Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------WRKY12                                         <------ZmHOX2a(2)                      --------->AHL20(2)                                        <---------ARR11(3)                      <---------AHL20(2)                                        --------->ARR11(3)                  --------->AHL20(2)                                   <------NtERF2           ---------->DOF2<---------GLK1(2)   catgacacaatcttcttcaacttcttcattttctctcggcaagatcaagtcaacttgaactcaaaggccaaacttagattatttatattagaatgacata  19677000                            --------->YAB1                           <---------YAB1                         --------->YAB1                         -------->ATHB1                         <---------ICU4                        --------->AHL20(2)                        <---------ATHB51                        --------->ICU4                        <---------AHL20(2)            <---------ICU4     <---------ICU4                  ----------->GT1    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             --------->AHL20(2)     <---------ICU4  --------->AHL20(1) --------->AHL20(1)           --------->AHL20(2)  --------->AHL20(2)  --------->YAB1     --------->YAB1             xxxx     ----------->GT1 <---------AHL20(2)          --------->AHL20(2) --------->AHL20(2)           xxxx   taaaacatggaaaaaaaatatagtaaattattataaaataatgtcttacaaaaaaataatgtcttacaaaaaaaataatgtcttacaaaatgttttccaa  19677100                                --------->KAN4(1)                                <---------KAN4(1)                                <----------TaMYB80                               <---------KAN4(2)                                                -----                            <---------ANAC46                                                    <----                            ----------->GT1                                            <---------AtLEC2                           <---------TOE2(3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <-----------GT1                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                          --------->ARR11(3)              <---------GLK1(2)---------->TaMYB80                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     ------->GAMYB  <-----------------AGL1   <-----------GT1     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <----------ID1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        ------->TEIL    <---------ARR11(3)---- xxxxxxxxxxxxxxxxxxx>smallRNA(se3)      <----------DOF2  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)  <----- xxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->KAN4(2)      --------->AHL20(2) ---------->DOF2<----------   tgtacaacgacaaatagaattttcacaatgaggtatattcttctttttctcaatacaatgaaatgcacattgttggcaaaagataattttcatgtcatcg  19677200                                                                                              <------                                                                                             --------                                                                                           <---------YAB1 ---->HSFB2a(2)                                                                          --------->YAB1 -----HSFB2a(2)                                                                   <---------ARR11(3) ----->LBD16         --------->At4g35610                                  --------->HSFB2a(2)<------- ----LBD16     <-------TEIL<------ZmHOX2a(2)                        ---------->ID1<---------GLK1(2) -HVH21    <---------ARR11(3)                                      <-----------GT1--------->ARR11(3)<   ggaaaatgtccaatatgttcgtatgctggatcaatagtagagcttaatgaagggatagaaaactgagtttttccttctaaaatagattttgtcatgatat  19677300                                             --------->AHL20(2)                                             <---------AHL20(2)                                       --------->AHL20(2)    ------->TEIL                       <---------AHL20(2) <---------REM1(1)                    --------->AHL20(2) ---YAB1                          <---------AHL20(2)                                    --------->ARR14(2) ->ARR11(3)                       --------->AHL20(2)            --------->YAB1 <---------YAB1 --ARR11(3)                      <---------AHL20(2)--------->AHL20(2)     --------->ANAC55(2)   ----- ---------------AtSPL8           --------->AHL20(2)<---------AHL20(2)------->TEIL    --------->AtMYB61   ttgatgtacctagaaatagtttttttgaaaactttttaaattaaaatataaatataaattgatcaagaatgaacttacatgatgaaaccaaaactgcaat  19677400                                           <---------AHL20(1)        <---------AHL20(2)                                           --------->AHL20(2)       --------->AHL20(1)                                           --------->AHL20(1)       <---------AHL20(1)                                      ------------>CBF              --------->AHL20(2)   <---------ANAC58            --------->DAG2     --------->AHL20(2)                   <---------AHL20(2)   <-------GAMYB     ----------->GT1        --------->TOE1(3)   <-----------GT1     <---------ARR11(3)   <---------ANAC58   ---------->DOF2          --------->TOE2(3) <---------AHL20(2)    --------->ARR11(3)  <---------MYB46(3) ---->ICU4 ---------->DOF2 ----------->GT1 <---------ARR11(3)  ----------->GT1         <---------AtMYB61   agttagaaagaaaaaaagtgtcttcattttcgttaaaatgttcaatattttaacaaaaacaaaaatggaatatatttgtgttttgagttttggttgtgat  19677500                                                                                                    <                        <---------AHL20(2)                                   --------->YAB1   -------           <---------ARR11(3)    <----------DOF2                            XXXXXXXXXXXXXXXXXXXX>MIR867         <---------YAB1 --------->AHL20(2)                      <---------TOE2(3)     ---------------  ---------->DOF2     <-----------TBP    <---------TOE2(3)      <---------TOE1(3)  <---------AHL20(2)   gttttaaagtcaagatagtagcatatttatatgtgcttttactaatgttacatagtactagtagttaatgttttatcaaacatattttcttagaaatcat  19677600                                                                             <---------AHL20(2)                                --------->AHL20(2)                          --------->AHL20(2)                        <---------At5g28300    <-----------GT1          <---------AHL20(2)                       <-----------GT1 <---------TOE2(3)                --------->AHL20(2) ---------->DOF2  --------->AHL20(2)  ---------->DOF2               ----------->GT1 ---------WRKY45  <---------AHL20(2) <---------AHL20(2)          --------->ALFIN1 -->YAB1        <----------DOF2 <---------AHL20(2)            --------->DAG2<---------AHL20(1) ------>WRI1    --------->TOE2(3)   <---------AHL20(2)       ---------->DOF2<---------AHL20(2)   agtcaaagaaactataaactttaatttacagtttttaatttaaagtatttcacccgtttcacaaaaagtgttgtttaattttttttttttttttttatgt  19677700                                                                                  ----------->GT1                                                                               --------->DAG2                                                                              ---------->DOF2                                                                           --------->YAB1                                                                       <---------AHL20(2)                                               <<<<<<<<<GATA-1         --------->AHL20(2)                 <---------REM1(1)            <-----------GT1      <---------AHL20(2)      <---------CCA1(2)           <---------CCA1(2)                --------->AHL20(2) ---------->DOF2   tttaaatcaaatctctgtgatgtagtttttaaaatcaaatctctgttttatctatgtgttttcaacttattaattaaaaataaagtgtaaaagaaaaatt  19677800                 <---------ANAC46                                                <---------RAP2.6(2)           <---------AHL20(2)                                        <---------ANAC46          --------->AHL20(2)       <---------MYB46(3)                <---------ANAC55(1)          <---------AHL20(2)       ----------->GT1              <---------MYB46(3)      <---------YAB1      <---------------AtSPL8         <-----------GT1  ------->TEIL    <---------ICU4   tagatgtttttattaatttgtgtgaaaaatggtacagttgttaataggctagaaactatttacctgttgttacatgtatattggcggtctaagcattagg  19677900  Previous    Next  AGI:  At5g48515.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G48605.1); contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 19677083    to: 19677427    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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