Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <-----------GT1                                       <---------ICU4                                       <---------AHL20(2)                                      --------->ICU4                                      --------->AHL20(2)                --------->ARR11(3)                                 ------>MYB46(1)                        --------->GLK1(2)                                 ------>MYB83                ----------->GT1                               <---------MYB59          --------->CCA1(2)                              <---------ANAC55(2)      --------->ARR11(3)                              --------->ANAC55(2)      <---------ARR11(3) --------->TOE2(3)                    --------->YAB1  <---------ICU4 ---------->DOF2      <-----------ARR10   --------->AHL20(2)       <-----------GT1     --------->AHL20(2)      <---------ARR11(3)     <-----   gaaaaaaaaatacaatagaaaaacataatattacctaatatttattacattttaaaagatatatagaaaaacaaaatcttagtttcgacgatggaatttt  20472100                                                                                  --------->ICU4                                                                                --------->AHL20(2)                              --------->TOE2(3)                                --------->AHL20(2)                              <----------DOF2                        <----------DOF2                        ------>MYB46(1)                              <---------DAG2               ---   --------->AHL20(2)   ------>MYB83              <<<<<<<<<<<<<<<<<LFY       --------->YAB1 --------- ----AHL20(2)         <---------MYB59       ----------->GT1  --------->ARR11(3)<---------AHL20(2) <--   tttttttatatagaacatcacataccaaataactttagttctcttattgtgaaaacaatggaagaaattgactttttaaaaataattttgaaattgattt  20472200                                                                            <---------DAG2                                                                            <----------DOF2                                                                        --------->ANAC58                                                                        --------->ANAC46                                                                        --------->ANAC58          ---                                                                       ------->TEIL               ---                                                <---------ANAC55(2) --------->ANAC58              <--                                              --------->MYB52(1)    --------->ANAC58             <---                                        ---------->DOF2            ------->MYC2                 -----             ------>MYB46(1)      ----------->GT1--------->TOE2(3) <-------MYC3                 <----           <---------MYB46(2)   ----------->GT1<---------TOE2(3)   ------->MYC3                <----- ------------------>WRI1        <---------ANAC46----------->GT1 <---------ALFIN1         --------->YAB1 >ATHB12   <---------MYB59  <---------YAB1    <---------DOF5.7(2)  <-------MYC2         <---------YAB1 --------DOF2------>MYB83--------->AHL20(2) --------->ARR11(3)----------->RAV1(1)     --------->YAB1   ctttgttcacataccaaacaacttcgttttattatcgtgaaaaaaagataacgtaaatggttagccacacatgcacggcttttccaaattatcataagga  20472300                                        <---------ATHB12         ---------->DOF2                <---------YAB1  --------->ARR14(2)                  --------->WOX13(1)                          ----------->GT1 --->ZmHOX2a(2)                      <---------AHL20(2)                      ----------->GT1   <----- -------------->AGL3                 --------->AHL20(2)                   <---------STY1(2)    <----- -----TEIL                     --------->ANAC46       <---------ANAC55(2) --------->STY1(2)    <----- ---ZmHOX2a(2)        --------->ANAC55(2)<---------ICU4      --------->MYB52(1) ---------->DOF2<----- ---->ARR14(2)        <---------ANAC55(2)--------->YAB1   --------->YAB1------>ZmHOX2a(1)     ------- -----ARR14(2)       <-------TEIL--------->ICU4  ----------->GT1   <---------GLK1(1)      <---------- -ZmHOX2a(1)    --------->AHL20(2)<---------ICU4<---------TOE2(3)  --------->GLK1(1)  --------->AHL20(2)   tccatatttgtaaaagaaaaaaatacataatccacataattaatcatagtgaggttacatgaataacagagttcctagctagtaaagataaattgttgcg  20472400                             <---------ANAC58                      <-----------GT1                      --------->ZAT6                     <---------YAB1                    <-----------GT1                   --------->YAB1                   <---------ICU4 ----ANAC55(2) --------->AHL20(2)                                           <---------At4g35610 ----ANAC58    <---------AHL20(2)                                --------->AHL20(1) ----ANAC58   <---------WOX13(1)                                 <---------AHL20(1)   ------>NtERF2 ----ANAC46<---------YAB1    --------->ANAC55(2)                <---------AHL20(2)   --------->DEAR3(1) -------->AtSPL3  --------->ICU4          <---------AHL20(2)  ----------->TBP     --------->DEAR3(1)< -RAV1(1)<----------DOF2     <---------ANAC58         <-----------GT1       --------->At4g35610------   tacaagttgtgctttgattaattatcactatacgtgcttcatataaaaatgtcattttacacttatatatattaagtcatctcatcgccgactatttccc  20472500           <---------YAB1          <------------CBF         --------->ATHB51         <---------ICU4         --------->YAB1         -------->ATHB1         <--------ATHB1         --------->ATHB12        <---------YAB1        <---------ATHB51                                     <---------AHL20(2)        --------->ICU4                                      --------->AHL20(2)        <---------ATHB12                               ------>NtERF2      --------->WOX13(1)                              --------->ANAC46     ------------>ATHB5                           <---------ANAC46    ------------>CBF           ----------->GT1    <---------ANAC58   --------->TOE2(3)          --------->DAG2  <---------ANAC58                   --------->YAB1<-----  --------->YAB1             ---------->DOF2  <---------ANAC58                  <---------ATHB51   <- ---------ARR11(3)       --------->YAB1     --------->ARR11(3)          --------->DAG2      --------- ----------->AG       --------->YAB1       *TSS   <---------ANAC58     ---------->DOF2      <--------   aaaatcatcaattattgttaccaagaataagaaaagtaaaatgagagagcttgcttgcgccattaaatcaacataaagttcaattatagtttgaaatctt  20472600                                                                          --------------->AGL15                                                                          <---------------AGL15                                                                         <-----------------AGL1                          <-----------HVH21                              <-----------------AG                         --------->ANAC46                              <-----------GT1            <--                         --------->bZIP60(2)                        <----------DOF2      <---------YAB1         <---------MYB52(1)              <---------ARR11(3)         ------>ZmHOX2a(1) <---------DAG2  ------->TEIL      ------->TEIL         --------->ARR11(3)        --------->TOE2(3)  <----------DOF2 -----DOF2      <---------TOE2(3)  --------->TOE2(3)        --------->ANAC46 <----------DOF2      --- --------YAB1 --------->AHL20(2)   --------->TOE1(3)        --------->ANAC58 <---------DAG2    <----- >ARR11(3)    <---------AHL20(2) -------->P <----------DOF2 --------->ANAC55(1) --------------->AtSPL8 -ARR11(3)--------->AHL20(2)  <---------MYB52(2)            --------->ANAC58<---------DAG2     ------   tatgaatctccattaattaatgtatccatgtcactaaccttgaaatctttgttgaatcccacaagtaatcctttaaccccttttggtacttttcattaca  20472700                                                                                                    -                                                                                                  ---      --------->YAB1                                                          --------->MYB46(3)  --- <-----------TGA1                                                <---------YAB1         --------->YAB1 -------ARR14(2)                  --------->YAB1         <----------DOF2      <---------MYB52(2)  --- ------>ARR14(2)            ------->TEIL           <----------DOF2<---------ICU4       <---------ATHB12 ----ANAC55(2)             <---------CCA1(2)  <-----------GT1    --------->ICU4------->GAMYB  ------- --->ANAC55(2)      >>>>>>>>>>>>>>>>>LFY    <---------AHL20(2)   ------>ZmHOX2a(1)   --------->WOX13(1)   tatcgtcatcacaataacctctcaccaatgtatctataatccctatataaacactttctctttagtcctgattaccatcaacaaactcaatcacaatcac  20472800                                                            <---------ANAC58                                                            <---------ANAC58                                                        <---------ANAC58 -------->AHL20(2)                                      <---------AtLEC2 ------>ANAC58                               <---------ANAC58                               --------- -------->GT1<-----------GT1                 <---------ANAC58   <---------YAB1              <-------- ------>ANAC58 <---------YAB1        --------->AHL20(2) <---------ANAC58        ---------->DOF2 <---- -->YAB1  --------->YAB1            <----------DOF2 <----------DOF2          --------->TOE2(3)  -----   aagtaaatacaaaaatcaccatagaaaaatatgaagcgatttattgttcttgcgctttgcatgcttatggttcttgaaaccacaaagggtttagatttcc  20472900                                                                     <---------ANAC58                                                             <---------ALFIN1                                                            <---------ZAT14      --------->ARR11(3)          <---------At4g35610      <---------ALFIN1  ---------->DOF2                 --------->At4g35610   <-----------GT1  <------ZmHOX2a(1) >GLK1(1)                       <---------PCF2      <------ZmHOX2a(1)<---------ANAC46 -GLK1(1)                <---------ANAC58       <---------MYB46(3)   <---------ANAC58               < -----HSFB2a(2)          <---------ANAC58      --------->ALFIN1 <-----------RAV1(1)                <- ---->HSFB2a(2)          <---------ANAC46 --------->MYB52(1)--------->ZAT14           ---------->DOF2   ataacaaagatgtggaatcagagaatagcttgtgggagctatacgaacggtggaggagtcaccacactgttgctaggagccttgaagagaaagctaagag  20473000  Previous    Next  AGI:  At5g50260.1    Description:  cysteine proteinase, putative. similar to cysteine proteinase, putative [Arabidopsis thaliana] (TAIR:AT3G48350.1); similar to Vignain precursor (Cysteine endopeptidase) (GB:O65039); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201) Range:  from: 20472543    to: 20474255    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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