Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 ------>NtERF2              --------->ANAC46                                                                    ---              --------->DEAR3(1)                                                                  ---            ------>ZmHOX2a(1)                                                      --------->ANAC58            <---------ATERF1(1)                                              --------->DEAR3(1)   ---       ------->GAMYB                                                       ------>NtERF2 --------->PCF2     ------>MYB46(1)                                                      <---------ALFIN1     ------     -------->P--------->LBD16                                            --------->ANAC46     <-----     ------>MYB83                             <---------MYB52(1)   <-----------HVH21    <-----------HVH21    ------>MYB83                             <-------GAMYB      ----------->RAV1(2)--------->ANAC46    <---------ALFIN1                         --------->At5g28300=============================RAV-----    ------>MYB46(1)                         ----------->GT1     --------->ZAT2     <---------ALFIN1  --------->MYB46(3)                      --------->LBD16     <---------ALFIN1------>NtERF2   <------  <---------MYB59                         ------>NtERF2       --------->AtMYB61    --------->ANAC58-- --------->ANAC58    --------->DAG2      --------->ANAC46     --------->DEAR3(1) ----------->RAV1(1) --------->ANAC46   ---------->DOF2      --------->DEAR3(1)  --------->MYB46(3)  <---------ALFIN1---- --------->ANAC58  ---------->DOF2      --------->SPL7     --------->AtMYB61--------->ATERF1(1)------ ---->RAV1(1)<---------LBD16      <-----------HVH21      --------->SPL7   --------->DEAR3(1)<-------- --ALFIN1  <---------ALFIN1    ----------->RAV1(2)   --------------->AtSPL8<---------ATERF1(1)-------   agtacccaaccctcctccgccaaaaggcccaaaacctgtccctccgccgttaaatccagtaccaccacctgtccctccgcctcccacaccagtcccacca  20027900                                                      --------->ATERF1(1)                                                     ------>NtERF2                                                  <---------ATERF1(1)                                                 <---------ALFIN1                                        --------->MYB46(3)   --------->ANAC58         ----------->RAV1(2)           --------->ANAC46    ----------->RAV1(1) ---->GAMYB                         --------->At4g35610    <---------ALFIN1 ------>DREB2C(2)                   --------->ZAT2------>ZmHOX2a(1)--------->PCF2 ------>DEAR3(1)         --------->AtMYB61  <---------ATHB12 --------->ANAC58 --->AtMYB61            --------->MYB46(3) <---------ARR14(2)--------->ANAC46                       - ----ALFIN1------>ZmHOX2a(1)       --------->ANAC58 --------->DEAR3(1)                              < ---->ABI4(1)         --------->ANAC46 --------->ANAC58 ------>NtERF2                             --- ---MYB55(2)          <---------ALFIN1 --------->ANAC58--------->DEAR3(1)<---------ALFIN1------>ZmHOX2a(1) ---->NtERF2        ------>ZmHOX2a(1)<---------ALFIN1<---------ATERF1(1) --------->AtMYB61     ------ ----->DEAR4(2)  ------>ZmHOX2a(1) --------->ANAC58 --------->ANAC46    --------->MYB46(3)<---------At4g35610 --->DEAR3(1)   <---------ALFIN1  --------->AtMYB61 <---------ALFIN1  <---------ALFIN1 ----------->RAV1(2) -ALFIN1------>ZmHOX2a(1)<---------ALFIN1  --------->ARR14(2)<---------ALFIN1  <---------MYB59<------ -->MYB46(3)<---------At4g35610 ------>NtERF2  ------>ZmHOX2a(1)  <-----------HVH21   ------>ZmHOX2a(1)   ccgcctaatcctcctgctcctcctccaccactgccaccagcacccaatcctcctccgcctcccacaccagtcccaccactgcctaatcctcctgctcctc  20028000                                                                                             --------                                                                                          <---------ALFIN1                                                                                         --------->ATERF1(1)                                                                                        <---------RAP2.6(3)                                                                                        <---------ATERF1(1)                                                                                       --------->bZIP60(1)                                                                                       --------->DEAR3(1)                                                                                       >>>>>>>>>AtERF-4                                                                        --------->DEAR3(1)--------->DEAR3(1)                                                                        --------->DREB2C(2)------>NtERF2                                                                        --------->ANAC46------>NtERF2                               ------>NtERF2                            --------->RAP2.6(2)<---------ATERF1(1)                            ------>ZmHOX2a(1)            --------->ANAC58              --------->RAP2.3(3)                           <---------ALFIN1              <---------ALFIN1              >>>>>>>>>AtERF-3                  --------->MYB46(3)                     --------->ANAC58              <---------bZIP60(1)                 --------->ANAC58                      <---------ALFIN1 ------->GAMYB  --------->RAP2.3(2)              --------->ZAT2<---------ATERF1(1)        ----------->RAV1(1)    <---------ARR14(2)              --------->At4g35610                   ------>NtERF2      --------->MYB46(3)<------NtERF2             --------->ANAC58 --------->DEAR3(1)   --------->DEAR3(1)--------->AtMYB61 <---------ATERF1(2)             --------->ANAC58 --------->ANAC46    --------->ATERF1(1)--------->DEAR3(1)--------->RAP2.6(2)   --------->AtMYB61  <---------ATHB12           ------>NtERF2 --------->PCF2 --------->ARR14(2)   <---------ALFIN1  <---------ARR14(2)          <---------ATERF1(1) <---------ALFIN1<---------ATERF1(1)  --------->MYB46(3) --------->ARR14(2)  <-----------HVH21    <-----------HVH21     --------->ALFIN1 -------->ANAC46 --------->ANAC58     ----------->RAV1(2)--------->ANAC46------>NtERF2--------->RAP2.3(1) ---------ALFIN1 --------->ANAC46     =============================RAV--------->ABI4(1)--------->ATERF1(2) --->ZmHOX2a(1)<---------ALFIN1--------->LBD16  <---------ALFIN1    <---------MYB55(2)--------->ERF1 >ZmHOX2a(1)--------->AtMYB61<---------LBD16    --------->DEAR3(1)  --------->MYB46(3)--------->ORA47(2) ---ALFIN1------>NtERF2  ------>ZmHOX2a(1)      --------->ANAC46  <---------ALFIN1------>ZmHOX2a(1)--   ctccaccactgccaccagcacccaatcctcctccgccaaaacctgtccctccgcctcccacaccagtcccaccaccgccaaatcctgtgccgccacctcc  20028100                   ------>MYB83                   ------>MYB46(1)                   -------->P                  ------>ZmHOX2a(1)                --------->TOE1(1)             <---------At4g35610                                                             --------           --------->REM1(1)                                                        ------->GAMYB         <-----------HVH21                                                        -------->P <-------        --------->AtMYB61                                                         --------->ANAC58     <---------ALFIN1                                                             --------->ANAC58   ------>ZmHOX2a(1)                                        <---------ICU4    --------->ANAC58 ->AtMYB61 <---------ALFIN1                         <---------ANAC46 --------->TOE2(3)---------->DOF2 ------->ARR14(2)<---------MYB111(2)       <---------YAB1  --------->ICU4     --------->ANAC58   aattcctccaccttcacctcctacctctgaatcgtcttcttcactataagtgttccctgtaatattgacattcttaaatgaagcaacccaaagcctgcag  20028200                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                        ------>ZmHOX2a(2)                                                                                        <---------LBD16                                                                                       --------->ARR14(1)                                                                                       --------->CCA1(2)              <---------ANAC55(1)                                                      <------ZmHOX2a(2)              <---------ANAC46                ----------->GT1                         --------->ARR14(2)              <---------ANAC58         <---------LBD16                                --------->ARR11(3)              <---------ANAC58        <-----------------AGL1          <<<<<<<<<<<<<<<<<LFY   --------     >>>>>>>>>MYB98                  <---------ARR14(2)            ----------->GT1    <---------ARR14(2)  <---------MYB52(2)               ------->GAMYB                  --------->DAG2      --------->AGP1< --------->ANAC55(1)              --------->MYB46(3)             ---------->DOF2     <---------GLK1(1) --------->ANAC58               ----------->RAV1(1)         ----------->GT1          --------->GLK1(1) --------->ANAC58               --------->MYB52(1)        ====================================HOX2a_HOX2a --------->ANAC46       <---------AHL20(2)   ------------------------>ANAC81        ----------->ARR10 ->ZAT14     <-------TEIL      --------->MYB46(3)         <------ZmHOX2a(1) --------->YAB1--------->LBD16 --ZAT14 <-------TEIL  --------->AHL20(2)  ---------->DOF2=====================================HOX2a_HOX2a   tacaagtaacatacatgcgtgtgtattaaatgaacaacagacctggaaaggaaactaagaggaagaaaaaagtgacaatggtgactgagatccggagctc  20028300                                                                             --------->LBD16                                                                            <---------HSFC1(1)                                                                            --------->HSFB2a(2)                                                                    --------->ANAC55(2)                                                                    <---------ANAC55(1)                                                                    <---------ANAC58                                                                    <---------ANAC55(2)                                                                    <------MYB46(1)                                                                    <------MYB83                                                                    <---------ANAC58                                                                    <---------ANAC46       <---------ANAC58                                                                   --------->MYB46(2)      <---------O2                                                                   --------->MYB111(2)     --------->O2                                                                   --------->MYB52(2)      <---------ANAC58 ->GLK1(1)                                                         --------->MYB59         --------->TGA1a --GLK1(1)                                                         --------->MYB111(1)     <---------ANAC55(1) --ZAT2     --------->ANAC58                                      <---------MYB55(1)       <---------ANAC46 ->At4g35610--------->ANAC58                    ------>ZmHOX2a(1)<---------MYB52(1)        <---------TGA1a --At4g35610--------->ANAC46           ----------->GT1     <---------YAB1   --------->HSFC1(1) ->ZAT2--------->YAB1           --------------->AGL15   --------->AHL20(2)  <---------HSFB2a(2) -------GAMYB            *TSS   <---------------AGL15   <---------AHL20(2) <---------LBD16 <---------ANAC55(2)   tctgttgaatgaaaacgccattgctaagagtttacaagaattagtaaatccttcttatataattcttgttaggtgtttctggaaaatttcaagacgtgtg  20028400                                                                             <---------DAG2                                                                          <---------ALFIN1                                                                         --------->MYB46(3)                                                                         <---------MYB55(2)                                                                         <---------MYB111(2)                                                                        -------->P                                                                        ------>MYB83                                                                        ------>MYB46(1)                                                                      <---------MYB46(2)                                                                      <---------MYB111(1)                                                                      --------->AtMYB61             <                                                                      --------->DEAR3(1)          ===                --------->MYB59                                       --------->MYB46(3)          <--                <---------TOE2(3)                                     <---------MYB111(2)         ---                <---------TOE1(3)                          ---------->DOF2------->GAMYB         <----  --------->ANAC58                                     <---------ANAC46--------->MYB55(1)   <--------  --------->ANAC58                                 --------->At4g35610<---------MYB55(2) <-----------GT1   atgcaagtaagtagaatttaggttttttgtatatatacagagaagtttgtagcagttgagtaaaagtcatcaccaaccaccttctgtgtttttactttgc  20028500                                                                                            ---------                --------->ATHB12                                                            --------- --------->AHL20(1)                                                                         --------- --------->ARR11(3)                    <---------------AGL15                           ----------->HVH21 <---------ARR11(3)                    --------------->AGL15                  ------>ZmHOX2a(2) <---------AHL20(1)                   ----------------->AG                   --------->At4g35610 ---------CCA1(2)                     <-----------------AG                  --------->ARR11(3) ======================================================MADS_MADS            <---------ARR11(3)------- -------------AGL15            ------->TEIL           ----------->GT1  --------->DAG2  <---------ETT(1) ------------>AGL15         --------->AtLEC2   <------ZmHOX2a(1)      ---------->DOF2  --------->ANAC58 -----ANAC46    <---------AHL20(2)    ----------------->AGL1       --------->TOE2(3)   --------->ANAC46 --DOF2        --------->AHL20(2)     ----------------->AGL2       --------->TOE1(3)   --------->ANAC58   ctatatattgtaatccatttattgactgccatgaaactaaaccatattaggaagaaaggttaaatcaaacctaaaagtgatctcaagacccgacacgaaa  20028600       <----------DOF2 >ANAC58                               ---------->DOF2 >ANAC58                             <---------ZAT6          ---------->DOF2                    ----- >ANAC46                        <------ZmHOX2a(1)         --------->TOE2(3)                     <---- --->DOF2                ---------->DOF2            <-----------ARR10       >>>>>>>>>>MYB80    <-----   gaaggtgttctttttttgttttatagccaaagaaggatagtgaaagcatttacaaatctaacttaaagacatatttcaaaccaaaaaaaaactaaaatac  20028700           --------->MYB46(3)         <-------TEIL  <----------DOF2         --------->MYB52(1)          --------->CCA1(2)                    --------->HSFB2a(2)         ------>MYB83 <---------bZIP60(1)         ------->TEIL            <---------HSFB2a(2)         ------>MYB46(1)            --------->ARR14(2)               <---------At4g35610       <---------MYB59--------->bZIP60(1)  <---------ATHB12  <---------AHL20(2)              -------- ---->ANAC55(2) --------->DAG2      <---------ARR14(2)    --------->YAB1-------->P <---------ARR11(3) -----ANAC55(2)---------->DOF2  XXXXXXXXXXXXXXXXXXXX>MIR845A--------->AHL20(2)     --------->ARR11(3) --TEIL--------->AtMYB61 <-----------RAV1(2)  --------------->AtSPL8 --------->At4g35610  --------->ANAC46   ataatcaaacctaaccaaaaagtgacctcagaggctcagatacaaatcaatgtactttaaaaataaatctcatctaccagaacaacatcttcacaccatt  20028800  Previous    Next  AGI:  At5g49350.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G56320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44880.1); contains domain PTHR10499 (PTHR10499) Range:  from: 20026967    to: 20028325    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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