Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------AHL20(2)           --------->YAB1           --------->AHL20(2)        ------>MYB83                                                                           ------        ------>MYB46(1)                                                                      --------      <---------MYB59                                                                        ------>ZmHOX2a(1)     --------->ANAC55(2)                                                                     --------     --------->ANAC46                                    --------->ATHB12       --------->MYB52(1)   <-----------GT1                                 --------->ANAC46             <---------ARR14(2) -------->YAB1                                    <-------TEIL                  --------->ARR14(2)  < --->AHL20(2)          --------->ICU4      --------->AHL20(2)      <---------ZAT14 ------->GAMYB   <-   aatattcacctaataaaaatgagtaatgagtaattgaattcagaataaaacatacacaatgagtgagagagaactgagtccataaccgagttatcctctg  20344700                                                             <---------ANAC58                                                             <---------ANAC55(2)                                                             <---------ANAC58                     <---------ALFIN1                   ----------->GT1                   --------->LBD16                      <------MYB46(1)                  <-------PIF5                          <---------MYB46(3)                  --------->DEAR3(1)                    <------MYB83                  <---------ATERF1(2)                <------NtERF2                  --------->DREB2C(2)           --------->DEAR3(1)                  --------->ATERF1(2)          <---------HSFC1(2)                  ------->PIF5                 <------------AtMYB77                        <---------GLK1(1)                 --------->At4g35610           --------->HSFB2a(1)                        <---------ARR14(2)                 --------->DEAR3(2)            --------->DEAR3(2)                         <---------ARR11(3)                 <------NtERF2                 --------->HSFC1(2)                         --------->ARR14(2)                ------>NtERF2                  --------->MYB46(3)                         <----------      <---------WOX13(1)                       <---------HSFB2a(1)               <---------ZAT2  --------->LBD16--------->ATERF1(1)         <---------ARR14(2)                  --------->At4g35610 <---------LBD16<---------ATERF1(1)          --------->ARR14(2)     <---------ICU4        --------->ARR11(3) ----->HVH21--------->ANAC58           --------->ARR14(2)    <---------ANAC46    <---------At4g35610 --->RAV1(2)--------->ANAC46           <---------ARR14(2)   --------->MYB52(2)   --------->ZAT2 ->At4g35610--------->ANAC58       <---------LBD16  --------->HSFB2a(2)    <-----------HVH21    <---- ---------LBD16<---------ALFIN1   ------>ZmHOX2a(1) <---------HSFB2a(2)   --------->DEAR3(1)   ------ --------LBD16<------NtERF2       <---------LBD16<-----------HVH21  --------->YAB1 ----------->HVH21<   actcggggattgactcggcaccggcactggtttttcctcgggattcggaaccgtcgggaggttacttgaatcatcaccgtcgtagctgacagtatctccg  20344800                                                                   <---------AGP1                                                                   --------->ARR11(3)                                                                   <---------ARR14(2)                                                         <---------DOF5.7(2)         ---------->DOF2                           <-------GAMYB   <---------ARR11(3)    <---------ARR14(2)                            --------->MYB111(2)    --------->ARR14(2)                            --------->MYB55(2)   <---------CCA1(2)              <---------ARR14(2)  <------MYB83 --------->ARR14(2) --------->YAB1                   ------->TEIL    <---------MYB46(3)                       --------->HSFB2a(2) -ARR10----------->HVH21          --------->ARR14(2)  <------MYB46(1)                      <---------HSFB2a(2) -------TGA1             <------ZmHOX2a(1)        --------->MYB52(2) ------>ZmHOX2a(2)<-------TEIL --->ANAC46  --------->ALFIN1----------->GT1   ------------>MYB.PH3(2)               <---------ARR14(2) ---------YAB1        <-----------RAV1(2) --------->CCA1(2)       <---------CCA1(2)  --------->ARR14(2)   tcatcatatctgaaagtgggaatcacaggagaggtgaatcttcgatatgagtttgttggtaacgttttggatctttggaacagagaggttcttctagggg  20344900                                                       <---------WOX13(1)                                                     <--------ATHB1                       <---------ZAT6                                                     --------->ATHB12                ------>ZmHOX2a(2)                                                     -------->ATHB1                 <------ZmHOX2a(2)                                                     <---------ICU4                 --------->CCA1(2)                                                    <---------ATHB12               <---------ARR11(3)                                                    --------->ICU4                 --------->ARR11(3)                                                    <---------YAB1                 --------->ARR14(2)                                                 ------------>ATHB5                --------->AGP1                                            ----------->GT1                        <---------AGP1         <------NtERF2                  --------->GLK1(1)                          <---------ARR14(2)  --------->ARR14(2)  ----------->GT1   <---------GLK1(1)    >>>>>>>>>SARD1       <---------GLK1(1) -  ------->TEIL<--------P--------->AHL20(2)<------ZmHOX2a(2)  >>>>>>>>>CBP60g      --------->GLK1(1) <   tatgaatcggcatcgggttgaagtaagtaaattgagaaacagagatcagttacaatgattgaaatttggaacatggaagaagagagatctgagagttaga  20345000               --------->ZAT18               <---------ZAT18               --------->ZAT14               <---------ZAT14              >>>>>>>>>>>>>>>>>LFY                                              --------->AHL20(2)          <---------MYB52(1)                                                  ----------->GT1         <-----------TGA1                                                    --------->DAG2         <-----------HVH21               <----------DOF2                    ---------->DOF2       <-- <---------At4g35610         <---------At4g35610      *TSS             ============================== -------->ARR11(3)           --------->At4g35610<-----------GT1        ----------------->AGL1     <-- ---------ARR11(3)   <---------MYB52(1)  <---------DAG2                ----------------->AG  --------   gagagcttcttcgtcagtccactgtttgtttagctctctgtctctttttgttacagtttttgaataaacaaatgccaaaaaagtaaatggagggagaaag  20345100                      <---------ARR11(3)        <---------MYB59        <---------------AGL15        ------------>CBF                      <---------YAB1       --------->ANAC58                      <---------AHL20(1)       <-----------------AG                  --------->AHL20(1)       --------->ANAC58                      <---------AHL20(2)   --------->TOE2(3)                 -       <-----------------AGL1               --------->YAB1       <---------ANAC55(2)               <<       ----------------->AGL2               --------->AHL20(2)   --------->ANAC58                  <<       ----------------->AGL3              <---------YAB1        --------->ANAC55(2)               <<       ----------------->AGL1           <---------AHL20(2)       --------->ANAC58         --------->AHL20(2) -------DAG2          --------->ARR11(3)--------->AHL20(1)       ----------->GT1 <-----------GT1   << ========================MADS_MADS      --------->AHL20(2)       --------->ANAC55(1)    --------->AHL20(2) --------DOF2         --------->GLK1(2) <---------AHL20(1)      <-------TEIL  --------->ICU4  <------ -->DOF2--------------->AGL15      --------->YAB1 <---------AHL20(2)     ----------->GT1<---------AHL20(2)   ctttttgatacccaatttagaaagtatctttcttctatcaaatttattatatttcatttgaaatgatacgtaaattagtaatttttctatttttatatac  20345200      <---------AHL20(2)     --------->AHL20(2)     --------->YAB1                                                      ------->TEIL  ------>ZmHOX2a(1)                                              ----------->RAV1(1) -------->YAB1                                                 ------>NtERF2                   <----- <<<<<<<ARR1                                                  --------->ANAC46   --------->ANAC58 <<<<<<<ARR1                                                <---------At5g28300  --------->ANAC58 <<<<<<<ARR2                              <-----------GT1  <-----------GT1       --------->ANAC46 <<<<<<<ARR2                 <---------ANAC46         <---------ICU4  <---------YAB1        --------- -----GT1     --------->TOE2(3)  ----------->GT1     <---------ATHB12 <---------ATHB12   <----------DOF2   aatcctattatataaaacttaacaaaacatggtttgtgtaaaatttacattgcaaatcattttaccgccacaatgaatgtcccaagcgagcctttaataa  20345300                      <------NtERF2                                            ---------->DOF2                     --------->LBD16                                         --------->YAB1  <---------TOE2(2) --------->ETT(1)                 <-------TEIL     ----------->GT1               -  <---------TOE1(2)<---------LBD16              --------->AHL20(2)    <---------ANAC46             -- ----ICU4  --------->GLK1(2)                ----------->GT1         --------->ZAT14                <- >YAB1 --------->AHL20(2)               <------ZmHOX2a(1)           <---------ZAT14           <------   gtcccatgttaaaattctattgccggagcaaaaatgttaagaggaagagtttatatacatagagagagtgtgaagtgaatcaaaagctggtcttgttcat  20345400            <---------AHL20(2)                                              --------->YAB1       --------->GLK1(2)                                     --------->TOE2(2) -------->CCA1(2)                                            --------->TOE1(2)         --------->LBD16 ------->ARR14(2)                 --------->MYB46(3)         --------->DEAR3(1)       --------->LBD16 --------ARR14(2)       --------->WRKY38(1)                 --------->MYB46(3)    --------->ARR14(2) ---AtLEC2<----------DOF2      <---------ETT(2)             --------->DEAR3(2)    <---------ARR14(2)   ggatatgaaattcttttatttatgcgatgactgtcaacaacttcagaaattagtttgctaaaaccgacgataactatatcatggtatcccgagtcaaaaa  20345500                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                <----                          <---------ZAT18                                                <---------ZAT14                         <---------ANAC46                                                --------->ZAT14                    --------->YAB1    <---------At5g28300                            --------->ZAT6                   <---------YAB1 <---------ZAT6                              --------->ICU4    <----              <---------YAB1 <---------AtLEC2 --------->AGP1<-------TEIL    --------->YAB1     <-----   ttcaaacgatgcgattttgatatgatagtgtgcatggtgttactgccaggtctacttatatatacatattcaagatgagcataatgaagactacagtttc  20345600  Previous    Next  AGI:  At5g49960.1    Description:  binding / catalytic. Identical to Putative ion channel DMI1 [Arabidopsis Thaliana] (GB:Q9LTX4); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G02940.1); similar to SYM8 [Pisum sativum] (GB:ABX57723.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46974.1); similar to DMI1 protein homologue [Pisum sativum] (GB:CAJ00334.2); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Protein of unknown function DUF1012 (InterPro:IPR010420) Range:  from: 20341190    to: 20345054    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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