Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------ZAT2                                                                                 --------->At4g35610                      <---------ANAC55(2)                              <-----------GT1      ------>ZmHOX2a(1)  ---------->DOF2     --------->ANAC55(2)                         <---------MYB52(1)        ========= ------->DOF2       <-----------GT1            --------->ARR11(3) <----------DOF2<---------At4g35610 >ALFIN1  ----------->HVH21               <-----------GT1   <---------ANAC58     --------->ZAT2 >CCA1(2)<---------WOX13(1)            --------->YAB1       <---------ANAC58----------->HVH21   <----   gaaagaaagtgaatgacagaaattacctaaggccatcccaattgtaacagaacttgagggtgacttccctttgttaccatgacagcttgcactcctccca  19753500                                                                       <----------DOF2                                                                   <-----------GT1                         ------>ZmHOX2a(1)                       <---------MYB52(2)                    <---------At4g35610                     ----------->GT1           --------->AHL20(1)    ============================HOX2a_HOX2a               <---------ANAC58            <---------AHL20(1)    <------ZmHOX2a(2)   --------->TOE2(3)             <----------DOF2 <---------DAG2  <---------AHL20(2) ==========HOX2a_HOX2a------>NtERF2>>>>>>>>>>>>>>>>>LFY   <---------ANAC46            --------->AHL20(2) -----TOE1(2)      <---------ATERF1(1)  <---------ATHB12  <---------ANAC58           --------->AHL20(2)   cgatggatcaagtctctaactcggctccttaaattctttccaatgttttttggtctcttttcttgtaaataaccttttgtatattgaataaatttgatat  19753600                                                                     <---------------AGL15      <----                                                                     --------------->AGL15      -----                                                   <---------YAB1--------->At4g35610            <----                                                 <-----------GT1 <---------At4g35610    <----------ID1                                               <----------DOF2   <---------CCA1(2)   ---------->DOF2                                               <---------DAG2<-----------HVH21   --------->ANAC58   <       --------->AHL20(2)                 <-------TEIL   <---------ANAC58        --------->ANAC58  <-  --------->MYB46(3)               --------->MYB52(1)    <---------ANAC58 ---------->DOF2<------ZmHOX2a(1) -------->P             ----------->GT1--------->At4g35610   <-----------TGA1  ---------->DOF2  -----   actaaccaaaaaaatccacaattcaatggaaaaaaaaaaacagatgcaactttaccattgcttcgtcatctctcttaaaagtaaagcaaaaggacaaatt  19753700                                                                                           --------->ANAC46                                                                                          --------->ZAT14                                                                                          <---------ZAT14                                                                                          --------->ZAT18            ---------->DOF2                                                           <---------ICU4      <----------DOF2                                                                 ---------------     <---------ANAC58                                                                 <--------------     <---------ANAC46                                 --------->ZAT18                --------->ICU4     <---------ANAC58                                 <---------ZAT14             --------->AHL20(1) -----AHL20(2)                                        <---------ZAT18             --------->AHL20(2) ---->AHL20(2)                                        --------->ZAT14             <---------AHL20(2) -----AHL20(1)                                 --------->ZAT14                 <---------ICU4 -----------RAV1(1)                            <---------ZAT14              --------->ANAC55(2)   --- --------YAB1             <---------ZAT6    <---------ANAC46  <---------AHL20(2)  <---------AHL20(1) ---->AHL20(1)     --------->ICU4 <----------DOF2  <---------ZAT6     <---------TOE2(3)   <---------ZAT18   tattgttgcttttacaaaggcatgagtagttttagactttagagtagagtatagagttcactcttaaattttaagtttacataattaattagtacaccac  19753800                                                                                         ------>ZmHOX2a(1)                                                                                       ==============                                                                                       <---------HSFC1(2)                                                                                       ------>ZmHOX2a(2)                                                                                      ===============                                                                                     <---------GLK1(2)                                                                                     --------->ARR11(3)                                                                                     <---------ARR11(3)              ------>ZmHOX2a(2)                                                      <---------ARR14(2)             <---------GLK1(1)                               <---------YAB1          --------->ARR14(2)       --------->ATHB12                                  <----------DOF2    <----------DOF2         <      --------->MYB46(3)                             <-----------GT1        <---------DAG2   -------- --------->YAB1                                 --------->TOE2(3)     --------->ANAC46<------ZmHOX2a(2) >AtSPL8    <---------ARR11(3)               ----------->RAV1(1)<----------DOF2      --------->AGP1 - -AtSPL8<------------CBF          --------------->AtSPL8 <---------DAG2 <---------ZAT14--------->HSFC1(2) ------>YAB1--------->ARR11(3)    <---------------AtSPL8--------->TOE2(3)*TSS       <---------At4g35610   taatcacaaccattgatctccctctctctcgctagattagtactaaacaacatttatacctttatgctttctactgaacttttctcagatccttcttcac  19753900       --------->ARR14(2)       <-----------GT1       <---------ARR14(2) =================HOX2a_HOX2a                                                     <---------ANAC58 =================HOX2a_HOX2a                                                     <---------ANAC58 ---------ZAT14                        <---------ANAC58                      --------->ATHB12 ->ZAT14   ------>ZmHOX2a(1)           <---------ANAC58                     <---------YAB1 -------->ZAT14   ------>ZmHOX2a(1)    <---------ANAC46                  <---------AHL20(2)      <---   tcttcagtgtttcctctctcctactaaaaccttcttcagtttcttgaattcaattcttctcttagtcttctccattttatgatttcttggtggtatcaag  19754000                    ---------->DOF2                    <----------DOF2               --------------->AGL15                  <---------ANAC58              <---------ANAC58                        <---------ANAC58              <---------ANAC58                    <---------ANAC58                <---------AtMYB61              <---------ANAC46                    <---------ANAC46        ------>ZmHOX2a(2)           --------->GLK1(1)                      <---------ANAC58       <------ZmHOX2a(2)        ---    ----------->HVH21--------->DAG2              --------->MYB52(2)     <---------ARR14(2)        --- ------ARR11(3)<---------------AGL15             <---------MYB46(3)     --------->ARR14(2)        ---   aactcagtgaccgatttcttgaaaaagctaatgagttttagataaactcgttgcttgctttctcttcattctccgatctgggttttggttttaaatccat  19754100                                                     --------->TOE1(3)                                                     --------->TOE2(3)                                                     <---------MYB59                                                     --------------->AGL15                                                     <---------DAG2                                                    =================================================                                                    ----------------->AG            <----------DOF2                                                    ----------------->AGL1     --------->MYB46(3) ------>ANAC46                        <---------TOE2(3)    ----------->GT1  <----------ID1 ------>ANAC58          <---------ARR11(3)        <-----------GT1   <---------TOE2(3) ------>ANAC58   <----------ID1       <---------TOE1(3)--------->ATHB12 ---------->DOF2   acccaagtagcaaaactagaagacaagagctatagaaattagggtttagagtttaccttattggtgaattgtggtaaaggaacaaactttagggggagaa  19754200                                               <-------TEIL                                             --------->TOE1(2)                                            <------MYB46(1)                                            <---------HSFC1(2)                                            --------->HSFB2a(1)                                            <---------HSFB2a(1)                                            <------MYB83                                            --------->HSFC1(2)                                       --------->HSFB2a(2)                                 <---------------AGL15                                 --------------->AGL15                            <----------DOF2                                <-----------------AGL3                            ------>ZmHOX2a(1)                                <-----------------AGL2                       <------MYB46(1)                   <---------At5g28300 <---------HSFB2a(2)               --------->ATHB12                 <---------MYB52(1)   <---------LBD16                   <---------YAB1          <----         <---------YAB1         ----------------->AGL3                  --------->ICU4      <--------         --------->ICU4         ----------------->AGL2                ---------->DOF2       <-------- ================================================MADS_MADS     <---------ZAT6<------MYB83 --------->ARR11(3)   ctcattcagacatgattcagttactgtttctagttctatttgtggaaggtgcgattgcattcttactgttgataaagattggtcctttgagagagcttgt  19754300  ---------->DOF2           ---------->DOF2--------->At5g28300 -----YAB1     --------->At4g35610   >>>>>>>>>>>>>>>>>LFY                      <----------DOF2 -ANAC58     <-----------RAV1(2)    ------>ZmHOX2a(1)                  <---------MYB52(1) -ANAC58  <---------WRKY18(1)   --------->ARR11(3)                    <-------GAMYB   gattaaaagtcttgaccagatgaagatgggtaaaggtcctgccactgtgaaaacaatcgctggaactatgtctgttattctcttttctaatcttatgagc  19754400  Previous    Next  AGI:  At5g48660.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G07190.1); similar to unknown [Populus trichocarpa] (GB:ABK95486.1); contains InterPro domain B-cell receptor-associated 31-like; (InterPro:IPR008417) Range:  from: 19753873    to: 19755764    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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