Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->At5g28300                                       <---------MYB52(1)                                     <---------ATERF1(2)                                     --------->ATERF1(2)                                   ------>NtERF2                                  --------->RAP2.3(3)                                  --------->RAP2.3(2)                                  --------->ATERF1(2)                                  --------->DEAR3(1)                                  <---------ATERF1(2)                                 --------->RAP2.6(1)                                 <------NtERF2                                 --------->ATERF1(1)                                 --------->DEAR4(2)                                 --------->DEAR3(2)                                 --------->ERF1                                 --------->ORA47(2)                                 <---------RAP2.6(2)                                 --------->RAP2.3(1)                  ------->GAMYB                                <---------ATERF1(1)                  --------->ANAC58                                ------>NtERF2                        --------->ANAC58                               <---------PCF2                      --------->MYB52(1)                            --------->ALFIN1                       <---------DOF5.7(2)                           --------->LBD16                       <---------MYB52(2)                          <---------ANAC46                      --------->At4g35610                          <---------ANAC58                      <---------At4g35610                     <----------DOF2<------NtERF2         <---------ANAC46        <----------DOF2  <---------LBD16                <----------DOF2        <---------MYB52(1)<---------ANAC58             <---------ANAC58                       <------    ------>ZmHOX2a(1)------>ZmHOX2a(1)--------->LBD16  <---------ANAC58                   --------->ZAT14   gttctcctccctttggtataatccttttccgtggtgccgccggtaattgagcattttgcttcttggagctaacgcccttgagcatatatcacagtagtct  20381400                                                                   --------->AHL20(2)                       ---------->DOF2                            --------->AHL20(2)               --------->AHL20(2)                             --------->AHL20(1)               --------->YAB1                                 --------->AHL20(2)          <---------MYB52(1)                                  <---------AHL20(2)                -----    <----------DOF2--------->GLK1(2)                 >>>>>>>>>>WRKY38                           <----    <---------DAG2 --------->ARR11(3) ----------->GT1>>>>>>>>>>WRKY26                           ----- <-----------GT1   <---------ARR11(3)--------->DAG2  >>>>>>>>>>WRKY43               <------------CBF ---ZAT6 --------->TOE2(3)          ---------->DOF2  <---------WRKY18(1)      <---------WRKY38(1)   tataaacttttcgttaataaaaatctaaagagttaccaaaaagtaaaaaaaaacttgaccaaaataaaataaaaaactagtcaacaaattgtatagactg  20381500                                                                                               <-----                                                                                              -------                                                                                       --------->AHL20(2)                                                                                       <---------ICU4                                                           --------->At4g35610         <---------AHL20(2)                           --------->TOE2(3)          <---------GLK1(1)               --------->ICU4                        --------->KAN4(2)    --------->GLK1(1)                        <---------YAB1                       <---------KAN4(1)     <---------GLK1(1)                     --------->AHL20(2)                       --------->KAN4(1)    <---------GLK1(2)                      <---------AHL20(2)                      <---------KAN4(2)     --------->ARR14(2)                     <---------YAB1     ----------->GT1 --------->YAB1    <-----------HVH21   <---------At4g35610    --------->AHL20(1)< ---->ZAT18      ---------->DOF2--------->MYB46(3) <---------TOE1(2)       ---------->DOF2<---------- -----ZAT14     <------ZmHOX2a(1)------->GAMYB     <---------TOE2(2)--------->YAB1--------->AHL20(2)- ---->ZAT14   <---------TOE2(3) <---------MYB52(2)------>ZmHOX2a(1)<---------YAB1 <---------AHL20(1)<   tactaagatgaaaaataaggaaagaataatctcaacaaaccagtcagatttcctagatttcagcacataatgaaaatgaaagaatataattaataccagt  20381600                                --------->AHL20(2)                                                  - ------HVH21                ----------->GT1                                                   ------- -->ANAC46                  <---------YAB1           --------->DAG2            ----------->GT1------- ---------ARR14(2)        ----------->GT1        --------->ANAC58            <---------ANAC46-------- -GT1           <-----------GT1 <---------AHL20(2)  ---------->DOF2       <---------YAB1     <------- -------->ARR14(2)  ---------->DOF2              --------->ANAC58       <---------ICU4     --------->YAB1 ---------GLK1(2)  <---------------AGL15         --------->ANAC46      --------->ICU4 ------------>CBF   cagatttgtttttgttttttactaaagatggtgataaatttcatgacttccaagaaaagttcccttgcacataaatatgactggtataaacaataaccac  