Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------GLK1(1)                              --------->GLK1(1)                         --------->YAB1                    <------MYB83                      <---------ICU4                --------->LBD16                      --------->YAB1               --------->ANAC58                     <---------ATHB12              --------->ANAC46                  --------->MYB46(3)               --------->ANAC58                 --------->ANAC58                 <---------LBD16                 --------->ANAC46               <---------ARR14(2)                 --------->ANAC58               --------->ARR14(2)               <---------ALFIN1                --------->CCA1(2)              <---------ZAT18<---------ARR11(3)--------->GLK1(1)              --------->SPL7 --------->ARR11(3)<---------GLK1(1)           <------MYB83 <---------YAB1        <---------ARR11(3)           <------MYB46(1) <---------YAB1     --------->ARR11(3)                                  <--          <---------------AtSPL8              --------->ARR14(2)                                  ---          --------->MYB59<---------ICU4       <---------ARR14(2) <---------AHL20(2)          ------>ZmHOX2a(1)          --------------->AtSPL8     <---------ATHB12      <------MYB46(1)               <---------ZAT18      <---------AHL20(2)--------->ICU4    <-------TEIL   <--------PXXXXXXXXXXXXXXXXXXXX>MIR846    ---   gctagtataaatttggtacacccatcatgatgatatccaatcggttcagatatccgcaagttggttttaaattgaagtgcttcaatccctgtgtcctctg  20289400                                                                                              -------                                                                                              <------                                                                                              -------                                                                           --------->ARR11(3)--------                          <-------TEIL                                    --------->YAB1     ========          ----------->RAV1(1)          <---------MYB46(3)      <------MYB83<---------ARR11(3)======== -------ZAT14         <---------ARR11(3)      --------->TOE2(3)----------->GT1             <---------ALFIN1 ------>REM1(2)       --------->ARR11(3)<-------GAMYB          <------MYB46(1)          <-----------GT1 ------>ZAT14    <-------TEIL          ----------->GT1  <---------------AGL15  <-----------GT1<------   tgtagtagccctcaacagattcaagatgttcatattttagatggttaatctcaaactgcaaaatttggtgaaaaaatgatattacaaaatttcccacatg  20289500                                                                         <---------ANAC58         ---   --------->DAG2                                                        <---------ANAC46         ---  ---------->DOF2                   ----------->GT1                      <---------ANAC58         --- >MYC3                          ---------->DOF2                      --------->ALFIN1        <------- -MYC2            ----------->HVH21 <----------ID1                 <---------ANAC46         --------- >MYC2     --------->DAG2  ----------->GT1                         <---------ANAC58        <---------WOX13(1) ->TGA1a  ---------->DOF2 ----------->GT1                          <---------ANAC55(1)  <---------YAB1 ==================================bZIP_DOF                        <---------ANAC58<---------YAB1 --- ============bZIP_DOF    ------------------------>ANAC81   <---------At4g35610  --------->ICU4   <--- -MYC3<----------ID1    ---------->DOF2     --------->AHL20(2)   <---------At5g28300  <-----------GT1   cgaaaaaagcgaaaaagggtttgacagaaagataaaaagagaaaaaaaaaattctaatgtcatcttataccgtgtgcgtgtaagtattatacgattgacc  20289600       <-------TEIL   --------->HSFB2a(1)   <---------HSFB2a(1)   --------->HSFC1(2)                                                                       ---------   <---------HSFC1(2)                                                                       <-------- ------>ANAC58                                                                              <-------- ------>ANAC55(1)         <----------DOF2                                            <----------DOF2 ------>ANAC46            <---------DAG2                               --------->ATHB51     --------- --WRKY18(1)      <<<<<<<<<MYB2                                        --------->AHL20(2) <---------- >WRKY38(1)  <----------DOF2                               <---------------AGL15  <---------ARR11(3) ------>ANAC58<---------MYB52(1)                           --------------->AGL15  --------->ARR11(3) ------LBD16 ------>ZmHOX2a(1)                          --------->ANAC46         <---------CCA1(2)   acggaagggtccatcctttggttttccacttttgacatagtcgaaacgaatggactctatgccactaagagaataatttacatatatctttgttacatca  20289700                                         <---------ZAT2                                         --------->ZAT2                                         --------->At4g35610       <---------ARR14(2)                <---------At4g35610       --------->ARR14(2)               ------>ZmHOX2a(1)       <---------GLK1(2)              ----------->RAV1(2)  <-----------HVH21              <---------ANAC58 XXXXXXXXXXXXXXXXXXXX>MIR842     <---------ANAC58                       <---------HSFB2a(2) >REM1(1)                   <---------MYB46(3)                      <---------WRKY38(1) -bZIP60(1)                 <-----------RAV1(1)    --------->At4g35610  --------->HSFB2a(2) -TGA2(1)                <-----------RAV1(1)       <---------At4g35610--------->At4g35610      <----- >bZIP60(1)<-----------HVH21======================RAV             <-----------HVH21  ------->TEIL -GT1----------->ARR10   =========================RAV      <---------ATHB12 ------->TEIL  --------->ANAC46   tcgtggtcagatttgtcatcccacttactgttgttgcctctcctgctcccttccgcttccaatctttcggtcatctcgaacctgttgaatctacacaaat  20289800                                                                       --------->At4g35610                                                                       <---------ZAT2                                   <-----------GT1               <---------ARR11(3)   <------ZmHOX2a(2)      <------------CBF          --------->ARR11(3)     <------ZmHOX2a(2)             <---------ARR11(3)   ------------>CBF             <---------AHL20(1) --------->ANAC58    <---------At4g35610         <- -------CBF               ----------->GT1          --------->ANAC58    --------->ZAT2--------->ARR11(3)   tggatgccaattgtatgtgtttcttagtcagtaatatatacccttatccagccaaggatcaacacaagttctaagctgaacgaagaagatcaagttttgt  20289900                                        <-----------GT1                                      <---------MYB52(2)                                     --------->ANAC46                                     --------->ANAC58                             --------->ARR11(3)                                                   ---                 --------->At4g35610 --------->ANAC58                                         <------           ---------->DOF2   <---------ARR11(3)                                      <---------YAB1 --------AtMYB61----------->GT1  -------->P                              <-----------GT1<---------YAB1   tttggtggaaacaagaagcagataaaactaatatctaccaagtaacattttctgatattcgatgctctacatttttaagcacatatgctcattatacttt  20290000               --------->ARR11(3)   --------->ATHB51   <--------ATHB1   <---------AHL20(2)   --------->AHL20(2)                                                                <---------ANAC46   <---------ICU4                                                                <-------GAMYB  <---------ATHB12                                                              --------->MYB52(2) <-  --------->ICU4                                                              <---------MYB52(1) <---  <---------ATHB51     <---------GLK1(1)      ---------->DOF2              <---------TOE2(2)   ------ --------->CBF <---------ARR11(3)            --------->AHL20(2)      ----------->HVH21 <------ZmHOX2a(1) ----DOF2  <------ZmHOX2a(2)          ----------->GT1            <---------ZAT14<---------MYB46(3) --   ggcaataatttagatcagatattagagctctgaaacatagatgtaaataaaagaaacatagatagagagaactgacctatgttagttgaggagagagaga  20290100                                                                          ----------->GT1                                                                        ---------->DOF2                                                                     <---------HSFB2a(2)                                                      --------------->AGL15                                                      <---------------AGL15    <---------WOX13(1)                               <-----------------AGL3         --------->AHL20(2)  --------->ATHB12                                   <-----------------AGL2         --------->YAB1 --------At4g35610                      <------ZmHOX2a(1)      ----------->GT1   --------->YAB1 --------RAV1(2)                    ---------->DOF2  ----------------->AGL3    --------->AHL20(2) --->CCA1(2)               ====================HOX2a_HOX2a<---------AHL20(2)--------->AHL20(2) ------->ANAC55(2)         ------>ZmHOX2a(2)    --------->ALFIN1     --------->HSFB2a(2)   caggtgattgaactgagaggctatgttgatctataaccaaaaggatgaaggtgtttctatttatagggtttttagaaagaaaataataaaaaaaacattc  20290200                       --------->LBD16                       ------>NtERF2                      --------->DEAR3(1)                                                       ------                     <---------LBD16                                                    <---------YAB1                   <-----------GT1                    ----------->GT1                 <---------ICU4              --------->AHL20(1)               --------->ANAC58                      <---------YAB1              <---------AHL20(2)               --------->ANAC46                      --------->ICU4              <---------AHL20(1)               --------->ANAC58                    --------->YAB1             --------->AHL20(2)            --------->YAB1                         --------->ICU4    <             --------->YAB1    --------->AHL20(2)---------->DOF2    <-------TEIL  <---------YAB1 <---   taaatcgttttgcaattatattctccgcctaaaaaaaatgcagaattatacgaaagaagaaaaattcagattcaagaaaatgttatgattattaaactaa  20290300  Previous    Next  AGI:  At5g49870.1    Description:  jacalin lectin family protein. similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT5G49850.1); similar to jasmonate inducible protein [Brassica napus] (GB:CAA72271.1); contains InterPro domain Mannose-binding lectin (InterPro:IPR001229) Range:  from: 20287418    to: 20289774    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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