Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->TOE2(3)                                                                 --------->GLK1(1)                                                                 <---------GLK1(1)                                      <----------ID1    <-----------GT1          <---------ZAT2                                    --------->DAG2   <---------AHL20(1)          --------->ZAT2              <---------ATHB12     ---------->DOF2   <---------ARR11(3)  --------->ZAT6  ---------->DOF2   agttccaattttctcaaccatttggattcaaatgtcaaaaagcacaaattagcaatatatacctctgaaatctcaacagtaccagcttgttcaaagagca  20470800                                                                        --------->GLK1(2)                                                                       <---------GLK1(1)                                                                       --------->GLK1(1)                                                                    <---------HSFB2a(2)                                                                    --------->LBD16                                                                    --------->HSFB2a(2)                                                                   <---------LBD16                                                                   <---------ANAC46                                                                  <------NtERF2                                                                  <---------LBD16                         --------->ANAC58                       <---------PCF2                         --------->ANAC46                       --------->ARR14(2)                         --------->ANAC58                      <------NtERF2                        --------->SPL1(2)                     --------->ABI4(2)                        --------->SPL7                        ------>NtERF2                       --------->SPL1(1)                      <---------ATERF1(1)                       <---------SPL1(1)                     <---------DEAR3(1)                      <---------SPL7                         --------->ALFIN1                     --------->TOE1(1)                     --------->LBD16                     --------->TOE2(1)          <-----------GT1--------->ATERF1(1)                    <---------------AtSPL3  --------->ATHB51<---------MYB52(1)<---------ALFIN1               --------->YAB1  --------->HSFC1(2)        <---------LBD16<---------ARR14(2)   --------         <---------WRKY18(1)   <---------HSFC1(2)<-----------GT1<---------ARR14(2)           --------  ---------->DOF2  <------------------SPL14 --------->AHL20(2)<---------MYB46(3) --------->DEAR3(1)   tagctaaagcttgactatcaacatcgtacggcaagtttccgacgaataatttagcctcttccggtggctccgggaatccaacaccgtcttcagactcgaa  20470900                                                                                               <-----                               <---------ANAC58                                             <--------                              --------->HSFC1(2)                                          -----------                              <---------HSFC1(2)                                         --------->MYB46(3)                              --------->HSFB2a(1)                                   --------->ANAC58                              <---------HSFB2a(1)      ------>ZmHOX2a(1)            ----------->GT1       --------->ZAT14 --------->TOE1(2)              --------->TOE2(3)             --------->ANAC58       <---------ZAT14 --------->TOE2(2) <---------ALFIN1 <---------At4g35610     ---------->DOF2 ->ANAC58            ------->TEIL       ------>ZmHOX2a(1) --------->At4g35610   --------->ANAC58 ->ANAC58       <---------ZAT14<---------ANAC58  <<<<<<<<<TBF1                  --------->ANAC58 ----   actctcatctacagtgactgaagtacctccgatgcttccatcctcaccttcttcttcctcagcccaattcgaagtttgggaaacgaaagtaacaacagga  20471000                                                            <------ZmHOX2a(1)                                                           <----------ID1              <------ZmHOX2a(1)                                                      <------ZmHOX2a(1)             <---------At4g35610                                                <---------ANAC58                 <-------TEIL-------- -ZmHOX2a(1)                                    <---------ANAC58                --------->GLK1(2) ---RAV1(2)                              <-----------GT1  <---------TOE2(3)  ----------->ARR10 >RAV1(1)                                --------->MYB52(1)----------->GT1--------->At5g28300<------- ----->At4g35610                --------->ALFIN1<---------ANAC46    ---------->DOF2 --------->At4g35610   gatgagttacgaagagttttggatttgagagagagtgtgagattaacgggtcgtgaggataaggaaaaattgaagcggtgagattcagaggacgagatgt  20471100                                                                     <--------P              --------                                                            <---------TOE2(3)                <-------   --------->CCA1(2)            <------ZmHOX2a(1)       <----------DOF2                      <------- ->ARR11(3)        --------->DAG2                  ---------->DOF2  <-------GAMYB           <-------- --ARR11(3)       ---------->DOF2        <-----------HVH21  <---------TOE1(3)               <--------   tgaagatagaaggaatacaaaaaagggtcgaagaggaagaattcgtcatagctaaaagctttaagcttggggttagtactgaagaagtcatttttctgat  20471200            --------->At4g35610              <---------AHL20(2)                             <--------            <---------At4g35610           --------->AHL20(2)                        <---------ARR11(3) ------->AGL15                           --------->AHL20(2)                         <---------AHL20(1) --YAB1   <-----------RAV1(2)          --------->YAB1      <---------YAB1           --------->AHL20(1) --------AGL15                       --------->AHL20(2) --------->GLK1(2)          <---------CCA1(2) ---------AGL3       <------ZmHOX2a(1) *TSS  --------->AHL20(2)       <---------TOE2(3)   ----------- ---------AGL2----------->HVH21  ----------->GT1 ----------->GT1     ---------->DOF2--------->ARR11(3)   tttggagagattacaggtgaagaggaagaagagtgagataaaaataaaaaaatgttataatctgattagactaaagtttagtctaatatcttatataaac  20471300                                                                     --------->AtMYB61                                                              -------->P                                                              ------>MYB46(1)                                                            <---------MYB111(1)                                                            <---------MYB59                                                            --------->AtMYB61                                                          ------>MYB46(1)                   <---------ANAC58                       ------>MYB83                   <---------ANAC58                     --------->MYB46(3)                   <---------ANAC55(2)                  --------->DREB2C(2)                   --------->ANAC55(2)                  <---------MYB46(2)                         <-        <------------CBF                                --------->DEAR3(1)               <---------ZAT18       --------->ATHB12                       ------>ZmHOX2a(1)--------->ANAC46          --------->ZAT18       -------->ATHB1 <---------WRKY18(1)    --------------------->WRI1                  <---------ZAT14       --------->ATHB51            <-----------TBP      --------->DEAR4(1)               --------->ZAT14   <-----------------AGL3------------>CBF    --------->TOE2(3)------>MYB83           <---------------AtSPL8 -AHL20(2)     <----------DOF2    <----------DOF2      --------->DEAR3(2)     --------->ZAT6 -------- >TBP <---------YAB1 ----------->HVH21    <-----------GT1--------->ORA47(1)  <---------TOE2(3) ------   agtaatctattattgggccttacttgacccaataggcttttatatttccttattcacaccgacctactccaccaaaattaagactatatagtacacaaag  20471400                                                      --------->MYB52(1)                                                     <---------SPL7                            <---------DAG2         <------NtERF2                  <----------DOF2                 <---------ATERF1(1)                 <---------ANAC58                 ------>NtERF2                 <---------ANAC58                <---------DEAR3(1)              <---------GLK1(1)                  <---------ATERF1(2)              --------->GLK1(1)                  --------->DEAR3(1)      --------->HSFB2a(2)   <----------DOF2      --------->ATERF1(2)      <---------HSFB2a(2) ------>NtERF2         --------->DEAR3(2)  <---------MYB52(1)   ------>ZmHOX2a(1)      --------->ANAC46            --------->HSFB2a(2) ----------------------TaNAC69(2)           ---------->DOF2       --------->AHL20(2)          <------ -->DOF2     <---------ARR11(3)      <------NtERF2--------->LBD16 <---------AHL20(2)   <---------GLK1(2) ---->DOF2   --------->ARR11(3)    <---------ANAC46--------->ATERF1(1)    <---------HSFB2a(2)<-------   agccgtttctagcaagatttctttcctcggccttatcgcgtcgaattcaagccggcgaacgaatacatttatttttctgaaacaagatggattatcggtt  20471500                                                                 --------->At4g35610                                                                 <---------ZAT2                                                                --------->MYB52(2)                                                          <---------ANAC46               --------->ANAC46                           <---------ANAC58         <---------CCA1(2)               --------->ANAC58                          <-------TEIL         <------NtERF2         --------->ANAC58                               --------->ALFIN1      --------->LBD16         --------->ANAC58                        <---------ANAC46<---------At4g35610<-----------GT1     <---------HSFB2a(2)                         --------->bZIP60(1) <---------ANAC46   <------------ <---------ARR11(3)     ----------->HVH21        <---------bZIP60(1) --------->ALFIN1  <----------DOF2 <---------GLK1(2)    --------->YAB1   <----------DOF2<---------ANAC46      <---------LBD16 -----HVH21    --------->ANAC58      <---------------AGL15<---------ANAC58--------->ARR14(2) --MYB46(3)  --------->MYB52(1)      ------>ZmHOX2a(1)<---------bZIP60(2) <---------ARR14(2)   acagattttagaagcaaacgcaattcatgacactgcatcctctttgtagtgatgtgatgtgcgtgttagctgtgtgtgtccgcgtttatctttttttttt  20471600                                  <---------DAG2                                  <----------DOF2                                 <---------ANAC58                          --------->AtMYB61                                 <---------ANAC58                       --------->AtMYB61                             --------->ANAC55(2)                        <---------ALFIN1                             <---------ANAC55(1)                        --------->DEAR3(1)              >>>>>>>>>MYB98 <---------ANAC58                          --------->MYB46(3)            ------>ZmHOX2a(1)<---------ANAC55(2)              <---------ALFIN1    <----------DOF2          <---------ANAC58               --------->ANAC58   --------->TOE2(3)    <---------DAG2           <---------ANAC46               --------->ANAC58 ------>MYB83           < <-----------GT1           <-----------GT1                  <---------ALFIN1 ------>MYB46(1)  ------- ------------ANAC81    <---------YAB1           ----------->GT1      --------->ANAC46    <----------DOF2   ttgttacttttctcctaacttagttgttattacgtgcttttcccaatatcaagttaaatcacacacacttcccaccaccttccttcattttctttccgaa  20471700  Previous    Next  AGI:  At5g50250.1    Description:  31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putative. similar to RBP31 (31-KDA RNA BINDING PROTEIN), RNA binding / poly(U) binding [Arabidopsis thaliana] (TAIR:AT4G24770.1); similar to RNA-binding protein (GB:AAA33039.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 20469713    to: 20471239    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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