20381700             --------->ARR14(2)        --------->ANAC58      ---------->DOF2 --------->TOE2(3) --------->DAG2 -------->YAB1    ---------->DOF2 >GAMYB --------->ANAC58           <-----------GT1 -->TOE2(3)  <---------ARR14(2)   <---------AHL20(2) ->MYB46(3) --------->GLK1(1) ------>ZmHOX2a(1)                                             <-------- ---ID1--------->DAG2       --------->YAB1                             --------->ANAC46<<<<<<<<<TBF1   aaacatcaaaaagcaaatccaaaagttgaatcctaatttaacttataggttgagagaaacaaaacgttctcccacgaagaaatgacttcttcttctcatt  20381800                                                                                                    <                                                                                      <---------AHL20(1)                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                             --------->TOE1(3)     --------->YAB1----                                                             --------->TOE2(3)  --------->TOE2(3)<--- <---------ANAC58                                    ------>NtERF2            <-------TEIL     <----- <---------ANAC58                           ----------->RAV1(2)   --------->MYB46(3)  --------->AHL20(1) -YAB1 ------>ZmHOX2a(2)         <---------ARR11(3)<---------RAP2.6(2)  --------->ANAC46  <---------ICU4   gtttcttgatcgtttcagtggcacttctattgcaagttctcttatcccctgtttcggccttaaccttaacctccacaaaatacattaataaattatgcca  20381900                                                             <---------At4g35610                                                             --------->At4g35610             <-------                                                       <---------LBD16           --------->ARR11(3)                                                      ------>ZmHOX2a(1)    <------MYB83------->TEIL         --------->ETT(2)                           ----------->RAV1(2)    ----------->GT1   --------         <---------ETT(2)                          ------>ZmHOX2a(1)       <------MYB46(1)   <------- -----------HVH21                              <---------ARR14(2)       <---------ANAC58     -------- ----->At4g35610                               --------->ARR14(2)       <---------ANAC58     <------- ------At4g35610                        <---------ANAC58 <---------RAP2.3(1)     <---------ARR11(3)-- ------RAV1(2)   <-----------GT1        <---------ANAC58 ------>NtERF2  <---------ANAC46    <--------   gatgtcatttgtcgacaataaacccttctgtttgcaaacattgagtgcctatcctcctgcggcttctgccactggcttggtaatatctgaacccatatct  20382000                                                              <-----------HVH21                                                           <---------ANAC58  --------->YAB1                                           <---------ANAC46 <---------ATHB12                    <---------AHL20(2)    <---------ANAC55(2) --ARR11(1)                         --------->AHL20(2)     <---------ANAC55(1) ->ARR11(3)                         <---------AHL20(2)     <---------ANAC58 --ARR11(3)                     <---------AHL20(2)     --------->DOF5.7(2) ->ARR14(2)                    --------->AHL20(2)     --------->TOE2(3) --ARR14(2)                    <---------AHL20(2)   <---------TOE1(2)                         <------ ------->WOX13(1)          <---------AHL20(2)    --------->MYB46(3)                         <-------- -CCA1(2)                <---------CCA1(2) <----------DOF2 --------->ANAC55(2)             --------->ICU4   ccaatcaaactagtttttgatatttgcatatattttaattttatacttttatccaacgtttacgtgtcaattgaattttcgaaaatatgtttcattatca  20382100                              <---------ATHB12                              --------->ICU4       <---------AHL20(2)                           <---------AHL20(2)     --------->AHL20(2)                  <---------AHL20(2)    <---------YAB1                 --------->AHL20(1)             --------->AHL20(2)     <---------GLK1(2)   ----------->GT1<---------AHL20(2) ---YAB1     <---------AHL20(1)--------->YAB1     <---------AHL20(2)   --------->AHL20(2) -ICU4       <---------AHL20(2)<---------ICU4     <---------AHL20(1)  --------->AHL20(2)  ---------->DOF2   tctacgttttcttattttattttttttgtttaatcatggattatcagtctaataaaatttgaaaaaaaaaaaaaaaattgaatgtatggtttgaaagaaa  20382200                                                                                  --------->AHL20(2)                                                                                 <---------AHL20(2)--       <---------DAG2                                    --------->TOE2(3)   <---------YAB1      <---       <----------DOF2                          <---------YAB1         ==============================    <---------ALFIN1        --------->YAB1    <---------ICU4           <----------DOF2           ----   --------->MYB46(3)  --------->AHL20(2) <---------AHL20(2)        <---------ARR11(3)<----------ID1   ttagaaccacttttcaaaacataaaaaaaatcatatatatgtttttatttatgactcattcttaaaacaatttctttttataaataatatgacaaatata  20382300  Previous    Next  AGI:  At5g50070.1    Description:  invertase/pectin methylesterase inhibitor family protein. similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT1G54980.1); similar to pollen-specific protein Bnm1 [Brassica napus] (GB:AAB48480.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 20381782    to: 20382655    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version