Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->YAB1                                  <--------HAHB4                                 <---------YAB1                                               <------                   <---------MYB46(3)                                                       <--------                   <---------REM1(1)                                                        <--------                <-----------RAV1(1) <---------YAB1           --------->At4g35610       --------->ATHB12             --------->ATHB12  <---------ZAT6                <---------At4g35610     <---------DAG2        <---------YAB1        <---------YAB1            <---------ANAC58    <---------WRKY18(1)    <-     --------->At4g35610    --------->YAB1              <---------ANAC58   ----------->HVH21<-------- ------->MYB46(3)  <-----------RAV1(1)              ---------->DOF2      <---------AtLEC2   <-------- ->TOE2(3)   --------->YAB1--------->ICU4      ----------->GT1        <-----------GT1<----------DOF2   aaccatcagcatcattcattgttgttgcaattagtattattatctcaagttgataaaagcttgtgctgattttttccatgaccatgactttattgcatgt  20239500                                                                                    <------ZmHOX2a(1)                                                                                 <---------HSFC1(1) <-------GAMYB                                                  <---------ANAC58 >>>>>>>ZML2  ------- -----RAV1(1)                                                   <---------ANAC58 --------->HSFB2a(2) -ANAC58                          <---------YAB1            <----------DOF2      --------->HSFC1(1) -AtLEC2                      <---------ANAC58        --------->RVE1(1)          <---------HSFB2a(2) --------ANAC46               <---------ANAC58       --------->GLK1(2)<---------------------WRI1    < -ANAC46             <---------ZAT14                 <---------ARR11(3)     --------->HSFB2a(1)  <--- -ANAC58             --------->ZAT14                 --------->ARR11(3)     <---------HSFB2a(1)  ----   tgctgttagaaaaaccatatcagtgcatagtcgcttaccattactctatttcaaaaatctctcttttcttgagaagaaacgttctaggaaaacaaataat  20239600                                   <---------AHL20(2)                                  <---------AHL20(2)                       --------->ZAT14                                              <----------DOF2 <-------TEIL          <---------ZAT14                       ----------->GT1        <---------DAG2 -->AHL20(2)           --------->ZAT18       <------ZmHOX2a(2)    <---------ANAC55(2) -----------GT1        <---------ZAT18      --------->ARR11(3)    --------->ANAC55(2)      <---------ANAC55(2) ------AHL20(1)     <---------ANAC46        <---------ARR11(3)  <-----------GT1     <---------------AGL15 ----->ARR11(3)<---------TOE1(2)  --------->AHL20(2)    <---------TOE2(3)        <---------YAB1   atatacatgacttctcccagttttgtgcagaaacaattaaatgttagatcatttagttaagttttgttacatattgcatatttatgctttatcatgtaaa  20239700                                     --------->YAB1                                    <---------YAB1                   ---------->DOF2 --------->AHL20(2)              --------->ATHB51            ----------->GT1        <---------AHL20(1) --------->ANAC58                       <-------        <---------TOE2(3)          <---------AHL20(2) --------->bZIP60(2)           <-----------GT1   <---------AHL20(2)             --------->YAB1      --------->ANAC58       ------>ZmHOX2a(1)   --------->AHL20(2)            <---------YAB1<---------ANAC58    <---------ICU4--------->ANAC46  --------->AHL20(2)   <------ZmHOX2a(1)       <---------ANAC58 --------->YAB1 <---------ALFIN1    --   cagatttatttatgtagttaataaaggactagtctattataatggtgttttgtgccaagtcattgttcataatttgttcctccacattaccgtattgaca  20239800                                                  <---------ARR14(2)                                         <---------AHL20(1)                                         --------->ARR11(3)                                         --------->AHL20(1)                                         <---------ARR11(3)                                    ------------>CBF                                    --------->LBD16                                            *TSS                                   --------->ANAC58                                           <------                                   --------->ANAC55(2)                                       <-------                                   --------->ANAC58                                          <-------                                   --------->ANAC46  <----------DOF2                         --------                                  <---------LBD16 --------->ARR14(2)                         <------- ----GT1                    ------->TEIL----------->TBP    <-----------GT1                   -------- ---------->CBF            <-----------GT1      <---------MYB46(3)                          >>>>>>>>>   