Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   <---------YAB1 ----->ZmHOX2a(2) --------GLK1(1) ------->GLK1(1) -----ZmHOX2a(2)                                                                                   -- -------AGP1                                                                                 -------- ------>ARR11(3)                                                                             -------- ---------ARR10                <---------ANAC58                   --------->ARR11(3)       --------->ARR11(3) -------ARR11(3)               <---------ANAC58                  --------->CCA1(1)         <---------ARR11(3) ------>GLK1(2)                <---------ANAC46              --------->AHL20(2)            --------->GLK1(2) ------>ARR14(2)          <---------ICU4                 --------->YAB1   <----------DOF2 --------->RVE1(1) -------ARR14(2)     --------->ANAC46              <-----------GT1<---------ARR11(3)   --------->YAB1 ---ZmHOX2a(1)      ------->GAMYB              <----------DOF2   --------->RVE1(1)    --------->AHL20(2)   gatctcattgttaagttgttaaccctcaacatttcgtctaaaaatcagacttttttctatcaaaaaaatatctatactttgtagtcaaataaaaatctta  19949100                              <---------WOX13(1)                            <---------WRKY18(1)                                       --------->TOE1(3)                           --------->WRKY12                                           --------->TOE2(3)                           --------->WRKY38(1)                                      <---------ARR11(3)                         <-------GAMYB                                              --------->GLK1(2)                        <---------MYB46(3)--------->CCA1(2)                         --------->ARR11(3)     --------->YAB1 --------->WRKY38(1)  <---------ARR11(3)               <---------ARR14(2)   --------->AHL20(2)  >>>>>>>>>>>>WRKY18--------->AHL20(1)       ----------->GT1  --------->RVE1(1) ------->YAB1     <----------DOF2        --------->ARR11(3)   <---------ZAT6 ----------->GT1        - ->TOE2(3)    <---------ARR14(2)       ----------->ARR10 --------->TOE2(3)--------->GLK1(2)      <--- ->YAB1       --------->ARR14(2)     ---------->DOF2    <---------ICU4    --------->ARR14(2)    <----   atcaaaataatactcgtatactttgactgttgactgatggaaagatattagaatataaacattagagatagaaacaaatctgtaaaaatcttaaaattag  19949200             <----------TaMYB80             <---------HSFC1(2)             --------->HSFC1(2)             <---------KAN4(1)             --------->KAN4(1)             --------->HSFB2a(1)             <---------HSFB2a(1)            <---------KAN4(2)                      <---------------AGL15                 <-----------GT1        --------->ANAC58                           --------------->AGL15            <----------DOF2        --------->ANAC55(1)                       ----------------->AGL2            <---------DAG2        --------->ANAC55(2)                       <-----------------AGL2          <------NtERF2        <---------ANAC55(2)      --------->ATHB12 <-----------------AGL3        --------->ATERF1(1)        --------->ANAC58         -------->ATHB1   ----------------->AGL3        <---------DEAR3(1)        --------->ANAC46    --------->AHL20(2)    ----------------->AGL1        <------NtERF2       <---------LBD16   ----------->GT1        --------->ANAC58                <---------RAP2.6(2)    <---------AHL20(2)---------->DOF2    --------->YAB1  <---------TOE2(3)     <---------LBD16 -------->AHL20(2) --------->LBD16       ----------->GT1 <---------YAB1        ------>NtERF2      <-- ---ZmHOX2a(1)--------->KAN4(2)  <---------ICU4 --------->ANAC58              --------->ALFIN1    <-- -----YAB1  ---------->TaMYB80  <---------YAB1---------->DOF2             <-----------RAV1(2)   <----   gattatttatacggaatattccccaaaagataaaatcattgaatcataaaaagccatttatggtagccctaaatattcaggcgcggctttttttcttatt  19949300                                      <---------LBD16                                      --------->LBD16                                      ------>NtERF2                            <-----------GT1                                     <---------ANAC58                         <-----------GT1                           <---------ANAC46                          <----------DOF2<---------ALFIN1        --------->AHL20(2)<------NtERF2    <------NtERF2      --------->O2 <---------ICU4 -------ANAC58           <---------ZAT18 -------------->OsCBT <---------O2 --------->YAB1 -------ANAC58--------->DAG2         <---------ANAC58   ------>ZmHOX2a(1) <---------YAB1            < -------GT1  ---------->DOF2 <---------MYB52(1)        <---------ALFIN1--------->AHL20(2)         <--   tcgttttcattttaaaaaagtttttagcgccgtttattgccgcgcgtcgttttcgctcctcgtctcgtctccttttattattaccccctctctctctctc  19949400                                                                             --------->HSFB2a(2)                     --------->ZAT14                                    --------->HSFB2a(1)         <                     <---------ZAT14                         <---------TOE1(3)      <---------GLK1(1)       ------>ZmHOX2a(1)    <----------DOF2             *TSS <---------TOE2(3)     --------->ARR11(3) ---------ALFIN1   --------->bZIP60(2)                  --------->WOX13(1)   <---------HSFB2a(2)  --- -------ALFIN1     --------->ANAC46                   ------------>CBF  <---------HSFB2a(1)      ----   ccactcttcctctcaaatcacacatcactgctttcttcaacctctctatctctcagaccaattagggtttcgcaatcttccagtagatttcgcttctcaa  19949500                                                                                        <---------AHL20(2)                                                                                       --------->ICU4                                                                                       <---------YAB1                                                                                    <---------YAB1<--                                               ----------->GT1             ------>ZmHOX2a(1)      <--      <-----------GT1                         <---------WOX13(1)           --------->LBD16    <------ ---------TOE2(2)                           --------->ATHB12              <---------LBD16     <------ ------>TOE2(3)                        <---------ZAT14                   ----------->RAV1(2)  <------ ----->ANAC46  --------->GLK1(2)       --------->ZAT14        <---------LBD16   <----------DOF2  <---   cgtaagtttttctctataatctgtgtcgatttcagtctaactacagtgattgttaaaccctagactcggaaattttcctgggctttgttattatttgcgt  19949600                                                                                 --------->ARR11(3)      <---------WRKY38(1)                                                      <---------YAB1 -------MYB46(3)                                                               --------->ICU4    <--- -------DEAR3(2)     <---------DOF5.7(2)                            <---------ANAC46     <------MYB83 ---ANAC46          <---------WRKY38(1)                             <---------ANAC58     ----------->GT1 ---ANAC58          --------->ZAT14                   <---------AHL20(2)     --------->YAB1   ------- ---ANAC58    <---------REM1(1)                      --------->AHL20(2)   --------->YAB1 <------MYB46(1) ------DEAR3(1)     <---------ZAT18         <---------ANAC46        <---------ANAC58 <-----------RAV1(1)   cggtttagtcaatgcgatgtagtgaacgcttcgattacatagatttgtgtgaaaattttatagtccaattgcgttatagtgatgattttgttggtaattt  19949700                                                                               <-------TEIL                                             --------->TOE1(2)                --------->GLK1(2)    --                                            <---------At4g35610               --------->CCA1(2)    --                                            <---------ZAT2               --------->LBD16         ----                                            --------->At4g35610         --------->HSFB2a(2)   <------ ------YAB1                       --------->ALFIN1     ---------->DOF2  <---------HSFB2a(2)  <------- -->ICU4                 ----------->GT1 ---------->DOF2          <---------ALFIN1           --------   tgattttgaaactagggattttgaaaatggtggaaaatggggctaaagctgcgaagcgaaagaagagaccacttccagagattcaagaggtagaagatgt  19949800                             <---------ANAC58                             <---------ANAC58                         --------->At4g35610                         <---------ZAT14     <---------TOE1(1)   <---------At4g35610     <---------TOE2(1)--------->At4g35610    <---------------------WRI1 --------->ALFIN1   <------ZmHOX2a(1)  --------->ZAT2 --------->TOE1(1)    <---------At4g35610 ------->TOE2(2)      <---------ZAT2 ------->TOE1(2)     --------->ALFIN1                                           <---------YAB1 --->TEIL<------ZmHOX2a(1)   <---------ANAC46                           <---------ARR14(2) ---REM1(1)        <---------ANAC58                                     --------->ARR14(2)         -- --ARR11(3)        <---------ANAC46                                    <---------GLK1(1)           <- ->ARR11(3)        <---------ANAC58               --------->GLK1(1)    --------->GLK1(1)  ---------->DOF2   acctaggacgaggagaccaaggcgtgctgcagcgtgtaccagtttcaaggagaaatctattcgagtctgtgagaaatctgctactattgaagtaaagaaa  19949900                                           <---------HSFB2a(2)                                        --------->ARR14(2)                                        <---------ARR14(2)                                    <-----------------AGL1                <------ZmHOX2a(1)                                   <---------DOF5.7(2)                 <-----------RAV1(2)                                   --------->MYB52(1)                -------->P                                  <---------WRKY38(1)                ------>MYB83                                  <---------WRKY12             ------>ZmHOX2a(2)                                 --------->DOF5.7(2)           ==================HOX2a_HOX2a                                --------->At5g28300           <------ZmHOX2a(2)                                <-------GAMYB                --------->ARR14(2)                              <---------TOE1(3)              <---------ARR14(2)            <------ZmHOX2a(1) <---------TOE2(3)              --------->ARR11(3)   <---------ARR14(2)         <---------ANAC46               <---------ARR11(3)   --------->ARR14(2)       --------->MYB52(1)               --------->ARR14(3)      --------->ARR11(3)   <---------GLK1(2)       ----------->HVH21        <---------TOE2(3)------>MYB46(1)--------->ATHB12 ------->At4g35610         <---------SPL7  --------->HSFB2a(2)===================HOX2a_HOX2a --------At4g35610        <----------DOF2 <---------LBD16    <---------ARR14(3)   <---------WOX13(1)   cagcagattgtggaggaagagtttctcgcgttacggttaacggctctggaaactgatgttgaagatcgtccaaccaggagactgaatgattttgttttgt  19950000  Previous    Next  AGI:  At5g49160.1    Description:  MET1 (DECREASED METHYLATION 2DNA). Identical to DNA (ATHIM) [Arabidopsis Thaliana] (GB:P34881); similar to MET2 (DNA METHYLTRANSFERASE 2), DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana] (TAIR:AT4G14140.1); similar to DNA (cytosine-5-)-methyltransferase, putative [Arabidopsis thaliana] (TAIR:AT4G08990.1); similar to MEE57 (maternal effect embryo arrest 57), DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana] (TAIR:AT4G13610.1); similar to DNA methyltransferase 1a [Brassica rapa] (GB:BAF34635.1); similar to DNA methyltransferase 1b [Brassica rapa] (GB:BAF34636.1); similar to DNA cytosine-5-methyltransferase [Prunus persica] Range:  from: 19949456    to: 19955595    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version