Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     -------->P                                       <                                                   ------>MYB46(1)                                  -                                                 --------->AtMYB61                                 <-                                         ----------->RAV1(1)                                      ---                           --------->MYB46(3)    <---------MYB111(1)                              ---                           <---------MYB55(2)   --------->DEAR3(2)          <----------DOF2      ----                        ---------->DOF2 <---------ALFIN1                <---------ALFIN1         ----                  --------->TOE2(2)     --------->AtMYB61           ------>MYB46(1)      <---------ARR14(2)                 --------->MYB46(3) --------->MYB46(3)          --------->ARR11(3)       --------->ARR14(2)            --------->At4g35610  <---------MYB52(1)------>MYB83 <-----------ARR10     --------->ANAC55(2)           <-----------ARR10--------->AtMYB61   --------->MYB46(3)  ------>MYB83      <---------ANAC55(2)       --------->YAB1 --------->LBD16  --------->MYB46(3)       <---------ARR11(3) <---------ARR14(2) --------DOF2<---------MYB52(2)  --------->DOF5.7(2) ------->GAMYB--------->AtMYB61--------->ARR14(2)   ctttcagtatcagcatctaacctccgtaaaccaccgttaccaccaccagaaccaaccctagaaacagaccttcccctcctttgcgaattcgtaacctctc  20518500            --------->RAP2.3(2)            --------->RAP2.6(2)            --------->LBD16           <------NtERF2           <---------LBD16           --------->ATERF1(1)          <---------ATERF1(1)          ------>NtERF2          --------->ABI4(1)         --------->RRTF1(2)         --------->RRTF1(3)         --------->RAP2.3(3)         <---------DEAR3(1)         --------->DEAR3(1)         --------->ATERF1(2)         --------->RAP2.3(2)         <---------ATERF1(2)        --------->RRTF1(1)        --------->ATERF1(1)        --------->RAP2.6(1)        --------->ERF1        --------->DEAR4(2)        --------->ORA47(2)        --------->RAP2.3(1)       --------->ABI4(1)       ------>NtERF2       <---------ATERF1(1)      --------->DEAR3(1)     --------->DEAR3(2)     --------->ATERF1(1)     --------->MYB46(3)    --------->SPL7    <---------ATERF1(1)   <---------ARR14(2)                         <---------At4g35610   --------->ARR14(2)                         --------->LBD16  <---------SPL7                             --------->ANAC46  <---------MYB52(1)                        <---------LBD16 <---------ATERF1(1)           <------ZmHOX2a(2) <---------DEAR3(2)            =============HOX2a_HOX2a ---------ATERF1(2)           --------->ARR14(2) -------->ATERF1(2) --------->TOE2(3)  <----------DOF2 --------LBD16 --------->ARR14(2)    ------>ZmHOX2a(1) --->NtERF2--------->RAP2.3(1)--------->ARR11(3)                    <------NtERF2 ------>LBD16 <------NtERF2   <---------ARR11(3)                   --------->LBD16                <-- ----->ANAC46--------->LBD16  <---------ARR14(2)                  --------->DEAR3(1)        --------- ----->DEAR3(1)<---------GLK1(2)------>ZmHOX2a(2)                <---------LBD16            <--------   cgccggtaccgccgccggaatttcttaaaccagatcgtcctctttctccgctactaatctcgctctcgccggagaacgattcaaaaaactcgacagctaa  20518600                          <---------GLK1(2)                          --------->ARR14(2)                          <---------ARR14(2)                                                    -----                       <---------HSFB2a(2)                                              --------->LBD16                       --------->HSFB2a(2)                                            ------>ZmHOX2a(2)                    --------->ARR14(2)                                                <---------LBD16                    <---------ARR14(2)                     =================================HOX2a_HOX2a                    --------->GLK1(2)                      ------>ZmHOX2a(1)         <------ZmHOX2a(2) -------ATHB12     <---------ARR14(1)                      ==================================HOX2a_HOX2a >At4g35610     --------->ANAC46            <------------MYB.PH3(2)                 <---------ARR14(2) -At4g35610   <-----------GT1   ----------->HVH21<----------DOF2   <-----------HVH21--------->ARR14(2)   atcatcgaggctaatttcaccgaatccagaacctctcacggtgttaacaaactttcccttcctcatcggagtcacttcaatgtctggatccggcatgcgg  20518700                                             --------->ZAT14                                           --------->LBD16                                   --------->WRKY12                                 --------->At4g35610                        <---------TOE2(2)                                 --------->ZAT2                         <---------LBD16     ---------                              ---------->DOF2--------->REM1(2)       <---------ALFIN1       <--------                            <---------HSFC1(1)                     <---------ALFIN1         =========                            <---------HSFB2a(2)                   <------NtERF2--------->ARR14(2)                            --------->HSFB2a(2)  ----------->GT1 ------>NtERF2<------ZmHOX2a(1)    --                            ------>ZmHOX2a(1)<---------ZAT14    --------->ANAC46            ---------                    <---------MYB52(1)    <---------ANAC46     <------NtERF2<---------TOE1(2)   <----                   --------->LBD16 ----------->HVH21          <---------ATERF1(1)           =========    --------->MYB52(1)      --------->HSFC1(1)   <---------ZAT6--------->ATERF1(1)          <-------- ---->At5g28300  <---------LBD16 <---------At4g35610         <---------DEAR3(1)<---------ARR14(2)<---   tgagagaaacggctcaaactccggtgtctcctagaagctgacctccgtgtagagtaagaagagtcgtcgccactctcggaggatttggctagagacgtcg  20518800                                                                                 <---------HSFB2a(1)  <----------DOF2                                                                <---------HSFC1(2) >O2                                                                            <---------YAB1 -O2                                                                       --------->At4g35610 ============bZIP_DOF                                                      <---------At4g35610 ------->MYB52(2)                                       --------->ZAT6   <------ZmHOX2a(1) >TGA1a                                             <------NtERF2      --------->ALFIN1 -----SPL7                    <------NtERF2        --------->ANAC58   <------ZmHOX2a(1) ============bZIP_DOF       --------->RAP2.6(2)    --------->ANAC58 --------->ALFIN1 -TGA1a             --------->At4g35610          <------ZmHOX2a(1) <------ZmHOX2a(1) ------MYB52(1)  ---------->DOF2             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->ATHB12   ttcgcttcatcgttgaattgaaagcagaagtcgccattggaagagaaggaaggaggcaactctactggaggaggaggagcggatgattcgacattttgaa  20518900                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                           --------->ICU4                                                                                       <---------MYB52(1)                                                                                       --------->DOF5.7(2)                                                                                      --------->TOE1(3)                                                                                      --------->TOE2(3)                      <------------CBF           <---------AHL20(2)                  ----------->GT1                   ------------>CBF          <---------AHL20(2)                      <---------ANAC55(2)                <------ZmHOX2a(1)            --------->AHL20(2)                <---------AHL20(2)      *TSS    <---------TOE2(3)         ------------>CBF                    --------->AHL20(2)    <--     <---------At4g35610         --------->CCA1(2)                          <---------AHL20(2)<------     --------->At4g35610      <---------YAB1<---------ATHB12      <-------TEIL --------->AHL20(2)<---   attgttgagctgttttgaggaatcaattgcatatgatatgctcccaattaattcatttttgacttaaatgcattcgaattttttaatacgttaattattt  20519000                    ------->TEIL                 <---------YAB1               --------->YAB1                                                        <----------DOF2     --------->TOE2(3)                                                               ------>ZmHOX2a(1) -ICU4         <---------ICU4                             <----------DOF2         ---------->ID1 -AHL20(2)    <---------ATHB12               <---------ANAC58                    <-----------GT1 >ATHB51      <---------ATHB51               <---------ANAC58                   <-----------GT1 >AHL20(2) --------->AHL20(2)                <---------ANAC46                  <---------AHL20(2) ---------GT1 --------->ICU4        <---------AtLEC2      <---------DAG2      --------->AHL20(2) ---YAB1  <---------ATHB12    <---------AHL20(2)         <---------DAG2   --------->AHL20(2)  ------- --------GT1--------->WOX13(1)--------->AHL20(2)      <-----------GT1     <---------AHL20(2)  <------   ttccatttcttaatcaattatgaatatgccaattttttgtatggtattcgtgtattatacctttttgaagaatttataaattttatcctttttttttaag  20519100                                                                              <---------AHL20(1)                                                                              --------->AHL20(1)                                                                            <---------AHL20(1)                                                                            --------->AHL20(1)                                                                         --------->AHL20(2)                                                                    --------->At5g28300     <--------                                                                    <-------GAMYB<---------AHL20(2)              <-----------GT1                                      ----------->GT1        <---------YAB1            --------->AHL20(2)                                    <---------TOE1(3)      <---------AHL20(1)         <---------AHL20(2)                                       <---------TOE2(3)<---------AHL20(2)       <---------AHL20(2)                                        <---------At5g28300<---------YAB1       --------->AHL20(2)      <---------MYB52(1)   <---------REM1(1)    --------->YAB1  <---------AHL20(2)   --------->AHL20(2)   <---------AHL20(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------AHL20(2) -------->AtSPL8        --------->AHL20(2)  <---------AHL20(2)  <-----------GT1<---------AHL20(2)   - ---------AtSPL8     ------->TEIL <---------YAB1  --------->At4g35610   <---------YAB1 <---------YAB1   tacaaaaatataaatttaacatgtattttattcgttatatttggatttaatcagttgtagttgtatttacggttataatatatatttttattattttttg  20519200                                                                                                  <--      <---------AHL20(1)             <---------ARR11(3)                                       -------      --------->AHL20(1)             --------->ARR11(3)                                      <-------      <---------AHL20(2)          <---------AHL20(2)                                         --------      --------->ARR11(3)          --------->AHL20(2)                             --------->AHL20(2)    <---------AHL20(1)      <---------MYB59                     --------->ANAC55(2)   --------->TOE2(3)    <---------AHL20(2)   <-----------GT1                        <---------ANAC55(1)   --------->TOE1(3)   --------->YAB1   --------->ARR11(3)                <---------YAB1             <---------AHL20(2) <  <---------YAB1    <---------ARR11(3)             <---------MYB52(1)      <---------MYB59  --------- -AHL20(2)          <---------AHL20(1)          ---------->ID1  <---------ANAC55(2) <---------ARR11(3) -------->YAB1      --------->AHL20(1) --------->TOE2(3)        --------->ANAC55(1) --------->ARR11(3)   agttataatattttgtatagaatatttttaccaaaataaaatcttattttgtcgttatatttgaatacgtattcttaccaaaataaaatcttaaatatat  20519300                      --------->ARR11(3)                      <---------ARR11(3)                      <---------AHL20(1)                      <---------AHL20(2)                      --------->AHL20(1)                      --------->AHL20(2)                                                            <      <---------ANAC55(2)                                                                        <---      --------->ANAC55(2)  ----------->GT1                                                    <------ -------AHL20(2)   --------->AHL20(2)                      <---------AHL20(2)                 <------ -->AHL20(2)     --------->AHL20(2)                        <---------AHL20(1)            --------->AHL20(1) --AHL20(1)     --------->YAB1                 --------->YAB1                            <---------ARR11(3) ->AHL20(1) --------->AHL20(2)                 <-----------GT1  <---------AHL20(2)       <---------AHL20(1) ---------TOE2(3)--------->AHL20(1)         --------->YAB1 --------->AHL20(2)       <---------TOE2(3) >AHL20(2)  <---------AHL20(2)        ----------->GT1--------->YAB1                <-----------GT1---   ataatgttaagtattaaaaaataatatattcgtaaaattttagtaaaaataacaattttaaaaaatttaagtgaaaatgcaaaattaacaatatttttta  20519400  Previous    Next  AGI:  At5g50350.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO38827.1) Range:  from: 20515702    to: 20518906    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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