tttcaatttctcccttggataatacctttgaacccttccgcaatatatagcggttctttattatctatatcaagttgaactatttgtttatatggtccac  20239900 ---ALFIN1 --WRKY12            --------->AHL20(2)                                                             < --ZAT14             <---------AHL20(2)                                                             - ->ZAT14          --------->YAB1                                                            --------- --WRKY38(1)--------------->AGL15                      <---------MYB52(1)                   --------- ->ZAT18    <----------DOF2                           <----------DOF2          ---------->DOF2 <----- >>>>>>>>LFY<---------DAG2     <----------DOF2        <---------DAG2  <----------DOF2     <---------RAP2.6(2)   tgtctatttgtttgctttatttataaattttcgcttaacttgttcaaagtcttctcctttatgtcttacatgctttgttagcaaagaacatggaggctgc  20240000                                    <-------MYC3                                    ------->MYC2                                    <-------MYC2                                 <---------At4g35610    <---------YAB1                  ------->MYC3                          <---------ANAC46   <---------TOE2(3)       <---------ZAT18                      <---------ANAC55(2) ---------AHL20(2)         <---------ZAT14                      --------->ANAC55(2) -------->AHL20(2)         --------->ZAT14                     <-------TEIL      --------->At4g35610 >ATERF1(1)           <---------ANAC58                     <---------YAB1 <---------ANAC58 >At4g35610           <---------ANAC58  <----------DOF2  ----------->GT1  <---------ANAC58 -NtERF2  <---------ZAT6   <---------At4g35610 --------->HSFB2a(2)  <---------YAB1   atttttatgttagagttcgtcataacttgtgcagaccacatgctttcttcttgaacgaattgtgatacatatcattgtgtgtctgatgaagatgagttca  20240100                            <----------DOF2                            <---------DAG2                           <---------ANAC58                       ------>ZmHOX2a(2)                     <---------ARR11(3)                     --------->ARR11(3)                           <---------MYB46(3)               <---------ARR11(3)                      <---------ANAC58          --------->YAB1               --------->ARR11(3)         <-----------GT1 <---------ZAT14  ----------->GT1    <------       --------->AHL20(2)  <---------ANAC58            <---------ANAC58<---------YAB1         -------   agaattggattatttaagctcttgatcttgcttttcttccaaatttactctgtttatgcgttcacagatggttcagattgtaagtataagtagatgatga  20240200                                                                       <----------DOF2                                                                  <---------At5g28300               -                              <---------AHL20(2)                --------->ARR14(2)                  -      <----------DOF2 --------->GLK1(1)                         <---------ARR14(2)                  -   <---------ARR11(3) <---------GLK1(1)  <---------YAB1     --------->ZAT18                         <   --------->ARR11(3)--------->ARR11(3)  <---------AHL20(2) <---------ZAT14                         -  --------->GLK1(1)  <---------ARR11(3) <---------AHL20(2)  --------->ZAT14  --------->ANAC58       - ---YAB1         ---------->DOF2        --------->AHL20(2)  <---------ZAT18  --------->ANAC46       - -->ICU4  <-----------GT1     --------->AHL20(2)        <-----------RAV1(1)  --------->ANAC58xxxxxxxx   tcagagttcttttaacagataaagatttccaattttttgtattttaattctttcaatattggtgcagttactgctttacaagccctgaagaacgaatggg  20240300                                                  <------MYB46(1) -------->ANAC55(2)                  --------->TCP20 -------->ANAC46                     --------->ARR14(2) -------->ANAC55(1)                  <---------ARR14(2)                   ------->GAMYB ---------ANAC55(2)           <---------ANAC58    <------MYB83          <---------At5g28300 -------->ANAC58              <---------ANAC58  <--------P          --------->YAB1 -------->bZIP60(2)--------->DAG2 <---------HSFB2a(2)      --------->ANAC46                         - -------->ANAC58  ---------->DOF2 --------->HSFB2a(2)      --------->ANAC55(1)              <-------- xxxxxxxxx>smallRNA(se3)     ------>ZmHOX2a(2) <---------ANAC46     --------->TOE2(3)     <----------   acacgttatccaagagttggaaaagctctgatccttgtggaaccgaatgggttggaattacatgtaacaacgataaccgtgttgtttcaatgtaacacct  20240400  Previous    Next  AGI:  At5g49770.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G79620.1); similar to ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G49780.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G49760.1); similar to Protein kinase domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95747.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46943.1); similar to unnamed protein product [Vitis vinifera] (GB:CA Range:  from: 20239895    to: 20244493    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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