Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->ANAC58                                            --------->ANAC58                                     ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)                                               <                                    --------->CCA1(2)                                               -                                   --------->ARR11(3)                                              <-                                   <---------AGP1                                                  <-                                   <---------ARR14(3)                            <------ZmHOX2a(1) --                                   --------->ARR14(3)                      <----------DOF2         --                             --------->HSFB2a(2)                        --------------->AGL15      <-                 --------->MYB52(1)<-----------ARR10                    <---------------AGL15      --              <---------ANAC55(2)  --------->GLK1(2)--------->ARR11(3)  =============================      <---------ANAC55(2)    <---------HSFB2a(2)---------->DOF2       <---------At5g28300          -- ------>GT1   --------->ANAC55(1)  <---------ARR11(3)                <-----------GT1---------->DOF2<- --->ARR11(3) --------->ANAC46     <---------ARR14(2)        --------------------->WRI1    <------ZmHOX2a(1) ----ARR11(3) --------->ANAC55(2)  --------->ARR14(2)   ----------->GT1 =============================   gttatatcacatgaacacataacagttgtgcctagaagatctgagcaagtaaaagatgtggttttttgaaattaccgcttataggagaaaggaggagact  20340400                 <---------At4g35610              ---------->DOF2             <------ZmHOX2a(1)           --------->ANAC58           --------->ANAC58         <--------P    --------->DAG2   ---------->DOF2 ---------------AGL15 -------------->AGL15                                                       <-----------ARR10 ----------------AG                                                         --------->ARR11(3) ----------------AGL1                                       --------->ARR14(2)           ---------->DOF2 --------------->AGL3                             --------->TOE1(2)         <---------ARR11(1) --------------->AGL1                             --------->TOE2(2)         --------->GLK1(2) ----------------AGL2                    --------->ANAC58   --------->GLK1(2)  <----------DOF2 --------------->AGL2                    --------->ANAC58   <---------ARR14(2)<---------ICU4 -------- ================MADS_MADS             ---------->DOF2     --------->RVE1(1)<---------ARR11(3) --------------->AG                 <----------DOF2    ---------->DOF2      <---------ARR14(2) ------ ----------------AGL3              <---------ANAC58   <------ZmHOX2a(1)     --------->ARR14(2)<------ZmHOX2a(2) ===============MADS_MADS          <---------ANAC58 <---------TOE2(2)      <---------CCA1(2) <-------   ttccaaaaagggtaaggaaagctgtttgaagatgagggcttgaaagccagaacgtaggaaagtatctgcaaaattgcaaatctttacataagaaagatcg  20340500          <---------WOX13(1)       <---------YAB1                                 --------->ANAC46   <---------TOE2(3)                                  --------->ANAC58  <-----------GT1                                     --------->ANAC58 ->ARR11(3)                                       <------ZmHOX2a(1) >ZmHOX2a(2)                            --------->ORA47(1)                    <---------HSFB2a(2)   < --ARR11(3)   <------ZmHOX2a(2)      <---------At5g28300                      --------->HSFB2a(2)   <   cattttacgatgatggatcaatagaaggaaggaacccattaccgtccatgaaggagacgacacttggagacaataaacttgcagaagtcagagtttggat  20340600                      <----------DOF2                  ------>ZmHOX2a(2)                  ================================HOX2a_HOX2a                  ================HOX2a_HOX2a                 =================================HOX2a_HOX2a                 <---------GLK1(1)                 --------->GLK1(1)                --------->ARR14(2)                <---------ARR14(2)                <---------ARR11(3)                --------->ARR11(3)                <-----------ARR10                                >>>>>>>>>ARR2               <------ZmHOX2a(1)                                 >>>>>>>>>ARR1              ----------->ARR10                            ----------->GT1            --------->CCA1(2)              <------ZmHOX2a(1)   <---------YAB1          --------->CCA1(2)<------ZmHOX2a(1)              --------->DAG2 ---------TOE2(3)=================HOX2a_HOX2a            ---------->DOF2     >>>>>>>>>TBF1 ---------TOE1(3)<------ZmHOX2a(2) ------->TEIL        <------ZmHOX2a(1) <------ZmHOX2a(1)   tgaaggtaagagagataggatctgctttaggaaaatgaatctctaggaagaagtagaggaaaagtaagattgtgaggaagaagaagatgagatagtgaga  20340700                                                                  --------->LBD16                                                            --------->ATHB12                                                           <---------YAB1                                                  --------->YAB1 <---------ANAC55(2)               <-                                            ==================HOX2a_HOX2a  <---------ICU4         <--                                            <------ZmHOX2a(2)   <---------LBD16                 -----                                           <---------ARR11(3)   --------->ZAT18                 <----                                      <------ZmHOX2a(1)------>ZmHOX2a(1)--------->YAB1      ---------                                      =============HOX2a_HOX2a<---------WOX13(1)       ---------->DOF2                               <---------TOE2(3) <---------ATHB12--------->ANAC55(2)--------->TOE2(3)   gattgggatgagtaagagcgatttgaagatgatgaggtaaggagagatcaaatcatcctctgtgattgcgcaattcatagtgacaatctcaaagtaaaga  20340800                                                                                                    -                                                                                                   <-                                                                                                  ---                                                                                               ------                                                                                               ------                                                                                              -------           --------->HSFB2a(2)                                                                -------           <---------HSFB2a(2)                                                           <---------ZAT14     <---------YAB1                                                                      --------->ZAT14 ---------DOF2                    --------->ATHB12                                     --------->ANAC46 -------DAG2                     <---------ATHB12                                      --------->TGA1a ---->ARR11(3)    <---------GLK1(1)       --------->ATERF1(1)                   <---------ANAC58  --- -----ARR11(3)    --------->GLK1(1)  --------->ALFIN1                           <---------ANAC58 ---- ->DOF2   <---------LBD16--------->ZAT14  *TSS --------->AtMYB61     <---------ICU4    ==============   ccttttgatgattctgggagatttctctaaactcaatgagtggagacgaccaaaatttgtttgaacaaaactaatgacatttgcttctcacttcacaacc  20340900         <-----------GT1 -------->YAB1 --------ATHB12 --->MYB83                                                             --------->O2 ------>CBF --------------->AGL15                                      <---------O2 --->MYB46(3)      <----------ID1                                      <---------ANAC46 -->ANAC58  <----------DOF2                                        <-----------HVH21 -->ANAC58  <---------------AGL15                                --------->MYB59 --->MYB46(1) --------->ATHB12                           --------->ARR14(2) ----->WOX13(1)<------------CBF      --------->AHL20(2)  <---------ARR14(2) ======================bZIP_DOF ------------>CBF         --------->GLK1(2)                 <---------   aatcaggtttttttctttattgagacaaaaaaaaaacaatttaacagagaagagaagagaatccaattgggtcacgttgaatgggaaactgggctttctt  20341000                                   <-------TEIL                                  --------->CCA1(2)                                  --------->ARR14(1)        <----------DOF2          --------->ARR14(2)       --------->TOE2(3)         --------->ARR11(1)                                     --------->HSFB2a(2)     ------>MYB46(1)             <---------GLK1(2)                                      <---------HSFB2a(2)     -------->P                  <---------ARR14(2)                                 --------->ZAT2     ------>MYB83              ----------->ARR10                                    <---------At4g35610    <---------ALFIN1          --------->YAB1       <---------YAB1    <---------DAG2 --------->At4g35610 -DOF2 <---------DAG2  ------>NtERF2      ---------->DOF2        <---------At4g35610<---------ZAT2   ctatcccaaccttttttgtttttgaggcccaataagattcgatgaaaagggttctgatattacattgagcaccttatacaaacaccagctccagaaccca  20341100                                                                                 <---------AHL20(2)                                                                                 <---------YAB1                                           --------->ANAC55(1)                <---------RVE1(1)                                           --------->ANAC58                  <---------GLK1(2)                                           <---------ANAC55(2)               --------->ARR11(3)                                           --------->ANAC55(2)               <---------ARR11(3)                                       ------->TEIL                      <-------TEIL                                  <---------At4g35610                   --------->CCA1(2)                           <---------At4g35610                         --------->ARR14(2)                           --------->At4g35610------->TEIL             --------->ARR11(3)             <-----------GT1 ------->GAMYB --------->ANAC58            <---------ARR11(3) <-----------GT1<----------DOF2   --------->At4g35610                  <---------ARR14(2)        ----   aattcactactgaattaactttgctctgcaactgtctgatgaatcacgtatttcatgggtagaactaaaacaagatacagatttttattgaagagtgtat  20341200                <---------ICU4                                                       <---------ANAC58                <--------ATHB1<---------ANAC46                                       <---------ANAC58                -------->HAHB4<---------ANAC58                                   <---------ANAC58                --------->ATHB51                                                 <---------ANAC58               --------->AHL20(2)                                              <---------YAB1               <---------ATHB51                                              <--------ATHB1               <---------AHL20(2)                           --------->AHL20(2)<---------GLK1(2)               --------->ICU4 <---------ANAC58         ----------->GT1       --------->YAB1    <-----------GT1        <---------MYB52(1)         <---------ANAC46      --------->ICU4 ------->GT1   <---------ATHB12                       <---------HSFB2a(2)   <---------ATHB12   ggtcatttactatacaaataattgtctctgtttcgtagtgactaaatgaacaagttgtggaaaaaaatggggtcttcaatgattcttgcttcttctaaga  20341300  Previous    Next  AGI:  At5g49950.1    Description:  embryogenesis-associated protein-related. similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G34340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46977.1); contains domain PTHR10794 (PTHR10794); contains domain SSF53474 (SSF53474); contains domain G3DSA:3.40.50.1820 (G3DSA:3.40.50.1820); contains domain PTHR10794:SF8 (PTHR10794:SF8) Range:  from: 20336959    to: 20340842    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g49960.1    Description:  binding / catalytic. Identical to Putative ion channel DMI1 [Arabidopsis Thaliana] (GB:Q9LTX4); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G02940.1); similar to SYM8 [Pisum sativum] (GB:ABX57723.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46974.1); similar to DMI1 protein homologue [Pisum sativum] (GB:CAJ00334.2); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Protein of unknown function DUF1012 (InterPro:IPR010420) Range:  from: 20341190    to: 20345054    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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