Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               =========================bZIP_DOF             <---------ANAC58             <---------ANAC58             --------->TGA1a                --------->GLK1(2)                   <------ZmHOX2a(2)             <---------TGA1a               <---------ARR14(2)                  --------->ARR14(2)             <---------O2  <----------DOF2 --------->ARR14(2)          ---------->DOF2             --             --------->O2  --------------------->WRI1      <----------DOF2     <---------ARR14(2) <-- >ZAT2   <---------HSFB2a(2)               <---------GLK1(2)       --------->ARR11(3)          ------ -ZAT2   --------->HSFB2a(2)      --------->ICU4  --------->YAB1   <---------ARR11(3)          ------   aagacacagttccagacgtgccaagaggcctttgtaagtattggagattctctcatgagcgcttttgaagaactcaagcgcgatccacatatcgcaacct  20382500                  ------>MYB83                  ------>MYB46(1)                 --------->ORA47(1)                <---------MYB59                --------->MYB46(3)          <---------------AtSPL3         <---------ANAC58         <---------ANAC46                      ----------->GT1    <---------ANAC46         <---------ANAC58   ------->GAMYB     --------->ETT(1)    <---------ANAC58      <---------YAB1--------->AtMYB61        <---------------------WRI1 ------->YAB1   <---------MYB46(2)         <------MYB46(1)        <---------ANAC58 -------ATHB12  --------->DEAR3(1)         <------MYB83      --------->ALFIN1          ----------->HVH21 --->TOE1(2)    <---------MYB111(1)       --------->MYB59    <---------O2     <---------YAB1 -------- --->TOE2(2)   --------->DEAR3(2)      --------->GLK1(2)     <-----------RAV1(1)     <---------At4g35610   atgatgttatgacttgtaccgaccatacaacccaagtgaagaatttggtcggaaaaaacacagatgtggcttcgaagactctcatagagatgacaatgca  20382600                                               <------NtERF2                                               <-------GAMYB                                               ----------->GT1                                              --------->MYB55(2)                                              <---------MYB46(3)                                             <---------ANAC58                                  <-----                                             <---------ANAC46                               ---------                                             <---------ANAC58                               <--------                                            <---------LBD16                           --------->TOE2(3)                                      <---------ARR11(3)                              --------->YAB1                                      --------->ARR11(3)                           <---------CCA1(2)                                --------->ANAC46         ---------->DOF2         <---------ANAC58               ------>ZmHOX2a(1)--------->ANAC58       --------->ANAC58          <---------ANAC58   < ->AtLEC2 --------->KAN4(2)     --------->ANAC58       --------->ANAC58   --------->YAB1    <--------   aatggagaagctcattcctcttgctcttgcatccacacaagttcttggcgggtgaaaacgaaagtgataacatatatcatcgtgcttatcttaatatatg  20382700                                                            <---------ANAC46    --------------->AtSPL8                               <---------WOX13(1)    <---------------AtSPL8                             <---------ICU4 ---------->DOF2                                       --------->ATHB12 ----YAB1                --------->TOE2(3)            --------->ICU4 >AHL20(1)               --------->YAB1            ------------>ATHB5 -AHL20(2)              <<<<<<<<<ARR2     <---------ANAC55(2)      <----------DOF2              <---- ---------AHL20(2)      <<<<<<<<<ARR1     --------->ANAC55(2)--------------->AtSPL8          <------- -AHL20(1)    --------->YAB1             <-------TEIL <---------YAB1             <---------RAP2.6(2)-   atttaaagagtaccatttataaaacaatcttaattttaagagttacatactaggccatgattgtttgtactttcgaaaatggttcggcttaaaaactttt  20382800                                                                                              <------                                                                                             --------                                                                                          ------>ZmHOX2a(1)                                                                                        ----------->RAV1(2)                                                                                      ------>ZmHOX2a(2)                                                                                     <---------GLK1(1)                                                                                     --------->GLK1(1)                                                                                     <------ZmHOX2a(2)                                                                                    <---------ARR14(3)                                                                                    --------->ARR14(3)                                                                                    --------->ARR11(3)                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                    <---------ARR11(3)                                               <---------MYB52(1)                 ----------->ARR10                                    --------->ARR11(3)                          ---------->DOF2                                    <---------ARR11(3)                         ==============HOX2a_HOX2a -------RAV1(1)                     <---------AHL20(1)                         =============HOX2a_HOX2a ---DOF2 <----------DOF2            --------->AHL20(1)                         <------ZmHOX2a(1)  <-- ----->NtERF2       <---------AHL20(2)   --------->ETT(2)                 <---------STY1(2)  <-------   ggggccttaggcttttggatgttttaatgaggctcaaatattttcgaccgtgagtttatttgggcccaaatgaactatctaggaaagatctcctgtggtt  20382900   --------->AHL20(2)   <---------AHL20(2)  --------->AHL20(2)  <---------AHL20(1)  <---------AHL20(2)  --------->AHL20(1)                              <----------DOF2 --------->AHL20(2)                               <---------DAG2           --------->ANAC58 -GAMYB                                    ----------->HVH21               --------->ANAC58 --->GT1        <---------ARR11(3)       <---------ANAC58         <-----------GT1 -------YAB1    --------->ARR11(3)       <---------ANAC58       <---------AHL20(2)---------->DOF2 --MYB46(3)   ------->TEIL     <----------DOF2  *TSS   <-----------GT1  --------->WRKY18(1)         -   aaaattaatttagatgtatatattcggacatagcttttggtttgtgtgacaactttatttccatatataaactagtcaagcctctaaagagagaccacat  20383000                                                  --------->TOE1(2)                                                  --------->TOE2(2)              --------->ATHB12              <------NtERF2                          ----------->RAV1(2)   --------->DAG2                         --------->ALFIN1                        ------->TEIL  ---------->DOF2                 <---------At4g35610                          <---------ATHB12 -------->LBD16     <---------ZAT6--------->At4g35610                <---------ZAT14              <--   tccgaaaagtacttgtttattggtgttattcatcgctgctcaaggtggcaaaccaaggagaacaagaagagtccagggccaatgagcctgagggtatcaa  20383100                                                  <-------TEIL                                               <------MYB46(1)                                               <------MYB83                                           --------->ATHB12                                         <--------P                                         <---------WOX13(1)                                        <-     <---------WOX13(1)                 <-------GAMYB            --------->ANAC58                <---   --------->ATHB12                    <---------MYB46(3)        --------->ANAC58           --------- -------ATHB12                        <---------AtMYB61         <---------LBD16         ------>NtERF2   atcagtgattgatgacatctacatttttgaagacgaccctgtggttgataggttcaataggtttggcacggagatgtctgccatggtctcggccttgaca  20383200         <---------At4g35610  <---------MYB46(3)                  --------->ZAT18            --------->ZAT18              ------- --------ZAT2                         <---------ZAT18            <---------ZAT18    <---------At4g35610 --------RAV1(2)         <---------TOE2(3)          <---------TOE2(3)         ------>ZmHOX2a(1)     < -->HVH21--------->At4g35610        --------->At4g35610        --------->At4g35610  --------->At4g35610   caggtggtttctgctcgctctcagactgaggctgaaggtgctcactctcagactgaggctgaaggtgctcactcttcttcctcttcggctggacataaaa  20383300                <---------ARR14(2)                                    <---------MYB46(3)           --                --------->ARR14(2)                                    ------>ZmHOX2a(2)           ---                --------->GLK1(2)              --------->REM1(2)     <------ZmHOX2a(2)       <-------     <---------ANAC46               <---------ICU4                  <---------ARR14(2)       <-------     <---------ANAC58               --------->ATHB12                --------->ARR14(2)       <-------     <---------ANAC58    ------>ZmHOX2a(1)<---------ANAC58          <---------MYB52(1)       <------- --->DOF2      <---------GLK1(2)   <---------YAB1          --------->ANAC46           <-----------GT1 ------ZmHOX2a(1)   <---------At4g35610   <---------ANAC58 --------->ANAC55(2)    <---------ARR11(3)   gaggatggcttggaatcgattctgctcctattccctcatcatttgctcgtgtagactcttcacataatccgatcggtgagtctagatgttacatttcgtg  20383400  Previous    Next  AGI:  At5g50070.1    Description:  invertase/pectin methylesterase inhibitor family protein. similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT1G54980.1); similar to pollen-specific protein Bnm1 [Brassica napus] (GB:AAB48480.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 20381782    to: 20382655    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g50080.1    Description:  DNA binding / transcription factor. Identical to Ethylene-responsive transcription factor ERF110 (ERF110) [Arabidopsis Thaliana] (GB:Q70II3;GB:Q9FGA3); similar to AP2 domain-containing transcription factor family protein [Arabidopsis thaliana] (TAIR:AT2G33710.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66025.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 20382948    to: 20384061    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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