Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->TOE2(3)                 --------->ARR11(3)                 <---------ARR11(3)                <---------CCA1(2)               <---------AHL20(1)                                                                <---               <---------ARR11(3)                                                         -----------               --------->AHL20(1)                                           <----------DOF2 ---------               --------->ARR11(3)                                           --------->TOE2(3)    <---               <---------AHL20(2)             ----------->RAV1(1)  ---------->DOF2    --------->At4g35610 ---------------->AG    <---------ATHB12    ------->TEIL      ----------->GT1       --------->YAB1   tatccaaattagtctaatatatctcaatgaagtccctcaaaacatgaaccacatataagaaatatggaaaaaagcttactttagtatcagaagagtttaa  20319200                                  ------>ZmHOX2a(1)                              >>>>>>>>>>WRKY63                                 --------->TOE2(3)                             --------->ANAC46                            <----------DOF2                                    --------->ANAC58                           ==============HOX2a_HOX2a                           --------->ANAC58   <-----------GT1         ============================HOX2a_HOX2a        --------->ZAT14 ------TOE2(3)           --------->ARR11(3)                               <---------ZAT14 >GT1                    <---------ARR11(3)                               <---------ZAT18 -------------->TaNAC69(2) ------>ZmHOX2a(2)    ------>ZmHOX2a(1)      <---------ANAC46 ------TOE1(3)    <---------ARR11(3)   --------->ATHB12               <-----------------------TaNAC69(2)   aggttttacatcttcaccaatatccatgatcttttcctcaaacattggtcctaaaaaaaacacagaaacaattcagtgtacaagtcaacaatttcaagta  20319300                                              <---------------AGL15                                        <------ZmHOX2a(1)                                      <---------TOE2(3)         ----------->GT1                            ----------->GT1   --------------->AGL15   --------->YAB1                      --------->AtLEC2<---------TOE1(3)       ---------->DOF2      ---------->DOF2  -              <-----------HVH21    <---------AHL20(2)      --------->YAB1   <---------AHL20(2)  -----   cttatccatctccagttgtcagccatgaagaggttaatttaaggaatacaaaaactggtaatgagaaagtaaacatagttaatggcaaagtagagaataa  20319400                            <--------ATHB1                            --------->ATHB51                            <---------ICU4                            <------------ATHB5                           <---------ATHB12                           --------->ICU4                      --------->ANAC58                      --------->ANAC58                     <---------ZAT14                     --------->ZAT14                 --------------->AtSPL3                <---------At5g28300                       ---------->DOF2                         <--               <-----------GT1                          --------->ANAC58                        <----     --------->ZAT6  --------->SPL7             --------->YAB1                                 ------   --------->YAB1--------------->AtSPL8    <------ZmHOX2a(2)         <---------------AGL15     <----- -------->WOX13(1) <---------SPL7  <---------ICU4       --------->ANAC58           --------->TOE1(2) ------>GT1 <---------ICU4 <---------ATHB51<---------ATHB12          --------------->AGL15   --------   gttaatcacactaacaattaccgtacacaataattcagcattgcgatcattcatgaagacgaaagaaattaacaaatatagaaaacatgagactctcatg  20319500                                              <------MYB46(1)                                              <------MYB83                                           <---------ANAC46                                          <---------MYB46(3)                                          --------->ATHB12                                      --------->ATHB12 <---------------AtSPL8            <---------MYB46(3) --------------->AtSPL8            <------MYB46(1) -------YAB1                       <------MYB83 -----ICU4                       <---------WOX13(1) --->ICU4   --------->ANAC58   --------->ATHB12         ----------->GT1 ----YAB1   --------->ANAC58  <---------YAB1<--------P<------ZmHOX2a(2) *TSS--------->YAB1      <---- ->YAB1   ---------->DOF2   --------->YAB1--------->MYB55(2)      ----------->GT1          <---------   atgagagtacctgaaagcaattgctctgaatcgtgattggttattggttggattggatcagaaaaatatggtaaacaagaataaaaccgtgagaattgtt  20319600                                                 --------->DAG2                                                ---------->DOF2                                             <---------ANAC46                                     <---------AHL20(2)                 <----------DOF2                                   ----------->TBP                      <---------DAG2           <---   <------NtERF2                 --------->CCA1(2)                <---------ANAC58               <--- -------RAV1(1)---------->DOF2  --------->ARR11(3)           ---------->DOF2     ---------->DOF2 <--- ---CBF       <------ZmHOX2a(2) <---------ARR11(3)----------->GT1 <---------ANAC58    <----------DOF2   gtggcagagaagaacgatcaagccgaagaagatagatatataaactttcgtaaagtgaatttgaaaagtcgtgactttttcaacaaagcttttttttttg  20319700                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                   --------->CCA1(2)                                                                                  --------->ARR11(1)                                                             ------>ZmHOX2a(1)    --------->ARR11(3)                                                             --------->LBD16      <---------ARR11(3)                                                           <---------LBD16     <---------------AGL15                                                           ----------->RAV1(2) --------------->AGL15                                                       --------->ARR11(3)     <-----------------AGL1                                                       <---------ARR11(3)     ----------------->AGL2                                                      --------->CCA1(1)       <-----------------AGL2                                                  <---------AHL20(2)          ----------------->AGL3                                                  --------->AHL20(2)          ----------------->AGL1                                                  --------->AHL20(1) <---------------AtSPL8     -----                                                  <---------AHL20(1) --------------->AtSPL8     -----                                              --------->AHL20(2)  --------->AHL20(2)       <------NtERF2                       <---------AHL20(2)     <---------AHL20(2)  <---------AHL20(2)     <---------ETT(2) ------ANAC46        ------->TEIL            <---------AHL20(2)   --------->ATHB12<---------ARR14(2)- ------ANAC58     <---------YAB1             --------->AHL20(2)   --------->ATHB51--------->ARR14(2)- ------ANAC58 <---------ANAC46     <---------TOE2(3)  --------->RVE1(1)      -------->P  --------->ETT(2)   tgtgtgtgtatttgtgacttatgaattttttgtgtttgagattagaatttaataaaatatctcctgaattatttgtactaaccagatatggtcgccagtc  20319800         <----------ID1      ---------->DOF2     ---------->DOF2  ----------->RAV1(1)  --------->AtMYB61 ------->DEAR3(1) ------->ANAC46 --------ALFIN1              --------->ARR11(3)                                                    <- ----NtERF2   --------->ANAC58                                                                     -- ------>ATERF1(1)            <---------ARR11(3)                                             --------- ------ATERF1(1)         ---------->DOF2                     ------->MYC3                   --------- ---->ANAC46  --------->ANAC58                <---------AHL20(2)                          ---------->DOF2 ---->RAP2.6(2)         --------->AHL20(2)   --------->AHL20(2)                        <----------DOF2 ----->NtERF2 --------->ANAC46<------ZmHOX2a(2)              <-------MYC3         <----------DOF2 --- ---------->RAV1(1)     <---------AHL20(2)   <---------AHL20(2)       <---------YAB1   --------->TOE2(3)   gccaccacaaaggcacaaacaactatttaaagatcaaaatcgtcttattaatttgggtcaaaacgtgtttttctgattttaaaactttactttaaagcaa  20319900                                            <---------AHL20(2)                                            <---------YAB1                                      <---------ARR11(3)                                      --------->ARR11(3)              --------->ARR11(3)       <---------AHL20(2)      -------->P   --------->AHL20(2)        --------->GLK1(2)      --------->AHL20(2)     <---------MYB111(1)           ----------->RAV1(2) --------AHL20(2)            --------->MYB46(3)         --------->GLK1(2)   --------->AHL20(2) ------->AHL20(2)            <---------MYB52(2)         --------->GLK1(1)   <---------AHL20(2) >ANAC58                     <---------MYB111(2) ---------->DOF2      <---------ARR11(3) >ANAC58 <---------TOE2(3)   <---------MYB46(2)<---------YAB1----------->HVH21 <---------YAB1       - ------>YAB1     --------->ANAC46     --------->GLK1(2)<---------GLK1(2)    <---------YAB1          <   ttttaatatttaatgtaacacactatttgtaactaccaaaaatctttttattaaagagattccctgaccaaaaatctttttattaatacagtatggccaa  20320000                                                                                         --------->YAB1                                                                                        --------->ZAT6                                                                                    <---------YAB1                                                                                  <--------HAHB4                                                                                  -------->ATHB1                                                                                  <---------AHL20(2)                                                                                  --------->ATHB51            <----------DOF2                                                       -------->HAHB4            <---------DAG2                                                        <---------ICU4           <---------DAG2                                                        <---------YAB1       <---------MYB46(2)                                                        --------->ICU4------       <------------MYB.PH3(2)        --------->ANAC58                           <---------ATHB51       <---------MYB111(2)            --------->ANAC46 --------->ARR11(3)     --------->AHL20(2)     <-----------GT1             <----------DOF2     <---------TOE2(3) ---------->DOF2--------->YAB1 -------->ARR11(3)          <----------DOF2----------->GT1          --------->YAB1--------->YAB1 ---------ARR11(3)  ------>ZmHOX2a(2) --------->ANAC58 <---------ARR11(3)   ----------->GT1  <-------   aacatcttaactacctttttgatctcaaaactttactttcaagcaatgtaaaactaagatttactgacaaaaataaagaagtaattattaatactaatga  20320100  Previous    Next  AGI:  At5g49900.1    Description:  catalytic. similar to catalytic [Arabidopsis thaliana] (TAIR:AT1G33700.2); similar to catalytic [Arabidopsis thaliana] (TAIR:AT4G10060.1); similar to catalytic [Arabidopsis thaliana] (TAIR:AT1G33700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16273.1); similar to hypothetical protein OsI_034437 [Oryza sativa (indica cultivar-group)] (GB:EAY80478.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46877.1); contains InterPro domain Six-hairpin glycosidase-like; (InterPro:IPR008928); contains InterPro domain Beta-glucosidase, GBA2 type (InterPro:IPR014551); contains InterPro domain Protein of unknown function DUF60 Range:  from: 20313744    to: 20319572    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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