Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <-------GAMYB                                                          <---------AtMYB61                                                          <---------YAB1                                            <---------AHL20(1)                                            <---------AHL20(2)     --------->ICU4                         --------->AHL20(1)                          >>>>>>>>>TBF1 ------->LBD16                              --------->AHL20(2)                       >>>>>>>>>TBF1 -->ZmHOX2a(2)                             --------->AHL20(2)                     >>>>>>>>>TBF1  ---- ----ARR14(2)                              <---------ATHB12<---------MYB46(3)  >>>>>>>>>TBF1--------- --->ARR14(2)                   --------->YAB1         ----------->HVH21    >>>>>>>>>TBF1   ---------   ccgagtaataagtctagttgaagagagagaagaagcataagcccaataaatttggatgtgatggttgaagtagttgaagaagaagaagaagaagaagcca  20423600                      <------MYB83                      <------MYB46(1)                     --------->MYB59                     --------->MYB46(2)                  --------->ATHB12                <----------DOF2               <---------ANAC58               <---------ANAC46               <---------ANAC58       <---------KAN4(2)                                                                ---------->DOF2       <---------------AtSPL3                                                  --------->ANAC46       <---------------AtSPL8                   ---------->ID1                 --------->ANAC58 ----->ICU4 <---------RAP2.6(2)       <------MYB46(1)         <---------ANAC58 --------->ANAC58 >ANAC58   ------->TEIL               ----------->GT1         <---------ANAC58--------->ZAT18 >ANAC58 <---------SPL7               <------MYB83         <----------DOF2    <---------ZAT18  >>>>>>   taactagagaatgtacggcttgtttggtaatgaaatggataggtttatttgtctccttgtgctttcttgatttttagtagcacacaagaacaaagaagaa  20423700                                                                     --------->ANAC58                                                                     --------->ANAC58                                                       <------ZmHOX2a(1)              --------->YAB1                ------------------------>ANAC81              <---------TOE2(3) >>>TBF1--------->YAB1                   <---------ALFIN1        ------------------------>ANAC81 <---   gaaggtggaatgagaatgagaagttagtttaatcccaatggccagactccagacagaggaaaacagagagcaagcaaacaaaaaaactactaatgttatt  20423800                                                                                                   --                                                                                                -----                                                                                               ------                                                                                            ---------                                                                                           --------->AHL20(2)                      <---------YAB1                                                    --------->AHL20(2)                 ------>ZmHOX2a(1)  <---------ANAC46                                   --------->AHL20(2)         --------->AHL20(2)         <---------ANAC58        <---------DAG2             <---------AHL20(2)         <---------AHL20(2)         <---------ANAC58        <----------DOF2        --------->AHL20(2) --------GT1 <-----------GT1     --------->GLK1(1)       <-----------GT1  <----------DOF2  <---------AHL20(2)   ttcagtttgattttatttcctcttatttttagggggtttcttggggtttgtagaattttaaactttatctctcaagcttttgttttaaaataaataaata  20423900                                                                            <---------YAB1                                        <---------ARR14(2)           --------->ANAC58       ---------->DOF2     <----------DOF2                           --------->ANAC58 -------->DOF2            <---------ANAC58                <----------DOF2 <-----------GT1 ---->AHL20(2)            <---------ANAC46 <---------ETT(1)      --------->ANAC58  ---------->DOF2 --->AHL20(2)             <---------ANAC58 --------->ANAC46 ----------->HVH21  --------->AtLEC2 >AHL20(2)  --------->CCA1(2)    <-------GAMYB           *TSS    --------->ANAC58--------->YAB1   aaaaagagagaaagagatgaagtaagtggctttggggttgtgtttccgacatagtctaagctttgacaggcacgaattaccattcaaaagagagtgctta  20424000                                                                                                   --                                                                                                   --               <----------DOF2 ------->MYC3                                                        <-              <---------DAG2   <-------MYC3 --------->ARR14(2)                                    <--        <----------DOF2      <---------TOE1(2)                            <---------ZAT14         ---       <---------DAG2        <---------TOE2(2)                            <---------ZAT18     -------     <---------PCF2   <----------DOF2    --------->ANAC46                 --------->ZAT14   ---------    ----------->TCP11(1)    <---------ALFIN1<---------ARR14(2)        <-----------GT1  <---------YAB1  --------->ALFIN1   <---------DAG2  <-----------GT1        <-----------GT1          ----------->GT1   gaaggtgggccttttgccttttgccttttcccacgttttttacccataacctcatgtccatttaaccattttttacttcactcttgatggtgataagtta  20424100          --------->At4g35610        --------->YAB1     --------->YAB1    <---------YAB1  -------->HAHB4  --------->ATHB12  --------->YAB1  <---------ICU4 --------->ICU4 <---------YAB1                 ----------->HVH21 ------->YAB1               <------ZmHOX2a(1) ------>HAHB4           <---------bZIP60(2)       --------->ZAT14 --------ICU4           <---------ANAC46          <---------ZAT14                <----------DOF2 -------ATHB51       ----------->HVH21           <---------------AGL15<-------TEIL ------>ICU4       <---------ICU4             --------->ZAT6      <---------TOE1(3) -->AHL20(2)       --------->YAB1             <-----------GT1     <---------------AtSPL8        ----- -->GT1<---------YAB1----------->TGA1       <-----------GT1       <---------TOE2(3) --------->YAB1   ataatgattatcatcttacaaacatgacgaggatgggacatggatttatcactatactaagaaagattaaggttcaaaactctctttcatcatcttattc  20424200                 ---------->DOF2               --------->ANAC58               --------->ANAC46      --------->ANAC55(2)                                                                   ---------      --------->ANAC58                                                                      <--------      --------->ANAC58                                                       <---------YAB1--------->ICU4      <---------ANAC55(2)                                                  --------->YAB1  <---------YAB1      --------->ANAC46                                         <---------ANAC46          --------->YAB1   --------->ARR14(2)                    ---------->DOF2       <---------ANAC58        <-----------TGA1   <---------ARR14(2)               ----------->GT1            <---------ANAC58     --------->ARR14(2) ---->YAB1     --------->ANAC58   ---------->DOF2 <------ZmHOX2a(1)   <---------ATHB12--------->YAB1   atgagtttacgcaatacaagaaagatgaataagctagaaagtagaaagtgaaggaccatagtatgtcgtccaatgaattgtaatagtatcgtcataattt  20424300                                                                         ------>ZmHOX2a(1)                   ----------->GT1                                      --------->TOE2(3)                <-------TEIL                                          <------ZmHOX2a(2)               --------->CCA1(2)         ---------->DOF2             <---------ARR14(2) >ATHB51    --------->MYB59    ----------->GT1   ---------->DOF2     --------->ARR14(2)         ----- -ICU4  --------->MYB111(1)  ---------->DOF2 ---------->DOF2 --------->ZAT14                    <----   gggtttatagtagttagatacatgttaaatagaaagaaaaaaaaaaagaaagaaaggaatcactgtattccgatccttatcaattggtttagaattggaa  20424400                                                                           <-----------GT1                                                                      <---------ICU4<---------AHL20(2)           --------------->AGL15                                      <---------AHL20(2)  <---------AHL20(2)           <---------------AGL15                                  <---------AHL20(2)--------->AHL20(2)          <---------ANAC55(2)        ----------->GT1         ---------->DOF2      <---------YAB1    --------->AHL20(2)            ---------->DOF2       ----------->GT1  <-----------GT1  --------->AHL20(2) ----------->GT1               <-----------HVH21      ---------->DOF2 --------->AHL20(2)  <---------YAB1 ---->GLK1(1)             <----------DOF2       <---------ZAT6--------->DAG2  <----------DOF2 <------ -----GLK1(1)          <---------ARR11(3)       ----------->GT1----------->GT1<---------DAG2 <-------   atcaagttaaatacttaaatcagtagttctttatgtcaaaggaaaaaatagtgtaagaaagtaaaaagttaattttttcactttatttttatattattat  20424500  Previous    Next  AGI:  At5g50150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10750.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96386.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 20419483    to: 20423957    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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