Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <---------TOE1(2)                                                                                        <---------TOE2(2)                                                                                      <---------SPL7                                                                                    <------NtERF2                                                                                  --------->DEAR3(1)                                                                                 --------->RAP2.3(1)                                                                                 <------NtERF2                                                                                 --------->ATERF1(1)                                                                                ------>NtERF2                                                                                <---------RAP2.3(1)                                                                                <---------ATERF1(1)                                                                               <---------DEAR3(1)                                     --------->WOX13(1)                        --------->DEAR3(1)                               --------->ANAC58                               --------->ATERF1(1)                               --------->ANAC58                             ------->GAMYB                         --------->LBD16                                    --------->DEAR3(1)                         ------>NtERF2          ------->MYC3            --------->MYB46(3)<------ZmHOX2a(1)          ----------->RAV1(1)--------->At4g35610------->MYC2         <---------ICU4------>NtERF2 ---HSFB2a(2)            ----------->RAV1(1)    <-------MYC2         --------->YAB1<-----------HVH21 -->HSFB2a(2)          <---------LBD16      <---------ZAT18   --------->LBD16<-----------HVH21 -->ANAC55(2)       --------->At4g35610 --------->YAB1        ------>NtERF2--------->MYB46(3) ---ANAC55(2)       <---------At4g35610<---------ATHB12  <-----------HVH21 --------->DEAR3(2) ------- ---GT1  --------->AtMYB61   <---------At4g35610<-------MYC3<---------LBD16<------------AtMYB77   aacgagaaacaccaccagagatagctccggcagaagcatcaatcagagcacgtttaatctgtcccggctcatcatcaaccgtcgccgtcgtaggaatcat  19876600                                                                     --------->YAB1                                                                   <---------AHL20(1)                                                                   --------->AHL20(1)       ---------                                                 --------->HSFB2a(2)<---------YAB1 <---------------AGL15                                          --------->DAG2           --------->AHL20(2)      <------ZmHOX2a(1)                                     --------->AHL20(2)       <---------YAB1       ==================                                     --------->YAB1          --------->TOE2(3)    --------->YAB1                                  --------->WOX13(1)        --------->YAB1  --------->TOE1(3) -------                         ----------->GT1 ---------->DOF2   <---------ATHB12 --------->TOE2(3) ------- -->YAB1                 --------->At4g35610     <---------HSFB2a(2)<---------AHL20(2)   <---------TOE2(3)   atttttctagggtttttggtctctataagctaaaatcaattaaaaaagtttccaaaaccctatcatcaatataataaacctcaaacaaaataaggaaaga  19876700                                                          --------->DAG2                                                    --------------->AGL15                         ---                                                    <---------------AGL15                        ----                   --------->AHL20(2)              ----------------->AGL3      <---------DDF1    <---                   <---------AHL20(2)            <-----------GT1       ---------->DOF2          <----              --------->MYB46(3)            <----------DOF2         --------->ANAC58         <------- ->DOF2  --------->ANAC46                --------->ARR11(3)         --------->ANAC58         -------- ===================================================================MADS_MADS <---------ETT(2)  <---- -->ANAC58  ----------->RAV1(1)          <---------ARR11(3)  <----------ID1   --------->ETT(2) <----- -->ANAC58 <----------ID1               --------->GLK1(1)---------->DOF2--------->DAG2       --------   aactaaattcaaggcaacaaataaaatcaaaaacgaaaactgaaatcttttttaccagataaagcgagaaacgaaaagggtcgacattgatggagtttcc  19876800         --------->ANAC58         --------->ANAC58     --------->ANAC58                                    <------MYB46(1)     --------->ANAC58                      --------->LBD16    --------->DAG2                        <------NtERF2  <------MYB83   ---------->DOF2                       --------->LBD16 <---------ANAC58 ------>LBD16                            <---------At4g35610 ----->LBD16                             <---------LBD16 <---------ANAC46 ------LBD16                             ------>NtERF2   <---------ANAC58 -----LBD16                --------->TOE1(3) <---------ARR14(2)          --------->ATHB12 --ARR14(2)                --------->TOE2(3) --------->ARR14(2)         --------->ICU4 ->ARR14(2)           ----------->HVH21 <---------ANAC46<---------MYB46(3) -----ANAC46        --------->At4g35610<---------LBD16  --------->MYB55(2)                  <-------- ----LBD16          <---------At4g35610<---------RAP2.6(2) --------->ALFIN1      <---------LBD16 ->GLK1(2)     <----------DOF2  <---------TOE2(3)       --------->MYB111(2)  ----------->HVH21 <-----   ggggaaaaagcaaggaactttgagatgacccttaaacgtttgccgcggatttgagagttgggtggagattgaaaatgatttgactcggaaaaagattata  19876900                                      <---------ANAC58                                    <----------DOF2                                <---------DOF5.7(2)                                       <---------DAG2                               <---------WRKY38(1)                                       *TSS    <---                               <---------WRKY12                                         -------------                  <---------GLK1(2)   <---------ANAC58                 <----------DOF2  -------------          --------->ZAT2      --------->DOF5.7(2)                     <---------ANAC58  <------------          <---------At4g35610<-----------HVH21                        <---------ANAC58  <------------    ---------->DOF2--------->GLK1(2) <-------TEIL                --------->ZAT2        ---------->ID1 -YAB1    --------->At4g35610--------->LBD16                     <---------At4g35610   -------------- ----YAB1--------->GLK1(2)  --------->ANAC46                  ---------->DOF2        <-----------GT1   aaaaaaaaaagaagctgagagattctttctccgtcaacgttcgtgttctctccgatagagagattaaagctggctttcttacaaaatttgccctttttag  19877000                  <---------TOE2(3)       <---------MYB46(3)                                                                           <       <---------DEAR3(2)                                                                           -      --------->ETT(1)                           <------------CBF                                   -      <---------DEAR3(1)                       --------->AHL20(1)                                   <      <---------DREB2C(2)                      --------->AHL20(2)                                 <-- ---ZmHOX2a(1)<----------DOF2                  <---------AHL20(2)    <---------YAB1             <---- -->AGL15   <------MYB83                      --------->AHL20(2)     <---------TOE2(3)          <---- ---->AGL1  ----------->GT1                   <---------AHL20(2)     <---------TOE1(3)       <------- -----AGL1  <------MYB46(1)             ----------->GT1          <----------DOF2            <-------- ---AGL15  --------->MYB59------------>CBF--------->AHL20(2)  ----------->GT1               <-------- --->AGL2<---------MYB52(1)           ---------->DOF2    ---------->DOF2                   --------->TOE2(3)   gactcttgtcggttcggtttaatgaagtatcaattcgtcttaaagtaattaaattgtttcaaaggggttttatggttactcttaaaccttcttcctttac  19877100     <---------AtLEC2    <---------MYB46(3) <-------GAMYB -----------RAV1(1) -------->MYB55(2) -------->MYB52(2) ---------MYB46(3)                                                               <---------ARR11(3) -------MYB52(1)                           --------->GLK1(1)                     --------->AHL20(1) -----ANAC58                            ------->GAMYB                            --------->ARR11(3) -----ANAC58                         ----------->RAV1(1)                         <---------AHL20(2) --MYB52(1)                        <------ZmHOX2a(2)           <-----------GT1   --------->AHL20(2) -DAG2                            --------->ARR11(3)    ----------->GT1          <---------AHL20(1)<- --DOF2                           <---------ARR11(3)  ---------->DOF2------>ZmHOX2a(1)           <---   gtttgttggatggatttagtcatttactaatttgaagatcaacagagacccttacaaaaagaaaattactccttatgttccaatatattagatgttttct  19877200                           <---------TOE2(3)                           ----------->GT1                      <---------YAB1                     --------->AHL20(2)                     <---------AHL20(2)                     --------->AHL20(1)                     <---------AHL20(1)                    <---------------AGL15                                <---------ICU4                    --------->YAB1                                      --------->ICU4                    --------->AHL20(2)                                  <---------YAB1                   <---------YAB1               <---------AHL20(2)   <---------YAB1                --------->AHL20(1)          <---------AHL20(2)     ----------->GT1                <---------AHL20(2)      <---------ANAC46       --------->ARR11(3) ---------DOF2  <---------AHL20(1)      <---------ANAC55(2)<---------AHL20(2)                     <-- ------At4g35610--------->AHL20(2)      <---------YAB1    --------->AHL20(2)<-----------GT1    <-----   gctttcttcttgtttcattttattatattaagaaaaaacattatgtataatttatgcatatttaatatgttgtgattatttctattctgcaatctttttt  19877300                                  <---------CCA1(1)                           <---------AHL20(1)                                  <---------RVE1(1)                           <---------AHL20(2)                                 --------->ARR11(3)                           --------->AHL20(1)                               ----------->ARR10                              --------->AHL20(2)                    ---------->DOF2                                        --------->YAB1          <----------DOF2 <-------TEIL                                   --------->AHL20(2)       <-----------GT1<---------TOE2(3)                           ----------->GT1                   - <---------YAB1<---------AHL20(2)<---------GLK1(2)               <---------TOE2(3)                 <- --------DOF2  --------->AHL20(2)<---------ARR11(3)        <-------TEIL  --------->AHL20(1)       <-- ------GT1<---------DAG2 <--------P <---------AHL20(2)--------->AHL20(2)--------->YAB1        <------   cttttgattaaacttttttaaataaaggtagataagatttttttagagaaatacactaaaatacatttatgtaaaaataataaaatagtttcttattttt  19877400          --------->At4g35610          <---------At4g35610   --------->ATHB12   <---------ICU4  <---------YAB1  --------->ICU4                                                                   <-----------HVH21  <---------ATHB12                                                               ------->MYC3 <---------TOE2(3)                                <------MYB46(1)                <-------MYC3 -------->YAB1                                    <------MYB83                  --------->O2 --------AHL20(2)                          --------->YAB1                       <---------O2 -------AHL20(2)                    <---------YAB1----------->GT1     <---------ALFIN1 ---AHL20(2)               ----------->GT1<---------YAB1            ----------->RAV1(1)          ----   tttaatgattttagctaaaacattttcttatgtaaaatatgattttcatagttggtaactcaagtgtttgcaacacatcgacatgtgtcaaatctaattt  19877500  Previous    Next  AGI:  At5g48970.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT3G21390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70975.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 19874056    to: 19876989    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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