Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               ------>MYB83                             ------>MYB46(1)                           <---------MYB59                       <---------------AGL15         ------->TEIL      <---------MYB111(1)                  ----------------->AGL1     <-------MYC3          <---------MYB46(2)                   <-----------------AGL1  <---------ALFIN1        ----------------->AGL1              --------->WRKY38(1) ------->PCF2            ========================================================MADS_MADS ---------HVH21          <-----------------AGL1              --------->ATERF1(1) ----ANAC58--------->At4g35610                              <-------GAMYB ----ANAC55(2)           ------->TEIL                       <---------At4g35610                     - --->ANAC55(2)           <-----------------AG        <---------ANAC58                             --- ----ANAC55(1)       <---------------AtSPL8          <---------ANAC58        <---------ARR14(2) ----- ----ANAC58<---------At4g35610         ----------->GT1      --------->At4g35610                 <---- >GT1------->MYC3    --------------->AtSPL8          <---------ANAC46       <---------GLK1(1) -------   tgtcccacatgtatgctgatatttatgtacctaattggaaatggttaaaaacatttcttgggagttgcccaaacttgaaaatccctcatcttggtaatga  20447400                                                               <---------YAB1                                                      <---------GLK1(2)                                                     <---------HSFC1(2)           <---------STY1(2)                         --------->HSFC1(2) -------->At4g35610                                 <-----------ARR10     ---------->DOF2 --->ZmHOX2a(2)                                   ---------->DOF2      --------->AtLEC2 ---->ARR11(3)  <---------ANAC46         <---------MYB46(3)    --------->ICU4                 ------- -----ARR11(3)  <---------ZAT6        <-----------RAV1(1)    <---------At4g35610   --------->At4g35610 -->ICU4   --------->STY1(2)  <---------ZAT6<---------REM1(1)--------->YAB1       -------------------   tctgctaaactctagctagtgtgaatcaactagtgttcatgtgttgttgtagcaaagcttctctgatgatgaaatgcaaagaagaagctacagaactaaa  20447500                                                                     -------->P                                                                     ------>MYB83                                                                     ------>MYB46(1)                                    <---------ATHB12         --------->ANAC58                    <---                          <---------ZAT14        <----------DOF2   <---------MYB59              -----                        --------->REM1(2)       <---------ANAC58   <---------MYB111(1)    --------->AHL20(2)                       <---------ANAC46     <----------DOF2  --------->ANAC58             --------->YAB1 --->DOF2            <---------ANAC46  ------->TEIL        ---------->DOF2        <-----------GT1<--- ----->ANAC81 <---------YAB1     --------->ICU4 <---------ANAC58 -------->P <-------TEIL <<<<<<<<<ARR2   gaagaacaatggaagcattataggtgtgtatagtactaatgaatctctttgcttttgaccacaaagcaacctacttggttcatgttacacaatcaaattt  20447600                       -------->HAHB4                       <--------ATHB1                       --------->ATHB51                       <---------ICU4                       <--------HAHB4                       --------->YAB1                      <---------ATHB51                      --------->AHL20(2)                      <---------YAB1                      --------->ICU4                          <---------ANAC58                    --------->YAB1         --------------->AGL15       <-----------HVH21      --------->YAB1                  <---------ANAC58                   ---- ---MYB46(1)       <---------AHL20(2)      <---------------AGL15      <---------ICU4   --------->TOE2(3) ---->MYB59    --------->AHL20(2)   <---------ICU4       --------->ARR14(2)            --------->TOE1(3) ---MYB83      <---------AHL20(2) --------->AHL20(2)     <---------ICU4           --------->AHL20(2)   ggttccaaatgtcacatataaataataattaagcataaaaattccctatttatagccaatatttgcttctgaatattactcaaattaaacctaaaactca  20447700                                                                                                    -                                                                                                    <                                                             --------->YAB1                        <-                                                            <---------ATHB12                       <-                                                        ------------>CBF                     <-------                                                        <---------ATHB12                   <---------YAB1                         <---------ARR11(3)            ------>MYB46(1)                   <-----------GT1                       --------->ANAC58                ------>MYB83                     <---------YAB1                       --------->ANAC58               --------->WOX13(1)                <---------AHL20(2)                   --------->ANAC58                 ------------>CBF                    --------->AHL20(2)                   --------->ANAC58     ----------->HVH21 --------->WOX13(1)         <----------DOF2< ----->At4g35610 ---------->DOF2 <-----------GT1  <-----------GT1  <-----------GT1<-----------GT1----   gaagaatgttttgagaaacaaaagcaagaaattttgaaccatgtgatatgtttcaccaatcaatcatataaacttcttctggtttatctttttattatcc  20447800        --------->ANAC58        --------->ANAC58      <---------ALFIN1      --------->ZAT6   <-----------GT1 -------->YAB1 ---------ICU4                                                                                <------ --------ATHB12                                                                               ------- --------YAB1         *TSS                                                   <---------HSFB2a(2) ----GT1--------->ANAC46                                                     --------->HSFB2a(2) --------HAHB4     <---------CCA1(2)               --------->ANAC46         ----------------->AGL1 -->ZmHOX2a(1)   --------->YAB1                  <---------ALFIN1     <---------MYB52(1) ----------->GT1   tatcattaccactccatactcataactctctctgtctctctatctccctctccacatcaagaagaagtctctgctagttccaaaacagaacaagtgaatc  20447900                                                                           <---------ATHB12                                                                <-------TEIL                                                               <------ZmHOX2a(2)                                                              --------->AGP1   <-------TEIL        <---------YAB1                   <-----------RAV1(1)  --------->ARR14(2)     <---------ANAC58 ---ARR14(2)                      --------->ZAT18<---------ANAC46      <---------ZAT14       <------- -->ARR14(2)<-----------GT1  ---------->DOF2<---------MYB46(3)<---------ARR14(2)     <---------ANAC58   cctcaagtttcttattacaaaacccaaaaaccaaagtgaaccagtgttgttgtttgtactcacagatccattctccactgattcatttcttgctctgctt  20448000                                                                                                    <                                                                                                 <---                     --------->HSFB2a(1)                                                  <---------ANAC58                     --------->HSFC1(2)                                                   -----------                     <---------HSFB2a(1)                                                  <---------ANAC58                     <---------HSFC1(2)                                                   <---------AtLEC2                    <-----------ARR10                                                     ===========                    <---------ARR14(2)                                                    <---------ANAC46                    --------->ARR11(3)                                                <---------ANAC58                    --------->ARR14(2)                            <---------AHL20(2)  <---------ANAC58                    --------->GLK1(2)                             --------->AHL20(2)--------->ARR11(3)                    <---------ARR11(3)                <---------YAB1              ----------->ARR10--                   <---------GLK1(2)               <---------AHL20(2)         <---------ANAC46   ----     <---------MYB52(1)                           --------->AHL20(2)         <---------LBD16   <----- --At4g35610     <---------TOE2(3)          <-----------GT1<-------TEIL     --------->ALFIN1   <-----   cttctctcttagttttgttaagaatcttctcttatccattgtgttttttctattttataaatacatatataattttagttgggggagagcttgcctggtg  20448100                                                        <----------DOF2 ------NtERF2                                    --------->HSFC1(2) ---NtERF2                                     --------->ARR14(2) >RAV1(2)                                      --------->ARR11(3) ======RAV                                     <---------ARR14(2) ---->NtERF2                     <---------LBD16 <---------HSFC1(2)                          <------- ----->ATERF1(1)                --------->MYB52(1)      <---------DAG2                   --------->ANAC55(2) ----REM1(1)                    <-----------GT1<---------ARR11(3)                      <-----------GT1 ------RAV1(1)            <----------DOF2    ----------->ARR10                         <---------AHL20(2)   tcgccttcttctctctctaagacttgtgcttaatttacggacatgtgaagatacttcgcttttgcctcatcgaagggcatgttagctatttacttatctc  20448200                              <---------ARR11(3)                              --------->ARR11(3)                                                    -                              <---------ARR14(2)                                                   --                              --------->ARR14(2)                                                   <-                      <---------At4g35610           ---------->DOF2                               ---                      --------->At4g35610         --------->ANAC58               <----------DOF2 <---                    <---------ZAT18       <-------TEIL                   ============================               <---------ANAC58          --------->CCA1(2)               <------ZmHOX2a(1)      -----               <---------ANAC58   <---------YAB1  --------->ANAC58      <----------ID1          <---- --CCA1(2)<----------DOF2    <---------CCA1(2) <---------ATHB12      ---------->DOF2            -----   ttctcttctcttctttgtcttgtgagctctcaaatcttcatagatacaaatcaagaaagtgatcaaacaaaaaaaggacaagtctttttggtatttcaga  20448300  Previous    Next  AGI:  At5g50180.1    Description:  protein kinase, putative. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G40540.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06440.1); contains InterPro domain Tyrosine-protein kinase, ATN1-like (InterPro:IPR015784); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 20447822    to: 20450326    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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