Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ATHB51                                                                                           <---------ICU4                                                                                           --------->YAB1                                             ------->TEIL                                 --------->ICU4                                          --------->ICU4                                  <---------ATHB51                                          <---------YAB1                           --------->ALFIN1                                      <-----------HVH21          <----------DOF2 --------->ALFIN1                                   <---------ANAC58           <-----------GT1  <---------ANAC58                                <-----------GT1           <---------YAB1       <---------ANAC58                             <---------AHL20(1)         ----------->GT1        <---------ANAC46                             --------->AHL20(1)   <---------AHL20(2)          <---------AtMYB61                   <---------YAB1  <---------ANAC58 <-----------GT1       <---------At4g35610   <----         <-----------GT1     <---------ARR11(3)   --------->AHL20(2) <----------DOF2--------->ZAT18<-   tacttcgttgttaacaattttctgaatgcaatattttccttgtcatgaatatttaaacttgttattactttcttttagcttaggtgtggacaattatgga  19856500                                                                  ------>ZmHOX2a(1)                                                         ------->GAMYB                    --------->TOE2(3)                  ------>MYB46(1)                              <                    --------->TOE1(3)    <---------HSFB2a(2)    <---------ICU4         --------->AtLEC2                    --------->YAB1       --------->HSFB2a(2)    --------->YAB1 <------ZmHOX2a(1)  ---                  --------->GLK1(2)<-----------RAV1(2) ------>MYB83          <---------TOE2(3)    <-- -----ANAC46 <------ZmHOX2a(1)   <-----------HVH21   --------->AtMYB61<---------------AGL15       --- --------ZAT14   <---------GLK1(2)<-------TEIL      --------->MYB46(3)--------------->AGL15       <--   gtttacttcaaacgaggaagaatcttaaacgctcggttcaggtctcgaaaacaaaccaactcacaatcctgacttaattgaggaaaacaatgcaaaacca  19856600                                                                   <---------AHL20(2)                                                                   --------->AHL20(2)                                                             <---------ANAC46 -------TEIL                                             <---------GLK1(2) ---->MYC2                --------->TOE2(3)             -------->HAHB4            <----------DOF2 -----MYC2              <---------ARR11(3)             <---------ATHB12          <---------DAG2 ---->MYC3          --------->YAB1                     --------->ICU4     --------->MYB46(3)       <- -----MYC3         <---------YAB1       --------->ZAT6 <---------YAB1   <-----------GT1        <-----   catgcatgcttccatatttctatcataatcttataagaaaaaacactactaagtgaaatgattctgtatatatataaccaatgccttttgttttgtgata  19856700                                                                                               <-----                                                                                               ------                                                                                           <---------AHL20(1)                                                                                      --------->At5g28300           <-----------GT1                                                 ----------->GT1 <---------AHL20(2)     ------->TEIL                                                        ---------->DOF2   --------->AHL20(1) --------AHL20(2)    <----------DOF2                                ---------->DOF2  ----------->GT1 ----RVE1(1) <---------YAB1                  <---------LBD16--------->YAB1--------->DAG2   --------->AHL20(2)   ttttatgtatatataactattgacttttgtcatctatggatagtgtctcgggctcttggcaaacatatttcaaagaaaagttaatgactgtaattaatta  19856800                                                                           <---------AHL20(1)                                                                           <---------AHL20(2)                                                                       <---------AHL20(2)                                                                      --------->AHL20(2)                                                      --------------->AtSPL8                                              ------->MYC3         <---------AHL20(2)           <----                           ---------->DOF2    <-------MYC3        <---------AHL20(1)      <----------                     --------->LBD16      --------->ZAT14         --------->AHL20(1)    <---------YAB1                    --------->LBD16       <---------ZAT18      --------->AHL20(2)   <----------DOF2-- ----AHL20(2)  <---------ARR14(2)         <---------ZAT14   <----------DOF2--------->AHL20(1) <------ --->AHL20(2)  --------->ARR14(2)---------->DOF2      <---------------AtSPL8  <---------YAB1  <------   atctgaagctagaaacagaaccccgaggtaaaagaaaaagacagagcacatgaagtttagtacttttatatatttaatatatcattctttcttattgctt  19856900     --------->ANAC58     --------->ANAC58               *TSS   --------->AGP1   ---------->DOF2                  ===============HOX2a_HOX2a -----CCA1(2)                       <------ZmHOX2a(1) --CBF                          ---------->DOF2      <---------ARR14(2) ------->ZAT6               --------->ANAC46         --------->ARR14(2)      <xxxxxxxxxxxxxxxxsmallRNA(s) ---ANAC58                  --------->ANAC58    --------->AtLEC2<---------ANAC58             -------- ---ANAC58                  --------->ANAC58<------ZmHOX2a(2)   <---------ANAC58           ----------   atctctaaagcaaaaacttccctaaaccctaagccaaaggactcagatcgatgcagaaccaagaaggcttgttttggatttgagagccaaatgcaaagaa  19857000                                          --------->TOE2(3)                                          --------->TOE1(3)                                     ---------->DOF2                                                -                               --------->ANAC46                                                <-----                               --------->ANAC58                                            XXXXXXXXXX --->GT1                 <---------ARR14(2)                  <-----------GT1           <----------DOF2 >DOF2      <----------DOF2    --------->ANAC58             <-----------GT1        <-----------GT1  -   aaaaactcttatgtctttgcaaatgccgattccaagaaaaaaagccttaactgtttctcatttttccattacattgtctctgtttttagctttcttcatc  19857100                                                                        <---------MYB52(1)                                                                      --------->DREB2C(2)                                                                      --------->DEAR3(1)                                                                     <------NtERF2                                                                    ------>NtERF2                                                                   --------->DEAR3(1)                                                                   <---------ALFIN1                                                                  <---------ABI4(2)                                                                  --------->ATERF1(1)                                                                  --------->MYB46(3)                                                                 --------->ABI4(1)                                                                 ------>NtERF2                                                                 <---------ATERF1(1)                                                                <---------ATERF1(2)                                                                --------->RAP2.6(2)                                                                --------->RRTF1(3)                                                                --------->RAP2.3(2)                                                                --------->RAP2.3(3)                                                                --------->RRTF1(2)                                                                --------->DREB2C(2)                                                                --------->ATERF1(2)                                                                --------->DEAR3(1)                --------->MYB46(3)                              --------->ANAC46               -------->P                           --------->At4g35610<-----------HVH21             --------->MYB46(3)         <---------ANAC58       --------->RAP2.3(1)     --------->AtMYB61        --------->At4g35610   <---------ZAT2--------->ERF1     <---------ZAT2  <---------ALFIN1            <---------ZAT2 <---------ANAC58  --------->ERF1        --------->ZAT2 ----->ZmHOX2a(1)             <---------At4g35610   --------->ZAT2<------NtERF2     ------>NtERF2 ----At4g35610--------->WOX13(1)<----------DOF2     <---------At4g35610<-----------TGA1        ------ XXXXXXXXXX>MIR858            --------->ZAT2 <---------ANAC58 <---------ATERF1(1)   --------->LBD16 < -------->HSFB2a(2) <---------ATHB12    <---------ANAC58     --------->ANAC46     <---------LBD16 <--   tcctcgacctctgcatcaaccaatgaagtctcagctttgatttcttggcttcacagctcgaactcgccgccaccgtcagtcttctccggctggaatcctt  19857200                                         ------>ZmHOX2a(1)                                         ================================HOX2a_HOX2a                                      ===================================HOX2a_HOX2a                                      ------>ZmHOX2a(1)                              <---------ANAC55(2)                 <------ZmHOX2a(2)              <---                              <---------ANAC55(1)                <---------ARR11(3)             <----    ----------->HVH21         <---------ANAC58                   --------->ARR11(3)          <------- >ZmHOX2a(1)                  --------->ANAC55(2) ------->GAMYB --------->GLK1(1)     <---------MYB52(1) ---------GLK1(2)             <---------ANAC46   <---------MYB52(2)      <---------ANAC58  <--------- -------YAB1<-----------HVH21 <---------ANAC58   --------->MYB46(3)      <---------ANAC58  <---------DAG2   ctgattctgacccatgtcaatggccttacattacttgttcctcctcagacaacaaactcgttacagagatcaatgtcgtctctgttcagttagctttacc  19857300                                                                            --------->At4g35610                                                                        <---------ARR11(3)                                                                        --------->ARR11(3) -------DOF2                      <---------GLK1(2)             --------->LBD16     ------>ZmHOX2a(2) -----DAG2                    --------->ZAT14      --------->ZAT6       --------->ARR14(2) ----GT1           --------->DOF5.7(2)           ----------->RAV1(1)   <---------CCA1(2)           <- -DOF2------>ZmHOX2a(1)  <---------ZAT14 <---------MYB52(1)   <---------LBD16      <------ZmHOX2a(2)   tttccctcctaacatttcttcgtttacttcacttcagaaactcgttatctccaacactaatctcaccggagctatatcttctgagatcggagattgttcg  19857400  Previous    Next  AGI:  At5g48940.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G24240.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G26540.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G56040.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO71564.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73805.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63798.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains I Range:  from: 19856936    to: 19861033    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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