Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------AHL20(1)                                                         --------->AHL20(1)                                                         <---------AHL20(2)                                                        --------->YAB1                                                ------->TEIL                                              ------->GAMYB           --------->ICU4                    <---------MYB52(2)          --------->DAG2      ----------->GT1                        --------->MYB46(3)     --------->ANAC58   --------->YAB1                          <-----------GT1<---------YAB1---------->DOF2  <-------TEIL                 --------->AHL20(2)       --------->AHL20(2) ---At4g35610      ----------->GT1         --------->MYB52(1)       --------->ANAC58   cacgttcatagtaaaaatgaaatgtaacaaaaaaaaaatgaaatgtaacgaacccgaattatatttggacaagaaaaagtcaagttagtattcaagaatt  20107600                                --------->ANAC58                                ============================bZIP_DOF                                --------->bZIP60(2)                                --------->TGA1a                                --------->O2                      <---------MYB52(1)                     <---------RAP2.6(3)                    <---------ANAC46                                                                <             --------->MYB46(3) --------->ANAC58                                <----------ID1      <        ----------->GT1         --------->ANAC46                           ----------->HVH21        -     ------>MYB83   <---------ANAC58                  ----------->GT1 <---------ATHB12     <---------AHL20(2)     ------>MYB46(1)<---------ANAC58             ---------->DOF2  <---------ZAT14         <---------AHL20(2)   <---------MYB59 ----------------->AGL1 --------->ALFIN1        --------->ZAT14         --------->AHL20(2)   agagaccaaattgtaacaaatgccgtttggagacacgacacaatgtgggaataaagaagaaaaaaaactgcaatgaagtgaagggacaaaaattaaatgc  20107700              --------->DEAR3(1)             --------->DEAR4(2)            <---------ATERF1(1)            ------>NtERF2                           <---------ALFIN1          --------->ZAT18                      --------->ANAC58          <---------ABI4(2)                    --------->ANAC46          --------->ATERF1(1)                --------->ANAC58          <------NtERF2                      --------->ANAC46         <---------ATERF1(1)                 --------->ANAC58        --------->ANAC58                     <---------ALFIN1        <---------DEAR3(1)                 <---------ALFIN1        --------->ANAC58              --------->ANAC46              --------->WRKY38(1)        --------->ANAC46              --------->ANAC58    <---------ANAC46       --------->RAP2.6(3)            --------->ANAC58--------->DEAR3(2)                            <       --------->SPL7                --------->SPL7----------->HVH21----------->HVH21               <      <------ZmHOX2a(1)            <---------SPL7 <-----------HVH21 --------->WRKY12               <-      ========================HOX2a_HOX2a----------->RAV1(1) --------->WRKY12                 <------   --------->At4g35610            ------->GAMYB--------->ANAC58 <---------LBD16               <------   <------NtERF2                 --------------->AtSPL3--------->DEAR3(1)                     -------   <---------At4g35610        --------->MYB46(3) --------->ANAC46  <-----------HVH21         -------- ---------At4g35610         --------->YAB1 --------->ANAC58  --------->WRKY38(1)             -------- ------NtERF2<------NtERF2--------->AtLEC2 --------->ANAC58 --------->DOF5.7(2)       <----------DOF2 -------->At4g35610    ------>ZmHOX2a(2)--------->ANAC46--------->LBD16           <----------DOF2  --   tcggcagaggacggcaccgtcttgatccattcacaaccgtacgccacacacccctcaccggcgtttaccggtgaccagtgttttctttctttctattata  20107800                                                               --------->YAB1                                                              <---------YAB1                                                            -------->ATHB1                                                            -------->HAHB4                                                            --------->ATHB51                                                            <--------HAHB4                                                            --------->YAB1                                                           --------->ICU4                                                           <---------ATHB51                                                         --------->YAB1                                                         <---------ICU4                                                        --------->ICU4                                                        --------->AHL20(2) ---------YAB1                                          <---------AHL20(2) ---------AHL20(2)                                   --------->AHL20(2) --------AHL20(2)                           --------->ANAC58<---------ICU4 ---AHL20(2)                                ----------->GT1<---------YAB1 ---AHL20(1)    <---------AHL20(2)          --------->ANAC58<---------AHL20(2) -->AHL20(1)<---------AHL20(2)  <------NtERF2        <---------AHL20(2)                             < ->YAB1   --------->AHL20(2)    --------->LBD16     --------->AHL20(2)               <---------HSFC1(2) ->AHL20(2)<---------YAB1     <---------LBD16     --------->YAB1 <---------YAB1      --------->HSFC1(2) ------->AHL20(2)       <----------DOF2  <----------ID1 <---------ATHB51<----------ID1     ------>ZmHOX2a(1)   ttttaattccatttttattttatattcttttgcccgcgtaaatgagacgaaataataaataattattataaaaaaaaacaaatgggaaacctcctaaatc  20107900          --------->LBD16         --------->HSFC1(1)                 --------->ANAC46         <---------HSFC1(1)                 <---------ALFIN1     --------->GLK1(2)         <---------HSFB2a(2)              <-----------GT1        <---------ARR11(3)               ---         --------->HSFB2a(2)     ----------->GT1                 --------->ARR11(3)    --------->AHL20(2)        <---------LBD16        ---------->DOF2            --------->TOE2(3)           --------->AHL20(2) ---------ZAT2               --------->ANAC46          <---------CCA1(2) <-----------GT1         <---   caagctgttttccagaagaacccaaaactccacaaaagttatattcacacctctctcttatctcaaaaatcttataaaccattacaaaataaaaaacata  20108000                                          --------->ANAC55(2)                                          --------->ANAC58                                          --------->ANAC46                ---------->DOF2     --------->HSFB2a(2)                  --------->ANAC58               --------->YAB1  *TSS  ---------->DOF2          <-----------GT1                   <---------ARR11(3) ------>YAB1  ---------->DOF2<----------DOF2  <---------ARR11(3)   --------->ARR11(3) ------AHL20(2)    ---------->DOF2   --------->ANAC46             <---------CCA1(2)                <-   taatcacccagaaagctaaagaaaagttttccttttttcccctcacgaaatctcagagaagatgatatatatctataaaagtatcatctcatagattcca  20108100                                                --------->MYB46(3)                                          --------->YAB1                                          <---------ICU4                                         <---------YAB1                                       --------->YAB1                                      <---------YAB1                                    --------->YAB1                                   <------ZmHOX2a(2)                                  <---------ARR14(2)                     <------ZmHOX2a(2)    <------ZmHOX2a(2)                                  <---------ARR11(3)                    ------------------------>ANAC81                                  --------->ARR14(2)                    --------->ARR11(3)   <-------                                 <------ZmHOX2a(1)                     --------->GLK1(1)     --------                        ---------->DOF2<---------ICU4            ---------->DOF2         ---------->DOF2 ---------DOF2     ----------->GT1--------->ARR11(3)         ----------->RAV1(1)     <----------ID1   tcttttctctattacatggagaagaaaaaagaagaggatcatcatcatcaacaacaacaacaacaacaaaaggagatcaagaacacagagacaaagatcg  20108200                                                                          --------->TGA2(2)                                                                         <-----------TGA1                                                                        <---------bZIP60(1)                                                                        --------->bZIP60(1)                                                                        <---------TGA2(1)                                                                        <---------ANAC58                                                                        --------->TGA2(1)                                                                        --------->ANAC55(2)                                                                        --------->ANAC58                                                                        <---------ANAC58                                                                        --------->ANAC58                                                                        <---------ANAC55(2)                                                                       --------->MYB59                                                                       <-----------STF1                                                <---------ICU4 --------->ARR14(2)                                                --------->YAB1 <---------ARR14(2)                                               <---------YAB1  --------->GLK1(2)            <--------                                       --------->YAB1          <---------ARR11(1)         <---------MYB46(3)                                     --------->ANAC58          <-----------ARR10   --------->YAB1<---                                     --------->ANAC58  <---------ICU4 <-----------GT1<---------YAB1                            <---------GLK1(1)<---------ICU4    ------->TEIL       <------ZmHOX2a(2)                            --------->GLK1(1)--------->YAB1   <---------ARR14(1) --------->ARR11(3) --ARR11(3)              --------->ANAC58   <---------YAB1  <---------ANAC58     <---------ARR11(3) ->ARR11(3)              --------->ANAC58 --------->YAB1    <---------ANAC58 <---------At4g35610 ----   agcaagaacaagaacaagaacaaaaacaagaaatctctcaagcatcatcatcatcaaacatggcgaatctagttacgtcatcagatcatcatccgttgga  20108300       <---------GLK1(1)                                                          --------->YAB1       --------->GLK1(1)                        ------>ZmHOX2a(1)              --------->YAB1 <---------At4g35610                            =========================HOX2a_HOX2a <---------STY1(2)                             --------->TOE2(3)              <---------ATHB12 ====== --------->At4g35610                         ---------->ID1       =========================HOX2a_HOX2a <---------ZAT2                           <----------DOF2         <------ZmHOX2a(2)            ------ --------->ZAT2                          <---------DAG2           =================================== -MYB52(1)        --------->YAB1      <-----------GT1            <---------ARR11(3) ================= ------At4g35610--------->ANAC58    <----------DOF2   <---------YAB1        --------->YAB1<----------DOF2 ----->ZAT2     --------->ANAC58   <---------ICU4  <---------YAB1--------->ARR11(3) ------>ZmHOX2a(1)   gctagctggaaatctctcaagcatcttcgatacttcatctttaccttttccttattcttatttcgaagatcactcttctaataatcctaattctttccta  20108400              ==========================HOX2a_HOX2a              ===================================HOX2a_HOX2a              <------ZmHOX2a(2)       ------>NtERF2 <---------MYB52(1)      <---------ETT(1)   <---------ANAC58      ----------->HVH21  <---------ANAC58                                    <---------ATHB12 ====================HOX2a_HOX2a               <------------------------ANAC81 >ZmHOX2a(1) <---------ARR11(3)                <----------DOF2      ------>ZmHOX2a(1) --------->MYB46(3) =HOX2a_HOX2a--------->ARR11(3)           ------>ZmHOX2a(1)    <----------DOF2--------->YAB1   <----- ====================HOX2a_HOX2a ------>ZmHOX2a(1)          ------>NtERF2--------->LBD16 <---------ALFIN1   gacttgctccgacaagatcatcagtttgcttcttcctctaattcctcttctttttcattcgatgcctttcctctccccaataacaacaacaacacctctt  20108500  Previous    Next  AGI:  At5g49520.1    Description:  WRKY48 (WRKY DNA-binding protein 48); transcription factor. Identical to Probable WRKY transcription factor 48 (WRKY48) [Arabidopsis Thaliana] (GB:Q9FGZ4); similar to WRKY71 (WRKY DNA-binding protein 71), transcription factor [Arabidopsis thaliana] (TAIR:AT1G29860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44934.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 20108002    to: 20110572    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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