Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------ALFIN1                                                                                --------->ANAC46                                                                <---------MYB52(1)    <-------TEIL                                              <---------MYB46(3)--------->ANAC58 <---------ANAC46                ------->GAMYB             --------->MYB52(1)   --------->bZIP60(2) <---------ANAC58               --------->MYB46(3)  --------->ATHB12            --------->ANAC58 <---------ANAC58       ------>MYB83                -------->HAHB4            <---------ALFIN1 -----------------------TaNAC69(2)  --------->DEAR3(2)<---------WOX13(1)      ----------->RAV1(1) -----ICU4              ------>MYB46(1)            <---------YAB1             --------->RAP2.6(2) ---->YAB1  --------->ANAC58   <---------At4g35610 <---------ATHB12      --------->RAP2.6(3) ----ATHB12 --------->ANAC58 <---------WRKY12      --------->ICU4  <---------ZAT6              ------   atggcgtgcatcccaagcctatcaccttccttcaacggaccgtcttgccataaatgattgacaacggttgtgttagacggccacaccatagtggcaaata  19787600                                         --------->ANAC58                                         --------->ANAC46                                  <---------ANAC58                                  --------->ANAC55(2)                             <---------MYB46(3)                             --------->MYB52(2)  ---------->CDC5                           <---------ARR14(2)    <-----------RAV1(2)                           --------->ARR14(2) --------->At4g35610                                ----                --------->ARR11(3)<---------ANAC46                                   <---------AHL20(2)                <---------ARR11(3)<---------ANAC58                          --------->REM1(2)    <---   <---------CCA1(2)   <---------At4g35610    <---------At4g35610          --------->ALFIN1 <------ZmHOX2a(1)   <---------At4g35610 --------->At4g35610 ---------->DOF2               <---------ANAC46 <---------TOE2(3)   --------->At4g35610 <---------LBD16   --------->ANAC58    --------->HSFB2a(2)     --------->ATHB12 --->YAB1     <---------TOE2(3)   <---------ANAC55(2)        <---------HSFB2a(2)    --------->AHL20(2)   tagtcatctctctattgagatattcagcggatagttgcgttacacgaaagctcagagggccttcttgaagcataggtgtgtagccatttattgaggaagt  19787700                            <---------TOE2(3)                            <---------TOE1(3)                   ------->PIF5                   <-------PIF5                  --------->TGA1a                  <---------O2                  ===============================bZIP_DOF                  <---------bZIP60(2)                  <---------ANAC58                  <---------ANAC46                  <---------TGA1a--------->ANAC58                  <---------ANAC58          ---------->DOF2  <---------At5g28300                     <---------ANAC58          ==================bZIP_DOF   --------->DAG2          <----------DOF2    --------->ANAC58      --------->MYB52(1)             --------->YAB1    --------->ANAC46     <---------ARR14(2)             <---------ATHB12                  --------->WOX13(1)    --------->ANAC58--------->ALFIN1  ---------->DOF2  ------>MYB83<---------ANAC58     <---------ATHB12   ------->TEIL  --------->SPL7  --------->ANAC58      ------>MYB46(1)                 --------->ANAC58 ----->ARR14(2)--------->LBD16--------->At5g28300      <-----------HVH21               --------->ANAC58 ------ARR14(2)----------->HVH21--------->SPL7   <---------At4g35610                   --------->ANAC46   atatgcacgcataaaaccggacgtggagttacggtaagccaaaagtgtttgagcacctatcatgcctttgctcgtcgggtttatgccccaagcaatccaa  19787800                                                                   --------->ZAT14                                                                   <---------ZAT14                                                                  ----------->GT1                                                              <---------ZAT14                                                              --------->ZAT14                                                       --------->ANAC58                                                  <---------HSFB2a(2)                                                  <---------HSFC1(1)                                                  --------->HSFB2a(2)                          --------->ANAC58    --------->ARR14(2)  <---------ZAT6                 <---                        --------->CCA1(2)     <---------ARR14(2)  <---------ANAC46           --------                       <---------ARR14(2)    <---------MYB52(1) <---------ANAC46           <------MYB83                       --------->ARR14(2)   --------->LBD16 --------->ZAT6                 <------MYB46(1)                  ----------->HVH21 --------->ANAC58   --------->ANAC58                 <------ZmHOX2a(1)                  ----------->TGA1  --------->ANAC58   --------->ANAC46      ------->TEIL --------->MYB59              <------MYB46(1)     ---------->DOF2 --------->HSFC1(1)         --------->GLK1(2)<------              <------MYB83--------->ANAC58<---------LBD16 --------->MYB52(1)<---------ARR14(1)<------   ctagaagactcgatgttggtatgacgatatgcaacttcaagcactccggtttctcgaacgtaactgtagtgtagaaacgaatctaacacaggaaggtcaa  19787900                                                                 <-------GAMYB                                                                <---------MYB46(3)                                                                <-----------RAV1(1)     --------->ANAC58                                           --------->MYB111(2)     --------->ANAC58                                           --------->MYB111(1)    ------->TEIL                                                --------->MYB55(2)   --------->MYB52(1)                       <---------MYB52(2)  --------->MYB52(2) ------ALFIN1                              --------->ZAT2    <---------MYB46(3) ->WRKY18(1)                               <---------ZAT2--------->ATHB12   ---------->DOF2 ---WRKY38(1)                              --------->At4g35610<---------ANAC58                 ------ ---WRKY12 --------->ALFIN1                <---------At4g35610<---------ANAC58       <----------ID1   cacatgaacggaagtgtttgccattgttgaagttgtgagagtcgcagctaacttgaacttcattggttgttgctctagtaaagcatggagccaaaacgaa  19788000                                                                                                    <                                                                                                    <                                                                                                <----                                                                                                <----                                                   <---------GLK1(1)                          -------                          --------->HSFC1(1)--------->ICU4                                    <------                          --------->HSFB2a(2)     <---------GLK1(2)  <---------TOE2(2)        <------                          <---------HSFB2a(2)  <---------WOX13(1)    <---------TOE2(3)        -------                          <---------HSFC1(1)<---------YAB1           <---------TOE1(2)        <------            ----------->RAV1(1)          --------->ICU4        <---------ZAT14                ------- --->MYB52(1)     --------->YAB1       --------->YAB1    --------->LBD16                     <-------   cagaaaacacaaacccacaaaaatagttctcgaagacagaaacatgatgatggattttccgagagaacacttaggtttaatctttcgaagtcagagtatc  19788100 <----------DOF2 ---------ANAC58 ---------ANAC58 -----ANAC58 -----ANAC58 -->ARR14(2) ---ARR11(3)                                         <-----------TBP                               <- ---ARR14(2)                           <---------STY1(2)                                          --- -->ARR11(3)                    <-------GAMYB--------->ZAT18                                     ---- -----ARR10                  <-----------GT1 <---------ZAT18        --------->ANAC46 --------->ZAT14 -->GLK1(2)             ------->TEIL<---------MYB52(1) --------->YAB1                <---------ZAT14 --ARR14(1)         <---------TOE2(3)  --------->STY1(2)  ---------->DOF2------------>CBF        ----   ttgcttttgaagaaattcgattaatgaattttttcgttgttagctagtggtctatatttataaagaatacacgattccaattccaagtgtagttgtgaat  19788200         <----------DOF2      <-----------GT1                                                 --------->LBD16      ---------->ID1                                                 --------->ANAC46     <-----------GT1                      ------>NtERF2    --------->AHL20(1)  <---------YAB1                          <---------RAP2.6(3)    ---------->ID1 --------MYB52(1)             <----------DOF2              --------->AHL20(2)     <---------AHL20(2) ------>TOE2(3)   <---------ANAC58       <---------ETT(1)  <---------AHL20(2)------------>CBF ----->YAB1       <---------ANAC46  <---------ANAC58  --------->AHL20(2)  <<<<<<<<<SARD1         <--- ------->GT1      <---------ANAC58  <---------ANAC58  <---------AHL20(2)  <<<<<<<<<CBP60g     <------   cgttatttttcctttttttttcgtgaatcgttctttttccttgccgacaaatctatttaaattttttgtccccccaaatttcaatttatctaatttctac  19788300                                                                            <---------AHL20(2)                       <---------AHL20(2)                                   --------->AHL20(2)                      --------->AHL20(2)                         <---------ALFIN1               --------->DAG2                                    --------->ANAC58          <---------ANAC58                                       --------->ANAC58         --------->YAB1          <---------ANAC58                                       --------->ANAC46       --------->ANAC58          <---------ANAC46                                     xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   ------------>CBF  <----------DOF2  <-----------GT1          ----------->RAV1(1)      --------->ANAC58 ------ALFIN1 ---------->DOF2  <---------MYB52(1)  --------->MYB52(1)      --------->AHL20(2) -----GT1 <---------ANAC55(2) <-------GAMYB        ---------->DOF2         <---------ATHB12  --------   cacatttcaatttcgtaaaagcgatttattttcgttgtttaaactttttaaaccaaaggagttagccacacaatctaataaataaaactcaagcataaaa  19788400                                                              <------MYB83                                                  --------->DAG2                                           ----------->GT1    <------MYB46(1) --------->ANAC58   --------------->AtSPL8           ----------->GT1          <---------DEAR3(1)   <------ZmHOX2a(1)             ---------->DOF2 ---------->DOF2              --------->ANAC58   ----   <---------------AtSPL8 <---------MYB59---------->DOF2    <--------P   --------->ANAC58        ---- ->AHL20(2)             <---------ARR11(3)--------->DAG2   <-------GAMYB --------->ANAC58   ---------   tgttaggagtacaaatttcgatacaagacctaagtaaaagataaaaagtaaaaaagtattgggttggctcaaaacatgccaagacaaactactactgaca  19788500  Previous    Next  AGI:  At5g48750.1    Description:  auxin-responsive protein, putative. similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT3G59070.1); similar to hypothetical protein 26.t00022 [Brassica oleracea] (GB:ABD65002.1); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane (InterPro:IPR006593); contains InterPro domain Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613); contains InterPro domain DOMON related (InterPro:IPR005018) Range:  from: 19787278    to: 19788045    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g48760.1    Description:  60S ribosomal protein L13A (RPL13aD). Identical to 60S ribosomal protein L13a-4 (RPL13AD) [Arabidopsis Thaliana] (GB:Q9FKC0;GB:Q42084); similar to 60S ribosomal protein L13A (RPL13aC) [Arabidopsis thaliana] (TAIR:AT4G13170.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63603.1); contains InterPro domain Ribosomal protein L13, eukaryotic/archaeal; (InterPro:IPR005755); contains InterPro domain Ribosomal protein L13; (InterPro:IPR005822) Range:  from: 19788364    to: 19789948    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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