Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    <                                                                                                    <                                                                                                    x                                                                                                 <---                                                                                    <---------ANAC55(2)          <---------ARR14(2)                                                        <---------ANAC58<          <---------GLK1(2)                                                         --------->ANAC55(2)          <---------ARR11(3)                                                        <---------ANAC46x          --------->ARR14(2)                                                     --------->GLK1(1) xx         <---------HSFB2a(1)                  <---------YAB1                     xxxxxxxxxxxxxxxx>smallRNA(i)         --------->HSFB2a(1)            <---------YAB1                          <---------ARR14(2) <-         <---------HSFC1(2)            ------>ZmHOX2a(2)                        --------->ARR14(2) --         --------->HSFC1(2)           <------ZmHOX2a(2)                        <------ZmHOX2a(1) xxxx -------AHL20(2)                     <---------ARR11(3)            <---------YAB1<---------GLK1(1)<-- ------>AHL20(2)                     <---------ARR14(2)          <---------AHL20(2) <---------ANAC58< ---AHL20(2)                         --------->ARR14(2)      <----------DOF2--------->YAB1      <---- -->AHL20(2)                         --------->ARR11(3)  <----------DOF2    xxxxxxxxxxxxxxxx>smallRNA(i) --AHL20(2)                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------AHL20(2)    <------- ->AHL20(2)--------->GLK1(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->AHL20(2)   <--------   ttaaaattcgaagattctactatcgagtattgcgataccgatcttattgtgattgtattctttctttttatttttaaatcaggatttcgtgattttaccg  19692900   ----------->GT1   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <---------MYB46(3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ------MYB83 ------MYB46(1) ---------ANAC46 xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------MYB52(1) ---------ANAC58 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --------MYB46(3) ------->MYB55(2) xxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                             ------ -------MYB55(1)                       <---------AHL20(2)                                     <------ ---------ANAC58  <---------LBD16     <---------AHL20(1)                           <------ZmHOX2a(1) ---GAMYB        --------->MYB52(1)   --------->AHL20(2)                          ----------->GT1 --At5g28300   ---------->DOF2        <---------AHL20(2)     <---------TOE2(3)    <----------ID1 ---GT1--------->AHL20(2)      --------->MYB59      ----------->GT1      --------->TOE2(3)--------->YAB1   ttgggtggataaaatcgaatagcggagcgaagttagataattttttttcatatgaagtaaatcgaggtttgaatacattagatgaggaaaaatcatatta  19693000                   ------->GAMYB                   --------->AtMYB61                   --------->YAB1                  <---------MYB55(2)                  --------->MYB46(3)                  <---------ATHB12                 -------->P                 ------>MYB83  --------->ANAC58                 ------>MYB46(1)--------->MYB46(3)                <---------ANAC58                --------->MYB55(1)      --------->TOE1(3)   <---------MYB52(1)            <---------AHL20(2)               --------->MYB46(3)----------->RAV1(1)       --------->LBD16 --------->ANAC58         -               <---------MYB46(2)--------->ANAC46         --------->ANAC46 --------->ANAC46  <-------      <---------ZAT6      --------->ZAT14     <---------AHL20(2)  <---------ANAC58        <---------YAB1      ----------->GT1 --------->ZAT6    --------->TOE2(3) --------->TOE2(3)--------->ANAC58--------->AHL20(2) --------->YAB1<---------MYB111(1) --------->MYB46(3)     --------->ANAC55(2)       --------->AHL20(2) --->YAB1      <---------MYB111(2) <---------MYB52(2)     <---------ANAC55(2)   --------->ICU4 ------ ---YAB1    <-----------GT1    --------->ANAC58--------->ATHB12<---------WOX13(1)--------->YAB1<-----   taagcatagtgtaaataccaaccatcactaaacacccacaaaccttaattcatttgttatccgtaattgcttagcacaagaaataatcaaatattattta  19693100       <---------AHL20(2)       --------->AHL20(2) ---------->GT1 --------AGL15                            <---------YAB1                                  ----------- --->AHL20(2)                       --------->AHL20(1)                    ------>ZmHOX2a(1)         < ----AHL20(2)               ----------->GT1                   <-----------HVH21       --------->ATHB12   aatagaaaattaaaaaatggcaattttgtatagcaaaatatgttattcttttgaaaattccatctgttacacattcctctaattctatcgattggaaaaa  19693200                                                   >>>>>>>>>ARR2                                                   <------------CBF                                                   >>>>>>>>>ARR1                                                  --------->ATHB12                                           <---------AHL20(2)                                           --------->AHL20(2)                                          <---------AHL20(1)                       <---------bZIP60(1)                                          <---------AHL20(2)                       --------->bZIP60(1)                                          --------->AHL20(2)                     <-----------HVH21  <                                       <---------ICU4     <---------TOE2(3)    >>>>>>>>>SUP       <--         <---------YAB1                --------->ATHB51<---------YAB1     --------->ZAT14         <-- >GT1  <-----------GT1     <<<<<<<<<<<<<<<<<LFY  <---------YAB1     <<<<<<<<<<<<<<<<<LFY         <--- ---------ZAT6       ---------->DOF2  --------->ICU4<---------WOX13(1)    <---------ZAT14     <------   tagtattagttacaattcccttctaaagcatccaatggccataatttttttatgattgttaatgaagagaaaacagtggacagtgtcatcacatggaatt  19693300                                                                                                   --                                                                                                   --                                                                                                   --                                                                               -------->HAHB4     <--                                                                               --------->YAB1     <--                       --------->ANAC46                                     --------->YAB1        ---   ----------->GT1     --------->ANAC58      <XXXXXXXXXXXXXXXXXXXXMIR854A-E--------->AHL20(2)     ---  <---------ANAC46     --------->ANAC58    *TSS ------>ZmHOX2a(1)          <---------AHL20(2)     <-- ---------MYB46(3)   <---------ALFIN1<---------ALFIN1                     --------->AHL20(2)   ------ -------ANAC58      <---------ZAT18 ------>ZmHOX2a(2)          ------>ZmHOX2a(1)               <----- -------ANAC58    --------->ANAC58  ==================================HOX2a_HOX2a      --------->AHL20(2) ------MYB46(3)   --------->ANAC58  ===================HOX2a_HOX2a     --------->AHL20(2)     ------- ------CBF        --------->ANAC46<---------ARR11(3)   --------->YAB1 <---------ATHB12 <---------AHL20(2)   ggttgtggataaaacaaaacaccccactccatacatgatccactcttctcctctcaatcttcatcctcactaatgaattaataatacatttaaatataaa  19693400           --------->ATHB12           <---------ICU4           --------->ATHB51          --------->ICU4                                                                       ------          <---------YAB1                                                                       <----- ------->ATHB12                                                                                ------ ------>ATHB1                                                                                 ------>MYB83 ------->ATHB51                   <---------YAB1                                              ------- -------YAB1                    --------->YAB1                                       --------->At4g35610 -------AHL20(2)         ----------->GT1                                             ----------->RAV1(2) ------>AHL20(1)     <---------ARR14(2)                                              <---------At4g35610 ------>ICU4         --------->ARR14(2)                                       --------->ZAT14 ------>MYB46(1) -------ATHB51    <---------------AGL15                                    ------>ZmHOX2a(1) <------- --->AHL20(2)     --------------->AGL15                                 <------ZmHOX2a(2)   --------- ----AHL20(2)    <-----------------AGL1          --------->MYB52(1)    --------->ARR14(2)  --------->DEAR3(2) -->AHL20(2)     <-----------------AG         <---------At4g35610      <---------ARR14(2) ------->TEIL   attattgaattcattatttgctcgattcggaaaatcgtaattgaattcagataatggaagctagaagactcgcgatcctctgttctcacctgaacccacc  19693500                                                                    --------->DAG2                                                                   ---------->DOF2                                                               <---------ANAC46                                                              --------->ATERF1(1)                                                              <------NtERF2                                                             ------>NtERF2                                                             <---------ATERF1(1)        --------->ANAC46                                    <---------DEAR3(1)        ----------->HVH21                                   ----------->HVH21 --->ZAT2                                                   --------->DEAR3(1) ----ZAT2                                                 --------->LBD16 ----->RAV1(2)                                            ------>NtERF2 ->P ------->TEIL                            <---------AGP1--------->ATERF1(1)                     <- --ALFIN1                       --------->GLK1(1)       <---------LBD16                            <- >MYB46(3)    --------->LBD16   <---------GLK1(1)  --------->ARR14(2)                              <-   tggtccgaacccgacccgagacccgactctcagggtctccgattgtagctctggttcttccggcgacgggaaagtggaatcatctactctccaaaacgac  19693600                       <---------ANAC58                       <---------ANAC46                       <---------ANAC58                      <------NtERF2                     --------->REM1(2)                    --------->ALFIN1            <---------GLK1(2)            <---------ARR11(3)           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      --------->HSFB2a(2)      <---------HSFB2a(2) --------ANAC46    --------->LBD16                                             --------->ANAC46 --------ANAC58   <---------ANAC58                                        <---------YAB1 <---------MYB52(2) --------ANAC58   <---------ANAC58              <----------DOF2 XXXXXXXXXXXXXXXXXXXX>MIR838--------->MYB52(1)   tgcgttttctgcaagattatccgtggcgagtctccatgtctcaaggtttacttttatgtctctgtttcttctaattcttatacagaacagaactaactaa  19693700                                                                                   <---------GLK1(2)                                                 <---------ARR14(2)              <---------YAB1     <                        <------ZmHOX2a(1)        --------->ARR14(2)              --------->ICU4  ----                    <---------TOE1(1)         <---------HSFB2a(2)              --------->YAB1    <---                 <---------SPL7              <---------LBD16                <-----------GT1    <-----              <-------GAMYB  --------->CCA1(2)--------->HSFB2a(2)           --------->YAB1     <-----     <----------DOF2<---------TOE2(1)     <---------ARR14(2)          ----------->GT1  <----------DOF2   actcttactttgatgcagttgtacgaggatgatatgtgtttgtgtattctggatactaatccactaagtcatgggtaataaccatgattctttgtttaag  19693800  Previous    Next  AGI:  At5g48545.1    Description:  histidine triad family protein / HIT family protein. similar to zinc-binding protein, putative / protein kinase C inhibitor, putative [Arabidopsis thaliana] (TAIR:AT1G31160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22246.1); contains InterPro domain Histidine triad (HIT) protein (InterPro:IPR001310); contains InterPro domain Histidine triad-like motif; (InterPro:IPR011146); contains InterPro domain Histidine triad motif; (InterPro:IPR011151) Range:  from: 19693343    to: 19695335    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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