Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->LBD16                                                                               --------->GLK1(1)                                           --------->ANAC58                    <---------GLK1(1)       <---------MYB46(3)             --------->LBD16                          ---------->DOF2      --------->ALFIN1               --------->LBD16                          <---------ARR14(2)      <---------AtMYB61            <------NtERF2     ------>MYB46(1)          --------->ARR14(2)      <---------DEAR3(1)           <---------LBD16   ------>MYB83       <---------O2<---------bZIP60(2)    <---------ANAC46             <---------PCF2 --------->AtMYB61       --------->TGA1a   <---------DEAR3(1)           <---------ABI4(2) --------->ANAC46      ==================bZIP_DOF  <---------LBD16               --------->ATERF1(1)<---------MYB46(2)   <---------TGA1a --------HSFB2a(1)              <------NtERF2   --------->DEAR3(1)     ------>MYB83 <---------ANAC58 ------->HSFC1(2)          --------->ALFIN1--------->ANAC58   ----------->RAV1(2)   <---------ANAC58 --------HSFC1(2)        --------->ZAT2   --------->DAG2 ---------->CDC5--------->O2<---------ANAC46 ------->ZAT2            --------->At4g35610    <---------ALFIN1       ------>MYB46(1)              - --------At4g35610       <---------ZAT2  ---------->DOF2 =========================MYC_MYB          -- --------ZAT2            <---------At4g35610   --------->MYB46(3)   --------->DEAR3(2) --------->REM1(2) ------->At4g35610      --------->GLK1(2)=========================================bZIP_DOF      ----- ------>GLK1(2)   --------->MYB52(1)<---------LBD16--------->DEAR3(1) --------->MYB52(1)        ----- -->DOF2       ----------->RAV1(2)------>NtERF2<---------ABI4(2)    --------->MYB46(3)--------->ALFIN1   aagctgcggtggtgatgacctgagggaagctggtggcaccgggaaaagcaccaccgaacttagcgcctggaccaacgtcggaaatgccgtggagagcctc  20033600                                          ----------->RAV1(1)                                        --------->ATERF1(1)                                        <---------At4g35610              ------>ZmHOX2a(1)                                       <---------RAP2.3(1)             ----------->RAV1(2)                                       <---------ATERF1(1)        ------>ZmHOX2a(2)                                       <---------ERF1             ==============HOX2a_HOX2a                                       ------>NtERF2             ===============HOX2a_HOX2a                                      <---------DEAR3(1)         --------->HSFB2a(1)                                      <---------RAP2.6(2)        --------->GLK1(1)                                      --------->ATERF1(2)        <------ZmHOX2a(2)                                      <---------RAP2.3(2)       --------->ARR14(2)                                      <---------ATERF1(2)       --------->ARR14(3)                                     <---------LBD16            <---------ARR11(3)                                    <---------ATERF1(1)         --------->ARR11(3)                                    <---------RAP2.3(1)         <---------ARR11(1)                                   <---------DEAR3(1)           <-----------ARR10                                  --------->SPL7                <---------ARR14(3)        --------->YAB1          <---------SPL7                  <---------ARR14(2)       <---------ATHB12       <---------------AtSPL3           <---------ARR14(1)    <---------ALFIN1          --------->ALFIN1                 <---------CCA1(2)                <----    --------->AtMYB61       <---------O2--------->At4g35610   --------->LBD16                   -----   --------->MYB46(3)       <---------TGA1a                  <---------ANAC55(2)                <---- <---------ALFIN1           <---------bZIP60(2)              <---------ANAC58                   ----- --------->AtMYB61          <---------ANAC58                 <---------ANAC46 --------->TGA1a   ----- -------->MYB46(3)          --------->TGA1a<------NtERF2     --------->ANAC55(2)                <---- ------->SPL7               <---------ANAC46                 <---------ANAC58 <---------TGA1a  <----- ---->TOE2(1)               --------->O2<------NtERF2       <---------LBD16   --------->O2     <----- ---->TOE1(1)               <---------ANAC58              --------->ALFIN1    <---------O2--------->LBD16   ggaccaccactcatagcctccaataccgagacgtggtacggcggcagcattgttgacgaggttgcggatcttctcctgcaacgtgagccttccgagcaaa  20033700                                             <---------SPL7                                            <---------ANAC58                                            --------->ATERF1(1)                               ----------->RAV1(1)                        --------->ANAC58                              <---------ETT(1)                            --------->ANAC58 -----ARR14(2)                --------->ANAC58   --------->LBD16          --------->AtLEC2 ---->ARR14(2)                ----------->HVH21<---------LBD16           <-------MYC3 -----ARR11(1)                --------->ANAC58 --------->SPL7            ------->MYC3             --- ---->GLK1(2)        <-------TEIL           <---------ANAC58         <------ZmHOX2a(2)      --------- ---->ARR11(3)      <<<<<<<<<<<<<<<<<LFY--------->LBD16        --------->At4g35610  <---------MYB46(3) -----ARR11(3)   ------>ZmHOX2a(2)    <---------LBD16         --------->MYB52(2)   --------->ALFIN1 ----ARR14(1)  <---------ARR14(2)   <---------ARR14(2)        <---------MYB46(3)   <---------AtMYB61 ----CCA1(2)   --------->ARR14(2)   --------->ARR14(2)      <---------MYB52(1)<<<<<<<<<<<<<<<<<LFY---   tcttgaactctcacatggatcggtacattggcccgacagaaccggagcgtccgggttaacccgtttgctggatcacatgcaaacagtggtcgaagtgact  20033800            ------>MYB83                                                    --------->ANAC58            ------>MYB46(1)                                                 --------->ANAC58      --------->ZAT18                                                       --------->ANAC46      <---------ZAT14                                                --------->YAB1       <---------ARR11(3) <---------TGA1a      <------ZmHOX2a(1)                             <---------YAB1        --------->ARR11(3) <---------O2  --------->TOE1(2)                      <------ZmHOX2a(2) <-----------GT1  <---------CCA1(2) -------->HVH21--------->TOE2(2)           <----------DOF2      <---------DAG2<---------ARR11(3)    < -->HVH21 <---------MYB59               ------>NtERF2 <---------ATHB12 <---------YAB1--------->AHL20(2) -------->TGA1--------->YAB1   --------->YAB1<-----------RAV1(1)<----------DOF2    --------->AHL20(2)   ctgacgagtgaaccaaacataagaggaatacaagtataacgacgactttgttgccgatcaatagtgctttattataacaagacatttttatatatctgtg  20033900                                                                                                   <-                                                                                                  ===                                                                                                  ---                                                                                                 <---                                                                                                 ====                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                                -----                                         --------->ICU4                ---------->DOF2   <---------AHL20(2)     ------->TEIL            --------->REM1(2)                      *TSS        --------->YAB1 <----- ---------ANAC46 <-----------GT1         <---------YAB1        --------->ANAC55(2)     <-----------TBP   ttttgtgtatgtgtgtttgtaactatatgtgtgtatacatgtgatgtttgtgttttttagttttcatgtgatagaaagtgaatgatggtatttatagaga  20034000                                                                                                    < ---------DOF2                                                                                      - ==============================HOX2a_HOX2a                                                          < --->ZmHOX2a(2)                                                                                     - ------RVE1(1)                                                                        --------->ARR14(2) ==============================HOX2a_HOX2a                   ----------->GT1      <-----------RAV1(2) ---ZmHOX2a(2)                                         <---------YAB1  <---------ARR11(3)--------->ANAC58 -----ARR11(3)          <------ZmHOX2a(1)        --------->AHL20(2)    --------->ARR11(3)<---------ANAC55(2) ---->AGP1 <------------CBF      --------->GLK1(2)     <---------TOE2(3)<------ZmHOX2a(2)--------->ANAC58 ---->ARR11(3)        <---------TOE2(3)      ------->TEIL    <---------ZAT6 --------->ZAT2         <- ----GLK1(1)        ---------->DOF2       <---------YAB1  --------->CCA1(2) <---------ZAT2         --   tcttttcggcgaaaattgatgacaaaggataagagactcttgttatgaacataaaataagatagagataaaacgatctagctggacaggttacgaaaatg  20034100               ----------->GT1               <----------ID1             ---------->DOF2       ---------->DOF2 --------->ARR11(3) <---------ARR11(3)                                <---------AHL20(2) ---------GLK1(1)                                  --------->AHL20(2)                        <------- -------->GLK1(1)                                 --------->AHL20(2)            <-----------HVH21 ---------RVE1(1)                              --------->AHL20(2)          ---------->DOF2   -------- -------->RVE1(1)                              <---------AHL20(2)   <---------DAG2          <-------- --------ARR11(3)       <---------DAG2     --------->AHL20(2)       <----------DOF2  <---------MYB52(1) ------->ARR11(3)       <----------DOF2    <---------AHL20(2)   <-----------GT1 <-----------TGA1<----   agatatctcaaaagaaaaagaaaaaactttttttgttgaaaacatttaaaaaattaatagtttgttttccctttttcaaaagcgtcagtttgtttttcct  20034200                                                                             <---------YAB1                                                                        --------->YAB1                                                                       --------->ICU4                                                                       <---------YAB1                --------->ANAC55(2)                           <---------ALFIN1      --------->TOE2(3)                                       --------->REM1(1)     <---------ICU4                                         ----------->RAV1(1) ----GT1       <---------TOE2(3)                         --------->ANAC58  <---------ICU4   <-------- -->ID1   <---------YAB1--------------->AtSPL8           --------->ANAC58 <---------YAB1<---------ZAT18 ---GT1  <---------AHL20(1) --------->SPL7      ---------->DOF2      --------->YAB1---------->DOF2 ------DOF2   <-----------GT1   <------ZmHOX2a(2)        --------->ANAC46 --------->ICU4--------->ZAT18   ttcttcaacattatttttacgttttctcagtacgatcacatttgtcaatataaagactcaagcaacaccagtgatgatgattatttgaagcgcacaacgt  20034300             --------->YAB1                                     <---------AHL20(1)            --------------->AtSPL8                              --------->AHL20(1)         <---------AHL20(2)                                   <---------AHL20(1)    <---------YAB1                                            <---------AHL20(2)   <---------AHL20(2)                                        --------->YAB1   --------->AHL20(2)                                       <---------YAB1   --------->AHL20(1)                                      --------->AHL20(1)   <---------AHL20(1)                                      --------->AHL20(2)  --------->YAB1                                           <---------AHL20(2)  <---------ICU4                         --------->AtLEC2 --------->YAB1 <---------YAB1                     <---------MYB46(3)   <---------YAB1                           --- --------->ICU4           <---------AHL20(2)     --------->GLK1(2)                   --------->AHL20(2) -ALFIN1--------->AHL20(2)--------->AHL20(2)    <---------GLK1(2)     <---------AHL20(2) ----------->GT1   ctaattataattttatcgtaacttatatataaatatgctggttatgcaaagaatcgttcattataatatttttaaaatggtcttcgataaaatgaaaaat  20034400                                                                                        <------------                                                                                      <---------AHL20(2)                                                                                     <---------AHL20(2)                                                                                <---------AHL20(2)                               ----------->GT1                               <---------ARR11(3)                      ------>ZmHOX2a(2)                                      --------->AHL20(1)                     <------ZmHOX2a(2)                                       --------->ARR11(3)                    <---------ARR11(3)                <---------TOE2(3)      <---------AHL20(1)  ----                    --------->AGP1                    <---------TOE1(3)     <---------AHL20(2) ------                    <---------AGP1   <<<<<<<<<<<<<<<<<LFY               <---------AHL20(2)   -------- ------>MYB59       --------->ARR11(3)                <---------YAB1    --------->AHL20(2)--------->YAB1   tcggtagcaactatgttcgatagatctattacagagaaaaaacaatggctaattttaagataaatgtgagtgaaataaatatttttttttatttataaag  20034500  Previous    Next  AGI:  At5g49360.1    Description:  BXL1 (BETA-XYLOSIDASE 1); hydrolase, hydrolyzing O-glycosyl compounds. similar to XYL4 (beta-xylosidase 4), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G64570.1); similar to BXL2 (BETA-XYLOSIDASE 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G02640.1); similar to BXL3 (BETA-XYLOSIDASE 3), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G09730.1); similar to alpha-L-arabinofuranosidase / beta-D-xylosidase [Pyrus pyrifolia] (GB:BAD98523.1); similar to beta xylosidase [Fragaria x ananassa] (GB:AAS17751.2); similar to beta-D-xylosidase [Pyrus pyrifolia] Range:  from: 20029105    to: 20033968    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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