Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------At4g35610                                                            <------MYB46(1)                                                            <------MYB83                                                           --------->MYB59  --------->ARR14(2)               ---------->DOF2         <---------AtMYB61  <---------ARR14(2)        ---------->DOF2       --------->ARR11(3) ---------------AGL1       <------ZmHOX2a(1)      <-----------ARR10                --------->TOE1(2) -----ARR11(3)            --------->ANAC46        <---------ARR11(3)               --------->TOE2(2) ---->ARR11(3)       --------->ZAT14             <---------CCA1(2)                 <---------LBD16 ----CCA1(2)         <---------ZAT14      --------->YAB1 <---------MYB52(1)       ----------->RAV1(2)   tctcgattcggcactggaatcagtttacaggaaagaccaaagaaacataacatatctcagtttggtctgatgctaagtttgtttacctgggaaccaagaa  20543300                                                    <---------CCA1(2)                 <-------TEIL                                                   --------->ARR14(2)               <-------PIF5                                                <---------ANAC46                    ------->PIF5                                                <---------ANAC58                   --------->ANAC46                                                ----------->GT1                  <---------ALFIN1 <--                                                <---------ANAC58              ------>ZmHOX2a(2)   <--                 ---------->DOF2          <---------AHL20(2)                <---------ARR11(3)    <--         <---------ANAC55(2)       --------->At4g35610                   <----------DOF2     <-------         ----------->GT1           <---------At4g35610                  <---------ANAC58     <-------      <---------ARR14(2)      <---------At4g35610  <---------ARR14(2)   <---------ANAC58     --------   caagaggggaaacgtgaataaaagcagagtgatgctgagctaaatttatggcgtatatatcaatttgagacagtgcttgatctccacgtccattttcgtg  20543400        ----------->RAV1(2) -------ANAC46 -------ANAC58            ---------->DOF2 -------ANAC58      ------->TEIL               ------>ZmHOX2a(1) --ANAC58     <---------TOE1(1)         <---------ARR11(3)                            ----------->HVH21 --ANAC58     <---------TOE2(1)       --------->ANAC58                <----------DOF2<-----------HVH21 ->ANAC55(2) --------->SPL7           --------->ANAC58   --------->ETT(2)      <----------DOF2   acttgaagacacctgtacgatgaaccatagaagcactaacaagaaattcctagccatcgtcgagagtgctaactttctcttctttgctgtgacagataga  20543500                                --------->ARR11(3)                                --------->GLK1(2)                                <---------ARR11(3)                               <---------GLK1(2)                      <---------ALFIN1                     <---------ALFIN1                     <---------ATERF1(1)                    <---------ATERF1(1)                    <---------ALFIN1                                      <---------RVE1(1)                   <---------ALFIN1                                       <---------CCA1(1)                   <---------ATERF1(1)                                   <---------ARR11(3)        --------->At4g35610---------->DOF2                               --------->ARR11(3)        ----------->GT1--------->ANAC46    <----------DOF2            <---------TOE2(2)   --------->YAB1 <---------ALFIN1     <-----------GT1                <---------TOE1(2)   tgaaatcagaagctaaaaccccccccccccaaagaatcttttgacctttcaaagattaaaactttccaatcgcatgatattttgaattttgaagactctt  20543600                                                                   <----------DOF2                                                                   <---------------AGL15                                                   --------->HSFB2a(2)                                                   <---------HSFB2a(2)      <------ZmHOX2a(1)                                              <---------ANAC58     --------------->AGL15                     <----------DOF2          <---------ANAC58    <-----------------AGL3       *TSS              <-------TEIL  xxxxxxxxxxxxxxxx>smallRNA(i)        <-----------GT1<------ZmHOX2a(1)-----   ggtttttgttctcaagtacatccctttctctccctccctccctcgaaggcgtttcagaacagaaattttctttttttaggaggaagacagagcatagaga  20543700                                   <------------CBF                                  <--------ATHB1                                  <---------ICU4                                  -------->HAHB4                                 --------->ICU4                                 --------->AHL20(2)                                 <---------YAB1                                 <---------AHL20(2)                                 <---------ATHB51                                <---------AHL20(1)                             <---------AHL20(2)                             --------->AHL20(2)              ----------->GT1                     <---------ANAC58                        <---------ANAC58                     <---------ANAC58                        <---------ANAC58 <---------YAB1        <                     <---------ANAC46--------->YAB1     <---------ICU4        --------->ICU4       <-         <----------DOF2     <---------AHL20(1) <---------ZAT18            <---------YAB1    <-------         <---------DAG2      --------->AHL20(1) --------->ZAT18         ---------->ID1   ------------ ---->ARR11(3)     <-----------GT1--------->ATHB51<---------At4g35610 <---------MYB46(3)>>>>>>>>>>>>>   acttgtgtctgctttttttttttacttgtaataaaataattgtaatcgagtgagcacataatgtcgtaacatttgttgtcattatcaaattcccaatgtt  20543800                 ------>MYB83                 --------->MYB52(1)                 ------>MYB46(1)                --------->MYB55(1)               <---------MYB46(2)    <----------DOF2    ------>ZmHOX2a(1)        ----------->GT1 ---------->ID1<---------MYB52(2)                                    <---------ANAC58 -----------GT1<---------MYB59  <-------TEIL                         <---------ANAC46  --------->YAB1 ----------GT1 <---------MYB111(1)                                   <---------ANAC55(2) --ATHB12     --------->ANAC55(2)    --------->AHL20(2)      <-------TEIL              <---------AHL20(2) >CBF       <-----------GT1 --------------->AtSPL8        <------ZmHOX2a(1)       <---------YAB1  --- >>>>LFY <----------DOF2    <---------------AtSPL8    ---------->DOF2<---------ANAC58  --------->AHL20(2)   tttatccttttcttttacctaacgttctaaatggtacataaaaatagccaattggaaaaaggatgcatattacttgaagaaattttcatttatatttcta  20543900                                                                                                    <                                                                                                    <                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                              -------                                                                                          --------->YAB1                                                                                          <---------ICU4                                                                                         --------->ICU4                                                                                        --------->AHL20(2)                                                                                        <---------AHL20(1)                                                                                        <---------AHL20(2)                                                                                       --------->YAB1                                                                                      <---------YAB1<                                                                                     --------->AHL20(2)                                                                                   --------->AHL20(1)                       <---------YAB1                                              <---------AHL20(1)                   <------------------------ANAC81                                --------->YAB1    <                <---------MYB52(1)                                               xxxxxxxxxxxxxxxxxxxx           <-----------GT1                                                      <xxxxxxxxxxxxxxxxxxxx         <-----------GT1--------->ATHB12                                     ------>MYB46(1)  <------       --------->HSFB2a(1)                    <---------AHL20(2)             ------>MYB83<---------YAB1       <---------HSFB2a(1)                    <---------YAB1               --------->TOE1(2)  ------- ---------->DOF2<----------DOF2            <----------DOF2       <---------AtLEC2xxxxxxxxxxxxxxxxxxxx ------>YAB1---------->ID1         <----------DOF2  ---------->DOF2 <-----------ARR10--------->AHL20(1)   tagtaaagaattttctccctttgttttgatttgttttcttttcatctttttattgaaagagaaatttgcatttctaacctacaaaaatattataattagg  20544000    --------->ZAT6 <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ---------MYB52(2) ------------MYB.PH3(2) -MYB46(1)                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -MYB83                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ----ANAC55(2)                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --->ANAC55(2)                                  <---------ICU4                   xxxxxxxxxxxxxxxxxxxx ----->GT1                                      --------->YAB1                   xxxxxxxxxxxxxxxxxxxx -->MYB46(2)                                    -------->HAHB4                --------->ANAC58 ---------MYB111(1)                            <---------ATHB51               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ---------MYB46(2)                           --------->YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxx>smallRNA(si3)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->ANAC46 xxsmallRNA(si3) ----------->GT1    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      --------->ANAC58 ---TOE2(3)     --------->DAG2      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -->MYB59      ---------->DOF2 <---------ANAC46--------->ICU4            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxx>smallRNA(fl3)       <---------YAB1     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxx   taactaacactctaaaaaaaagtaactaatattgtttgtattttctgtaataatgccaatactatccatgtttgaaatacacgctcttcatcttctccct  20544100                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                  <-----------GT1             --------->AHL20(2)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <---------MYB46(3)           ------>MYB83           <---------AHL20(2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <------MYB83           ------>MYB46(1)  ------>MYB83xxxxxxxxxxxxxxxx>smallRNA(s)       >>>>>>>>>MYB2        ------>MYB46(1)          <------MYB46(1)                    <----------DOF2 xx>smallRNA(le3)         --------->MYB46(3) --------->TOE1(2)<---------AHL20(2)     ------->TEIL xxx>smallRNA(fl3)  <----------DOF2  <----------DOF2<---------AtMYB61        <----------DOF2 xxx>smallRNA(se3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <---------YAB1    <---------DAG2 <---------YAB1   tccatagaaaaccaactattctctttcaccaactattaacttttgaacatgggattggttctaataaaatccagtctaccttttatgaagcttttgattt  20544200  Previous    Next  AGI:  At5g50400.1    Description:  ATPAP27/PAP27 (purple acid phosphatase 27); acid phosphatase/ protein serine/threonine phosphatase. similar to ATPAP24/PAP24 (purple acid phosphatase 24), acid phosphatase/ protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT4G24890.1); similar to calcineurin-like phosphoesterase family protein [Arabidopsis thaliana] (TAIR:AT1G13750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41861.1); similar to putative metallophosphatase [Lupinus luteus] (GB:CAD12839.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO68296.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains Inte Range:  from: 20540801    to: 20543695    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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