Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          ------>NtERF2                                                       --------->ANAC58                                                       --------->ANAC58                                                     <---------ALFIN1                                                  <---------ALFIN1                                                  --------->AtMYB61                                                 --------->MYB46(3)                                               <---------PCF5                                               <------ZmHOX2a(1)                        --------->At4g35610                                           ------>MYB83--------->ANAC46                 <---------At4g35610                                           -------->P--------->AtMYB61         ----------------->AGL3                                          ----------->RAV1(1)                --------->ARR14(2)    --------->YAB1             ------->TEIL------>MYB46(1)             <-----------GT1<---------ICU4 ----->LBD16     <---------TOE2(3)        --------->MYB52(1)     <------ZmHOX2a(1)    --------->YAB1 ----GT1         <---------TOE1(3)       --------->AtMYB61 ---------->DOF2   <---------TCP20   ccaaaatcagagtgaaattagggtttatgtatgaacctttggaccaacaggaccaccacgccaaagaggagttttactggttccacaatcagcacaagtc  20002500                                             <---------At4g35610                                             --------->At4g35610                                      <---------ARR11(1)                                      --------->ARR11(3)                   <---------ZAT6     <---------ARR11(3)                   <-----------RAV1(1)--------->ARR14(2)             --------->ZAT6           <---------ARR14(2)                      --------->YAB1           <---------DOF5.7(2)       <---------CCA1(2)                   --------->MYB46(3)         --------->DOF5.7(2)       --------->YAB1                      --------->WOX13(1)          --      ---------->ID1              <------ZmHOX2a(2)     <---------AtLEC2-------->P       <---------MYB52(2)   ttcttcttgtcgttaacactagtgttgttctgttcgatcatatcttcagctcttgttttcatggtttctgaatcaaccaataagacctgaaacaaacaca  20002600                      <------ZmHOX2a(2)                                <---------ICU4                     --------->ARR11(3)                               --------->ICU4                     <---------ARR11(3)                               <---------YAB1              --------->ICU4                                 --------->ANAC58 <----------DOF2         --------->At4g35610             --------->AHL20(2)  --------->ANAC58<---------DAG2         <         <---------At4g35610          --------->YAB1  --------->At4g35610 <-----------GT1  ------>ZmHOX2a(2)      <------ZmHOX2a(2)       <-----------TGA1     <------ZmHOX2a(2)<---------ICU4       --------->ARR11(3) -------->DOF2<---------YAB1 --------->ETT(2)    <---------GLK1(1) <---------ATHB12<---------At5g28300   gaagagcgatcagcttattattagatcatcgtcgtcagaatcaaaaaatagagatcagaagagaagcaaatcatttttaccttttcactgtgatctagca  20002700                                                             --------->LBD16                                                            --------->HSFB2a(2)                                                            <---------HSFB2a(2)                                                           <---------LBD16                                                           ------>ZmHOX2a(2)                                                           ===============================HOX2a_HOX2a                                                          ================================HOX2a_HOX2a                                                          <------ZmHOX2a(2)                                                         --------->ARR14(2)                                                         <---------ARR14(2)                                                      ------>NtERF2                                                      --------->LBD16                                                      <------NtERF2                                                     --------->RRTF1(3)                                                     --------->DEAR3(1)                                                    --------->ORA47(2)                                                    <------NtERF2                                                    --------->ATERF1(1)                                                    --------->ERF1                                                   <---------ERF1                                                   ------>NtERF2                                                   <---------RAP2.3(1)                                                   <---------ATERF1(1)                                                   <---------DEAR4(2)                                      <-------GAMYB<---------RAP2.6(1)                                     <---------MYB46(3)----------->HVH21              --------->YAB1                                    <---------AtMYB61--------->RAP2.3(2)             <------ZmHOX2a(2)                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               <------ZmHOX2a(1)         --------->TOE2(3)       <---------ARR14(2)<---------RRTF1(1)       --------->ANAC58        ------>ZmHOX2a(2)       =================================HOX2a_HOX2a<---------TOE2(3)        ----------->GT1         <------ZmHOX2a(1) <---------RAP2.3(2)       --------->ANAC58        ===============================HOX2a_HOX2a<---------DEAR3(1)     =================HOX2a_HOX2a      --------->ARR11(3)        ==================================HOX2a_HOX2a  ---------->DOF2      <---------ARR11(3)      <---------TOE2(3)   <---------RAP2.3(3)    <------ZmHOX2a(2)        ---  <---------MYB52(1)     <----------DOF2          <---------RRTF1(3)    --------->ARR11(3)   -------- ---------YAB1         ------->TEIL --------->ALFIN1--------->RAP2.3(1)--------->GLK1(1)  --------->GLK1(2)   ttctgttagatcgtcaattgaaatggacttttgaggatgtggttgaagtttggcgccgcgatcgggaaaacagagatcaaggaaaggatcagaatcaatc  20002800                                                  <------ZmHOX2a(1)                                    --------->ARR14(2)                                    <---------ARR14(2)                          <-----------ARR10      <---------ZAT18                       <---------ANAC55(2)     --------->At4g35610                    <------ZmHOX2a(2)          <---------At4g35610                    =====================================HOX2a_HOX2a      <---------TOE2(3)--------->ANAC55(2) --------->AtLEC2                   <------NtERF2 -------->GT1      --------->ARR11(3)     ------->MYC3          <---------ZAT14    <------ZmHOX2a(1) ->WOX13(1)        <---------ARR11(3)     <-------MYC3      --------->DAG2<-----------HVH21       ---   tggttactagggtttagagaagatcacgtttcttcgcaaattcacatgcagaggacttggaaagagtgaagaagagtgtcagcgaggaagagagggtttt  20002900                                                   <---------AHL20(2)                                                   --------->AHL20(2)                          ------>ZmHOX2a(2)       <---------YAB1                       --------->AHL20(2)                       *TSS               --------->ANAC58                       <------MYB83                       --------->YAB1     --------->ANAC46                       <------MYB46(1)           ----------->RAV1(1)            --------->ANAC58                      --------->MYB59          ----------->HVH21             ------>MYB46(1)                      <---------ARR14(2)          --------->DREB2C(2)           ------>MYB83                         --------->ARR14(2)  ----         --------->MYB46(3)            --------->MYB55(1)                   <------ZmHOX2a(1)    <---         --------->DEAR3(2) ---------->DOF2     --------->YAB1      <-----------GT1    <---------AHL20(2)      <---------SPL7  <---------ATHB12--------->AtMYB61           --------->AHL20(2) <----------DOF2 ------->DOF2        ------------------------>ANAC81 <------------CBF   --------->TOE1(2)  ----------   caaagggtcgaaccgacagagacaatgatccaaagaaaaaccaaacgcgattataaattggttcagaattaaaccctaggatttggtctttaaatgacga  20003000                                        >>>>>>>>>E2Fd                                        >>>>>>>>>E2Fc                                       --------->LBD16                                      --------->ANAC46                                      --------->ANAC58                                      --------->ANAC58                                     <---------MYB55(2)                                    <---------ALFIN1                                   ------>NtERF2                                  --------->DEAR3(1)                               --------->ANAC58                               --------->ANAC46                          --------->At4g35610     <----------DOF2    --------->YAB1------->GAMYB                                          <------MYB46(1) ----->ARR14(2)        <---------YAB1--------->MYB46(3)                                      <------MYB83 ------ARR14(2)  ----------------->AGL3------>NtERF2         <------ZmHOX2a(1)               -------- ->TGA1       ---------->ID1   --------->ANAC58            <---------TOE2(3)   <----------DOF2    ---   aactgcccttttattcgtccccattatcagaagaagccacccgccaaaatatggaatttttgaggaaaatgtgtattttcgcttattgtctgatttggtg  20003100                  --------->WRKY12                  --------->WRKY38(1)                  --------->WRKY45                <----------DOF2            <------NtERF2           ------>NtERF2                   ---------->DOF2                   --------->ICU4           <---------ATERF1(1)           --------->At5g28300                 <---------YAB1          --------->ANAC58           --------->ARR14(1)                    --------->YAB1          <---------DEAR3(1)         --------->CCA1(2)                    --------->ICU4          --------->ANAC58          --------->ARR11(1)                    <---------YAB1          --------->PCF2            <---------ARR14(2)                  <---------ICU4          --------->RAP2.6(2)       <---------GLK1(2)                   --------->YAB1         --------->ZAT18            --------->ARR14(2)                 <---------ATHB12     --------->DAG2 >>>>>>>>>>>>>>>>>LFY----------->GT1                --------->ICU4    ---------->DOF2<---------WRKY18(1)<-------TEIL --------->MYB59  <---------WRKY12 --->GT1 <---------ZAT18          ----------->ARR10<---------TOE2(3)<---------WRKY38(1)         ----- ------->DOF2<---------ALFIN1   <-----------------AGL1             --------->WRKY18(1)   ------->TEIL   aaaagaaaaagggcgccactttgaccattgtttgatcagatacggtaaagagtaaggtttcttcgaatggtcaatgatgatgattcacatgtatttgatc  20003200                ------>ZmHOX2a(2)               <------ZmHOX2a(2)              <---------ARR11(3)              --------->ARR11(3)                                                            ---------           <---------TOE2(3)                               <---------ARR11(3)               <--------           <---------TOE1(3)                               --------->ARR11(3)             --------->ANAC46          <---------DOF5.7(2)                             <------ZmHOX2a(1)            --------->ZAT18        --------->DOF5.7(2)                             <---------TOE2(3)              --------->ZAT14       --------->TOE2(3)                                <---------TOE1(3)              <---------ZAT14       <-------GAMYB                           --------->REM1(2)                     <---------------AtSPL8      --------->MYB52(2)                     --------->LBD16                         <---------------AtSPL3      <---------MYB46(3)                    <---------ANAC58     <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     --------->SPL7                         <---------ANAC55(1) <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <---------MYB52(1)                      <---------ANAC58    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------SPL7                   <----------DOF2 <----------DOF2                 <---------ANAC58 --------------->AtSPL3     --------->MYB52(1)--------->ALFIN1<---------AHL20(2)    <---------ANAC46 ->ZmHOX2a(2)------->GAMYB  <-----------GT1 <---------ANAC46<---------RVE1(1)       <---------ANAC58   gtagccgttcgttaacgatctctacaaatttaacggttcttttcttccgtgtggatttaaggattttttttttttttttttttttggagtgtacagcact  20003300                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   <-    --------->YAB1                                                                                ---   <---------ATHB12                                                                               <--   <<<<<<<<<ARR2                            <----------DOF2                                   <------   <<<<<<<<<ARR1                  <---------ICU4        <------ZmHOX2a(2)             --------->AHL20(2) --------->WOX13(1)              <---------YAB1        <---------AGP1  --------->ANAC58      <------- >ZAT14 --------->AHL20(2)       --------->ICU4   <---------ANAC46     --------->ANAC58<---------AHL20(2) -ZAT14 <---------AHL20(2)     --------->YAB1   <---------ANAC46 ---------->DOF2      <---------AHL20(2)   agacaatcatataaatctcacagataaaaaatgtcataattcaattctttttgtgtagatcagattgcaaagtaagcaaaatcacaaattttttttatgt  20003400  Previous    Next  AGI:  At5g49300.1    Description:  zinc finger (GATA type) family protein. Identical to Putative GATA transcription factor 23 [Arabidopsis Thaliana] (GB:Q9FJ10); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT3G06740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44870.1); contains InterPro domain Zinc finger, NHR/GATA-type; (InterPro:IPR013088); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) Range:  from: 20002075    to: 20002923    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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