXXXXXXMIR832-3P        <---------ANAC58<------ZmHOX2a(1) -----ANAC46               --------->ANAC58--------->AGP1----------->GT1 -----ANAC58               --------->ANAC58<---------ARR11(3) -ANAC58                 ---------->DOF2   <---------ARR14(2)        *TSS    --------->GLK1(2)------- -ANAC58                --------->ANAC46 ----------->ARR10      --------->GLK1(2)      ----------->GT1   ttgggtttggaatttgaatttgttacacaaagcaattcgtgaccagatccgaggaaagtttgtgaaaatcggatgagaaattctgcgagggattaaaaaa  20556200                          --------->LBD16                         <---------LBD16                     <------MYB46(1)                   --------------->AGL15                     <------MYB83                   <---------------AGL15                   <---------ANAC58                  <-----------------AGL1     --------->At4g35610            <------MYB46(1)                  <---------At4g35610                                 ----            <------MYB83<---------LBD16   ---------->DOF2  <---------ANAC46                      ----           <---------AtMYB61             <---------ATHB12  <---------ANAC58     <---------MYB52(1) --->DOF2 <--------P ---------->DOF2 ------------>CBF  <----------DOF2<-----------GT1            ----   gaatagcaaggagttggtttacttaaaccgggaacaaatcccaattaagcagacgcgcttggctggttctgtttacaattcggttttgtaaacaaacaca  20556300                                                                                        -------------                                                  <---------AHL20(2)                    <------------                                              <---------CCA1(1)                        --------------                                              <---------RVE1(1)                        <-------------            --------->AHL20(2)               <---------ARR11(3)                        --------------            <---------AHL20(2)             --------->ANAC58                            <-------------           --------->AHL20(2)            <-----------GT1                            <---------DAG2  <     <-----------GT1                     --------->YAB1             --------->YAB1  <----------DOF2 <  ----------->GT1                     <---------ICU4                <<<<<<<<<<<<<<<<<LFY--------->YAB1 ----->ANAC46            --------->AHL20(2)--------->ANAC58      <---------ICU4<-----------GT1      - ----->ANAC58    ---------->DOF2  --------->HSFB2a(2)        --------->HSFB2a(2)   <---------DAG2  <- ----->ANAC58--------->WOX13(1)   <---------HSFB2a(2)        <---------HSFB2a(2)---------->ID1 ------   agaaatgtaacaaattaatcaaagaaaaaaaatgttctaaaaatcacgatattttttttgtttctagtaatcacaatggtttctcccttttcataaatgg  20556400 -->AGL15 ---AGL15 --->AGL3 ----AGL1 --->AGL2 ----AGL2---------->DOF2                                                            xxxxxxxxxxxxxxxxx -----------ARR10                                                        --------->YAB1 ---------ARR14(2)                                 --------->TOE2(3)  <---------GLK1(1)            -- -------->ARR14(2)                    <---------AtLEC2          --------->DAG2  <-------TEIL   <----- --------CCA1(2)  <----------DOF2 <---------AHL20(2)<----------DOF2   --------->GLK1(1)  ----------->GT1 ----->GT1 <-----------GT1 <-----------GT1      <-----------GT1---------->DOF2  ------->TEIL<XXXXXXXX   caaatctcccataaaaccatcttttgtattttctattttttcatggttattttcctttataaaaaaaaagggatatcatatgtacattgtatggttttta  20556500            <---------AHL20(2)            --------->AHL20(2)                                                                      -       --------->AHL20(2)                                                                        <---    --------->YAB1           <---------AHL20(2)                                                 <----   <---------YAB1<---------ARR11(3)          --------->ZAT6                                   <------ xxxxxx>smallRNA(si3)       --------->AHL20(2)                                                ------- ------->ARR14(2)--------->ARR11(3)   ----------->GT1                                --------->ZAT6-- ------GT1  --------->AHL20(1) ---------->DOF2                         --------->At4g35610    ------- XXXXXXXXXXXXMIR400 <----------DOF2 ---------->DOF2                    <---------At4g35610   --------   gtattctcataaaataaaatgtcttttgaatttaaaagaaaagaaaaacactaaatatgagttcagatttatgagctaattctaaaaacactaaaaaatc  20556600   <---------MYB52(1)   --------->At5g28300  ----------->GT1 <---------ATERF1(2) <---------MYB46(3) --------->ATERF1(2) -------->SPL7 ------RAP2.6(2)                                                                      --------->AHL20(2) -----LBD16                                                                          <---------AHL20(2) ---ARR14(2)                                                                         --------->AHL20(2) -->ARR14(2)                                       ----------->GT1   <---------MYB52(1)  --------->AHL20(2) ---->NtERF2                              <---------At4g35610        --------->At5g28300 <---------AHL20(2) -->GLK1(2)                   --------->ZAT6     ---------->DOF2    ----------->GT1--------->YAB1   - ->RVE1(1)           --------->ZAT6       --------->At4g35610    <xxxxxxxxxxxxxxxxsmallRNA(i)     ---   cggccggtaatttgagttcaaaaacactaaaaacactaaatatgagctcagaaaagaaaaacaattcgaccggtaatttgaacaaaaataaataaatccg  20556700  Previous    Next  AGI:  At5g50440.1    Description:  MEMB12 (Golgi SNARE protein membrin 12); SNAP receptor. Identical to Membrin-12 (MEMB12) [Arabidopsis Thaliana] (GB:Q9FK28); similar to MEMB11 (Golgi SNARE protein membrin 11), SNAP receptor [Arabidopsis thaliana] (TAIR:AT2G36900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67483.1); contains InterPro domain Vesicle transport v-SNARE; (InterPro:IPR007705) Range:  from: 20554751    to: 20556169    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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