Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <---------ANAC58         ---------                                                                   <---------ANAC58         <--------                                  --------->ANAC58                 <---------ANAC46        <---------CCA1(2)       ---------->ID1         --------->YAB1             <---------TOE2(3)              >>>>>>>>>MYB98     <------MYB46(1)        ------->TEIL                 <---------TOE1(3)             <-----------GT1     <------MYB83 <----------DOF2 --------->ANAC58 <---------------AGL15          ----------->GT1   cttaagttggtcgttttgctcttttatatgaatcacaagttataggctagaaactatttagggttcttggtgtgagtgaatagagtgtttaacatatcta  19678000              <--------P         --------->ALFIN1         <---------ANAC46                                                                 <---------TOE1(3)       <---------MYB46(3)                                                                 <---------TOE2(3)     <---------ANAC58                                                                    <---------DOF5.7(2)     <---------ANAC58                                                                    <-----------GT1     <-------GAMYB                                                            ---------->DOF2    <---------MYB46(3)                                           <---------YAB1--------->DAG2 -------   <---------AtMYB61----------->ARR10                         <---------ARR14(2)       <---------MYB52(2) >ARR11(3)   <-------GAMYB <------ZmHOX2a(1)         <---------TOE2(3)---------->DOF2--------->WOX13(1) -ARR11(3)  <---------ANAC46         <---------WOX13(1)  ----------->GT1  <----------ID1 --------->MYB52(1)   ttgttttggttgtggggttgagaagattaggaattggtgactgactaattgtattaatgttgtaaatctgattaaagagaaaaagttcaattaacgttgt  19678100                                       --------->YAB1                        <---------ANAC58        <---------ANAC55(2)         --------->ANAC55(2)              ---------->DOF2            -----        --------->ANAC55(2)       --------->AHL20(2)            <------ZmHOX2a(2)------>ZmHOX2a(2)  <---------YAB1        <---------ANAC46                    <---------TOE1(2)  <---------ARR11(3) ---->GT1               <---------ANAC58    --------->YAB1<---------SPL7       --------->ARR11(3)<---   aaatttgattaagtgatttttcaattgcgtctacatttacataataacataattttctatcgttcgatccaaaaagaagttgatctcttccctcaaaaca  19678200                                             <-----------GT1    <---------At4g35610                      ---------->ID1                                 <-------- ---->TOE2(3)      --------->ANAC55(2)   <----------DOF2        <---------bZIP60(1)  <---------AtMYB61 ------YAB1    <-----------HVH21     <---------GLK1(2)    <---------AHL20(2)     <---------STY1(2)   ttattctgcttcttgagggtcacgttctcttgtagcatcgattctttttccttctccaaatttatggcatcagtttggaaactagctatggtctggtcat  19678300                                                                                 <------------CBF                                                         --------->MYB59        --------->ATHB12                                 <----------DOF2    --------->ATHB12            <---------ICU4                           --------->KAN4(2)       <---------YAB1       <---------ARR14(2)                          <---------KAN4(1)        --------->ICU4       --------->ARR14(2)         --                    ----------->GT1              <---------ICU4    -------->P--------->YAB1       --- <---------ZAT6    <---------TOE1(3)             --------->YAB1  --------->MYB46(3)          -------- ---HVH21          <---------TOE2(3)     --------->TOE2(3)      <---------ATHB12--------->ATHB51  <--   atagtcttatactatttttctaaggtgaataatctctttttatcgtcaaaatcatgatttaggcccatcaaccatatatgcataattgcattcaaacaaa  19678400              <-----------GT1            <---------SPL7   ---------->DOF2                   --------->O2 ------->AHL20(2)       ----------->GT1 <---------ANAC46 ------>AHL20(2) <---------------AGL15 *TSS                  ------------------------>ANAC81 ->YAB1    <---------ICU4            --------->ANAC46        --------->TOE2(3)      --------->YAB1 -------AHL20(2) <----------DOF2     <---------O2   ----------->GT1     --------->AHL20(2)   ataaataaagaaatacttactttacatagtgaaatatagacgtcgtatggaaaatggaaacaacatcaacaaaaaaaaatcaaaaatcaaaactcttcac  19678500                                           --------->YAB1                                        <----------DOF2         <---------ICU4                                  --------->ANAC55(2)           --------->YAB1  ------>MYB83                  <-----------GT1                 --------->MYB52(1)  ------>MYB46(1)    <---------YAB1<---------MYB59             --------->ICU4   aacctatctattgaaaacgaatgcttattgttttttacataactttcaaaattgaattagaggcaataacgacagtgagaatttcaaatttcatttctga  19678600                                                                                             <-------                                                                                    <------NtERF2                                                                                  <---------ANAC46                                                                                  --------->RAP2.3(2)                                                                                 <------NtERF2                                                                                 --------->ATERF1(1)                                                                                 --------->RAP2.3(1)                                                                                 <---------LBD16                                                                                <---------ATERF1(1)                                                                                <---------DEAR4(2)                                                                    <------MYB83<---------RAP2.3(1)                            --------->At4g35610             <---------ANAC58    <---------ORA47(2)                            <---------At4g35610             <---------ANAC58    ------>NtERF2--------                        ------>ZmHOX2a(2)                   <---------DEAR3(1) <---------DEAR3(1)                       <------ZmHOX2a(2)        --------->ZAT14     <------MYB46(1)--------->LBD16                  --------->LBD16               <---------ZAT14 --------->ZAT2 <---------RAP2.3(2)                 --------->DEAR3(1)             <---------ZAT18 <---------ZAT2 --------->DEAR3(1)                 --------->ATERF1(2)          --------->ZAT14 <------NtERF2   <---------ABI4(2)------                --------->DEAR3(2)  --------->At4g35610     <---------ANAC46  --------->ATERF1(1)               --------->MYB52(1)<---------At4g35610       <---------LBD16    --------->RAP2.3(1)  <-              <---------ALFIN1   --------->At4g35610   <-----------RAV1(1)   <---------ATERF1(1) ----        <---------ICU4<---------ARR14(2)      <---------ZAT14--------->LBD16<---------DEAR3(1)<------ZmHOX2a(2)   ggcaatcgcataattcccaccggcgatcggagatgagcagcgcgagactgtgctctcttgtggcggagctaggttacgaaggcgccggaaaattggatcc  19678700                                                      ------>ZmHOX2a(2)                                                      =========================HOX2a_HOX2a                                                      ==============HOX2a_HOX2a                                                    --------->ARR14(2)                                                    <---------AGP1                                                    <---------ARR11(3)                                        --------->ARR14(2)                                        ------>MYB83<---------ARR14(2)                                        <---------ARR14(2) --ARR14(2)                             ------>MYB46(1) ->ARR14(2)                           <---------MYB59 ====================================HOX2a_HOX2a >ZmHOX2a(2)            <---------TOE2(1)   =================HOX2a_HOX2a >>>>>>>>>>>>>>>>>LFY --------MYB52(1)      --------->SPL7 --------->AtMYB61                 ------>ZmHOX2a(1)    -------- ----->LBD16       --------------->AtSPL3   ------>ZmHOX2a(1)------>ZmHOX2a(1)     ------>ZmHOX2a(1)<   cgatagcttcgaatggccgtttcagtacgacgatgctcgacctatcctcgactggatctgttcctctcttcgtccttccaatgtcctctctctcgccgaa  19678800                                                                               --------->ARR14(2)                                                                               <---------GLK1(2)                                                                               <---------ARR14(2)                                                                             --------->LBD16                                                                            --------->HSFB2a(2)                                                                           <-----------------AG                                                                           <---------LBD16                                                                           <-----------------AGL1                                     <-------TEIL                          ----------------->AGL1                                   --------->ARR14(2)                    --------->ARR14(2)                     --------->At4g35610                                 <---------ARR14(2)       ------->TEIL  <---------At4g35610                              <---------ANAC58         <----- ->DEAR3(1)      <---------ARR14(2)<---------GLK1(2)                  <---------ANAC58         <----- ---------YAB1   --------->ARR14(2)<---------ARR14(2)         <-----------RAV1(1)   <-------GAMYB   ctatcactgtatgttctcatttccgctctcattctcagattcacatcgaatgtctcacttctcaatgttgtttcgtttccggattcggttgaatttgtct  19678900  Previous    Next  AGI:  At5g48520.1    Description:  similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ81727.1); similar to Os06g0186500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057010.1); contains domain PTHR19378 (PTHR19378) Range:  from: 19678439    to: 19683662    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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