Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->AHL20(2)                         <---------AHL20(2)                      --------->YAB1                      <--------HAHB4                      -------->HAHB4                      <--------ATHB1                      <---------ICU4                      --------->ATHB51                     --------->AHL20(2)                     <---------ATHB51                         <---------YAB1                     --------->ICU4                           <---------AHL20(2)                     <---------YAB1   <----------DOF2        --------->AHL20(2)           --------->AHL20(2)           --------->TOE1(3)      --------->DAG2          <------ZmHOX2a(1)               <---------AHL20(2) -----DOF2 --------->TOE2(3)   --------->ARR11(3)       <---------TOE2(3)--------->AHL20(2)  -------- ---GT1    <----------DOF2 ---------->DOF2            ---------->DOF2    <---------AHL20(2) <-------- ---------ANAC81--------->TOE2(3)---------->DOF2------->TEIL--------->CCA1(2)       --------->TOE2(3)   ttcatccctattactttaacttaataattaaaagataaagctttttagtgtatgtataaaggatataatagaaatttatatagttttcttaattaatgta  20087600                                   <---------YAB1                                 --------->YAB1                                 -------->HAHB4                              <---------ICU4                             --------->ICU4                             <---------------AGL15                             --------------->AGL15                       --------->ANAC46                                                             <                       --------->ANAC58                                                            --                       --------->ANAC58                                                            <-                      --------->ZAT18                                      ------->TEIL            --                      <---------ZAT18                              <---------ARR11(3)              <-                     <-----------GT1                               --------->ARR11(3)         -------                <----------DOF2 <---------YAB1                     --------->GLK1(2)    <---------YAB1             --------->ZAT6 ----------------->AGL3                <---------GLK1(2)    --------->AHL20(2) --->GT1   <-----------GT1  <-----------------AGL3              <---------TOE2(3)     <---------AHL20(2) -TOE2(3) ----------------------->TaNAC69(2)               --------->WOX13(1)        --------->AHL20(2)   aaacatgtcaaaataacacttttgtacgctactaattatagttctaaatttcaaaaactatcaattaagaatctttgaatctgttgaattaatatagaga  20087700                                                                                  <---------MYB59                                                                                  ------->GAMYB                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                               ------->GAMYB                                                                              --------->MYB46(3)                                            <---------ARR11(3)           --------->YAB1                                            --------->GLK1(2)           <---------YAB1 ---------ICU4                             --------->RVE1(1)           --------->AHL20(1) ------->ICU4                          --------->AHL20(2)              <---------AHL20(2) --------AHL20(2)                     --------->AHL20(2)               --------->AHL20(2) ------->AHL20(2)                   --------->TOE2(3)             --------->AHL20(2)------>MYB46(1) --------ATHB51                     --------->TOE1(3)        ----------->GT1--------->YAB1         -- ---->GT1 <---------TOE2(3)   --------->TOE1(3)    <------ZmHOX2a(1)  --------->YAB1------>MYB83  ---   aataattagtttaagaaaatggtctatttatagcttaacattaaaaaatctgaggaacaaaaacagtataaattataataacaaccaaattttgaccaaa  20087800                            --------->ATHB12                            --------->ATHB51                            -------->HAHB4                            <--------ATHB1                            <---------ICU4                       --------->AHL20(1)                            --------->ANAC58                       --------->AHL20(2)                    <---------ATHB12                      --------->YAB1                        ------>MYB83 --------->ANAC58       --------->AHL20(2)  <---------YAB1                   ------>MYB46(1)      <---------ZAT6      <---------AHL20(2)   --------->ICU4                --------->MYB46(3) <----------DOF2      --------->AHL20(2) --------->YAB1                <-----------GT1   --------->ANAC58 ------->YAB1       --------->AHL20(2)         ---------->DOF2       --------->ANAC58 ------>ICU4 <----------ID1<---------ATHB51 <---------ANAC55(2)    ---------->DOF2   --------->AHL20(2)   atgatgaaataaataacaacaaaaaaataataattgggagaaaaataagtaaagaagtaaccaatctttcaaagcaagctttagagataatatagtcaaa  20087900                                                       --------->ANAC58                                                       --------->O2                                                       --------->ANAC46                                                       --------->ANAC55(2)                                                       --------->ANAC55(1)                                                       <---------TGA1a                                                       ===============================bZIP_DOF                                                       <---------O2                                                       --------->TGA1a                                                       --------->ANAC58                                             --------->ANAC58                                             --------->ANAC58               --------->O2           <-----------GT1<---------ALFIN1*TSS  ---------->DOF2        ---              ------>NtERF2       ----------->TBP  <---------ALFIN1  --------->RVE1(1)            ---             <---------ALFIN1   <-----------TBP --------->PCF2      --------->ARR11(3)          -----     <----------DOF2    ----------->RAV1(2) --------->SPL7          <---------ARR11(3)      ---------   catttgacttttgagccacctctcatccctggccttatataaaccttacgctcccacacgtcttctctaaaatctcttaaagcttccttcacaatctcaa  20088000                                                                                --------->GLK1(2)                                                                           --------->DEAR3(1)                                                                         --------->ABI4(1)                                                                        --------->DEAR3(1)                                                                        --------->AtMYB61                                                                        <---------ALFIN1                                                                       <---------MYB55(2)                                                                       --------->MYB46(3)                                                                     ------->GAMYB               ----                                                           --------->ARR14(2)   --------->ARR14(2)                                                   <---------GLK1(2) --------->ANAC46            ---- ------>ANAC58                                  <--------P --------->GLK1(2)--------->LBD16<---------ETT(1) ------>ANAC58                               --------->HSFB2a(2)     --------->AtMYB61<<<<<<<<<SARD1 ----->DOF2                                  <---------HSFB2a(2)    --------->MYB46(3)<<<<<<<<<CBP60g >TOE2(3)                                 ------>ZmHOX2a(1)<---------ARR14(2)   <---------ARR14(2) <-   aagccatttttcaaatttcaaactcagagagagagagatgtgtccttctggtagaatcgcgattccgataaccaccaccgcgaatccaaatttccgacca  20088100                                                      <---------ZAT18                                                      <-------TEIL                                                      --------->ZAT14                                                    --------->LBD16                                                   <---------ANAC58                                                ------>ZmHOX2a(2)                                               <---------GLK1(1)              ----------->GT1                                               --------->GLK1(1)     <---------GLK1(1)                                              <---------ARR14(2)     --------->GLK1(1)                                              --------->ARR14(2)    <---------GLK1(2)                                              --------->ARR11(3)    --------->ARR14(2)                                         --------->DEAR3(1)       --------->LBD16                                     <---------At4g35610         --------->RAP2.6(2)                                     <---------ZAT2<---------ANAC58 <---------ARR14(2)                            --------->At5g28300<------ZmHOX2a(2) --------->LBD16       <---------ATHB12    ----------->GT1    <---------ARR11(3)<---------LBD16           ------->GAMYB ----->At4g35610       --------->ANAC46 --------->At4g35610    ------>NtERF2<---------LBD16 ----->ZAT2         <------ZmHOX2a(2)--------->ZAT2<---------ANAC46<------NtERF2       --------->MYB52(1) ---------DOF2     --------->ARR11(3)--------->At4g35610      --------->ANAC46--------->LBD16       <   gctttcgaaatcatcgacacagatcacgacggtaaaatcagcagcgacgatctccgtgcattctacgccggaatcccttccggtgaaaacaacgacgaga  20088200                                                                                                   --                                                                                                  ---                                                                                                  ===                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                            --------->ANAC58                                                     ----                            --------->ANAC58                               >>>>>>>ZML2        -------                         <---------ZAT18                                   <---------HSFC1(1) <------                         ----------->HVH21                                 --------->HSFC1(1) <------                         <---------SPL7                                    --------->HSFB2a(2)<------                        <---------------------WRI1                         <---------HSFB2a(2)-------                        <---------ANAC58                                --------->ARR11(3)   --------                        <---------ANAC46                              --------->HSFB2a(1)    <-------                        <---------ANAC58              <---------------------WRI1      <------NtERF2==               --------->bZIP60(1)                 <---------ANAC58   --------->HSFC1(2)     <-------               <---------GLK1(1)                <---------MYB52(1)    <---------HSFC1(2)     <-------             --------->YAB1--------->SPL7    <-------TEIL             <---------HSFB2a(1)<---------MYB52(1)            <---------YAB1------>NtERF2    --------->ARR14(2)    <---------HSFC1(1)  ------>NtERF2<--    ------>ZmHOX2a(2)  <---------At4g35610 <---------GLK1(2)     --------->HSFB2a(2)--------->DEAR3(1) --------->ATHB12      --------->At4g35610 <---------ARR14(2)    <---------HSFB2a(2)--------->ANAC46 ---------YAB1 <---------bZIP60(1) ---------->DOF2 <---------ANAC58 ---------->DOF2 <---------DEAR3(1)   cgatgatcggaacgatgatatcagtagcggacgcgaacaaagacggattcgttgagttcgatgaattcgagaaagttctagaaacgacgccgttttctag  20088300         xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       ------->GAMYB    --------->MYB52(1) ---->ZmHOX2a(2)                                                                           ---------- ------>CCA1(2)                                                                      ------>ZmHOX2a(2) =================HOX2a_HOX2a                                                       --------->CCA1(2) ------ARR14(2)                                                                     <------ZmHOX2a(2) ----->AGP1                                                                         --------->At4g35610 ------AGP1<------ZmHOX2a(1)                                                       <---------ARR11(3) ------ARR11(3)                                                                    --------->ARR14(2) ----->ARR11(3)                                                                    <---------ARR14(2) ----->ARR14(2)                                                                    --------->AGP1 -------->AGL15                                                                    --------->ARR11(3) ---HSFC1(1)                                                                       <---------AGP1 ---HSFB2a(2)                                                                      <---------ARR14(3) ---------AGL15                                                                   <---------GLK1(1) -->HSFB2a(2)                                                                     --------->GLK1(1) --------->AGL2                                     ---------->DOF2              ----------->ARR10 ----------AGL2                                <---------ANAC46                --------->LBD16 =================HOX2a_HOX2a                  <---------WOX13(1)             <---------ANAC55(2) ----------AGL1             ---------->DOF2 --------->ALFIN1                  <---------ANAC46 ----------AGL3           <---------YAB1 <---------TOE1(3)                   <---------LBD16 ----ZmHOX2a(2)       <---------WOX13(1) <---------TOE2(3)                  --------->MYB52(1)   atctggtaacggaggagacgatggattgatgaaagatgtgtttaaggtgatggataaagacggagatgggagactgagttacggagatctgaagagttat  20088400                                                                                      ----------->HVH21                       --------->TOE2(2)                                          <---------ANAC58                       --------->TOE1(2)                                --------->MYB52(1)               <---------At4g35610                                 <---------AHL20(2)--------->SPL7               --------->At4g35610                          ----------->GT1       <---------ANAC58         <------MYB83  ------->GAMYB                       --------->ALFIN1  <---------ANAC58         <------MYB46(1)                                   <---------DEAR3(1)<---------ANAC58    <---------RAP2.6(2)--------->DEAR3(1)                  <---------AtMYB61<------NtERF2 <---------GLK1(2)    <------------AtMYB77              <---------DREB2C(2)------>NtERF2 --------->ARR11(1)   --------->MYB46(3)                <---------DEAR3(1)<---------DEAR3(1) --------->ARR14(2)   --------->DEAR3(2)    --------->ATHB12<---------MYB46(3)<----------DOF2  ------ <---------ARR14(2)----------->HVH21       <---------YAB1 <---------MYB52(1)<---------------------WRI1 ->GT1<---------At4g35610<---------------------WRI1    <---------LBD16 ----------->HVH21       <-----   atggattcggctggtttagctgtaaccgacgatgaaatcaaatctatgattcgattagccggtggtgatttaaacgacggcgtttcgttcgacggtctgc  20088500  Previous    Next  AGI:  At5g49480.1    Description:  ATCP1 (CA2+-BINDING PROTEIN 1); calcium ion binding. similar to CAM4 (CALMODULIN 4), calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G66410.1); similar to CAM1 (CALMODULIN 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT5G37780.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67470.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 20087969    to: 20088864    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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