Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->ZAT14                                                                  <---------ZAT14                                                         <---------MYB46(3)                                                       <---------MYB52(1)                                                       --------->ATERF1(1)                                                      <-------GAMYB<---------ALFIN1                                 <---------GLK1(2)   <---------DEAR3(1)                           --------->ARR14(2)        <---------ANAC58                        <---------ANAC55(2)          <---------ANAC58                               <                        --------->ANAC55(1)          --------->ALFIN1                              <-        --------->AHL20(2) <---------ARR14(2)        <---------ANAC46                   <------------        --------->YAB1  --------->ANAC58        --------->ALFIN1  --------->ZAT18 <---------At4g35610  ----------->GT1       --------->ANAC58 <-----------GT1--------->WRKY38(1)<---------LBD16        <-- <------ZmHOX2a(1)      --------->ANAC55(2)    --------->ALFIN1  --------->AtMYB61--------->At4g35610   ataggagtaataaaaaacataaacacacgtatacagagtcttttaacaagttggggcgttggctagaccacactgtttggggagagcagaagcgagttca  19663600                                                                            --------->ALFIN1                                                                         --------->ALFIN1                                                  --------->ANAC58       <---------DEAR3(1)                                                  --------->AtLEC2      <---------ZAT14         ---------->DOF2                   ---------->DOF2     <-----------RAV1(1)    <---------ALFIN1                    --------->TOE2(3)      --------->ALFIN1 ------ZmHOX2a(2)                       ------->GAMYB        <---------ANAC46 --------ARR11(3)                    <-----------GT1         <---------ANAC58<---------ZAT14 -----------TaNAC69(2)        --------->ARR11(3)  --------->ANAC58      --------->ZAT14  ----------->HVH21 ----ZmHOX2a(1)        --------->AtLEC2--------->MYB46(3)    <---------ANAC58--------->ZAT14   ggatcaacaccgaaagaaccgagccatggagagttcttgtaaccacaaagacatgcaaaatcagcgtgttgcagagcggtgcagcaaggctgtgatgggc  19663700                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)                                                                >>>>>>>>>GATA-2                                                                --------->AGP1                                                                >>>>>>>>>GATA-3                                                                --------->ARR11(3)                                                                >>>>>>>>>GATA-1                                                               --------->GLK1(1)                                                          <---------At4g35610                                                          --------->At4g35610                                                          ------>NtERF2                                                         <---------ANAC46                           <                                <---------ATHB12         ----------->RAV1(1)                        -                  <------------AtMYB77         ------>ZmHOX2a(1)>>>>>>>>>GATA-4                    --                --------->MYB52(1)             =========================HOX2a_HOX2a       ------>MYB83        <---------YAB1      --------->ZAT18    ==========================HOX2a_HOX2a      ------>MYB46(1)    <---------ARR14(2)      <---------ZAT18  ========================RAV                 ----------->RAV1(1)    --------->ARR14(2) <---------MYB46(3)    <---------ICU4<------NtERF2                --------->AtMYB61    <---------GLK1(2)<---------MYB52(1)      ----------->RAV1(2)<---------ARR11(3)     --------->MYB46(3) <---------TOE1(2)--------->MYB46(3)   <---------At4g35610--------->LBD16         ------->TEIL  <xxxx   tcgtcggattctccttgctaaccgctggtttgcactcattcaactcatcctggctcatgccgcagagatctatcgctactgatgtatcgaccaacatagc  19663800                                                 <---------AHL20(2)         <---------ICU4 --------->TOE2(3) --------->ANAC46         --------->YAB1 --------->TOE1(3) --------->ANAC58        <------ZmHOX2a(2)   <---------At4g35610  --------->AHL20(2)       <---------ARR11(3)   <---------ZAT2--------->ANAC58   --------->YAB1       --------->YAB1  <---------ANAC58     ------>ZmHOX2a(1) ---------ICU4    --------->YAB1        <---------ANAC58  ------>ZmHOX2a(1) -------->YAB1    <---------ICU4    <---------ANAC58  <-----------GT1 ------->ICU4    <---------YAB1     <---------ANAC58<---------YAB1 xxxxxxxxxxxxxxxxxxsmallRNA(si3) <----------DOF2 <---------YAB1    <----------DOF2              <----   cattatcacgatcatcgccatcataaccatagctgctttcttgctcgccatattattatcctcctctctctttttctatatgtttgtttgtgtttgtggt  19663900                                                                                   --------->LBD16                                                                                  --------->O2                                                            <---------ARR14(2)    <---------O2                                                            --------->ARR14(2)    <---------ANAC46                                                    ----------->HVH21            <---------LBD16                      ----------->GT1             <---------ANAC55(2)         <-----------HVH21           <-------TEIL <XXXXXXXXXXXXXXXXXXXXMIR778--------->LBD16    --------------->AGL15       ------->TEIL ----------->GT1           --------->GLK1(1)       <---------------AGL15     <---- -----ANAC46<---------AtLEC2                  <---------GLK1(1)   <---------WOX13(1)           <-----   gttgaaatgaatgtgcatgagaaggtgtatatatatcaagttttagagaaacccgtgaaccagattggattgctccatatagtcacggggatgtgttttt  19664000                                                                 --------->ANAC55(2)                                                            --------->YAB1      <---------DAG2                                       --------->ICU4                         <--      <----------DOF2                                      <---------ATHB12                    ------  --------->ZAT14           *TSS   --------->YAB1      ------------>CBF                        <----- <---------DAG2           <---------YAB1        <---------ARR14(2)                       <---------ZAT14 <----------DOF2     <----------DOF2            --------->ARR14(2)                       <---------ZAT18 -------GT1       --------->ARR11(3)            <---------GLK1(2)<---------ANAC55(2)     --------->ZAT14 ------GT1        <---------ARR11(3)      <----------DOF2--------->WOX13(1)  ------------>CBF <------   ccactttacttttgggagagggtcttttgtcatagaatcataagctttcggattcttatcaattatcaagtatcgattacacaatttccagtccacaaat  19664100    --------------->AGL15    <---------------AGL15   <-----------------AG   ----------------->AGL2   <-----------------AGL1                                                                    --------   <-----------------AGL3                                                                   ---------   <-----------------AGL2                                                                   --------- --------DOF2                                                                               --------- --->ARR11(3)                                              <----------DOF2                 <---------LBD16 ----ARR11(3)    ----------->GT1                   <---------AHL20(2)             --------->YAB1 ---CCA1(2)    ---------->DOF2                    --------->AHL20(2)           --------->TOE2(3)   cttttactacaaatggaaaaagaaaattcaacttgcacattgtatttgtatataaaattctcttttaatcgaaaaaaaacacattaataaacatccgcaa  19664200                                                                                                    <                                                                                      --------->ANAC55(2)                                                                                   <---------MYB52(1)                              --------->ZAT18                                    <---------ZAT6------ ->LBD16                      <---------ZAT14                 ------------>MYB.PH3(1) <---------ANAC55(1) >ANAC46             --------->ANAC58                <---------ANAC55(2)     <---------YAB1    ------ >ANAC58             --------->ANAC58                <---------YAB1<---------MYB52(1) <---------ANAC55(2) >ANAC58   --------->CCA1(2)--------->ZAT14 <-----------GT1 --------->AHL20(2)<-----------GT1 -------   aatactgggcctgatatgagcccaagtaagagtactctaagaagtttcacaaattacgaaaataaaacagttagcgagtattactgttaagtgtcaacaa  19664300              ------->GAMYB        <----------DOF2        --------->TOE2(3)   --------->At4g35610                                                                              <   <---------At4g35610                                                                             --  --------->MYB59                                  <----------ID1                                  <- ---------MYB52(1)                               --------->ANAC46                         <---------GLK1(2) ----->RAV1(1)--------->TOE2(3)              <---------AHL20(2)                           <---------ARR14(2) ------>AtMYB77 --------->ANAC46       ----------->GT1                                    --------->ARR14(2) -->MYB46(3) --------->MYB46(3)      <---------MYB52(1)                          <---------CCA1(2) <-   cagttagctactttaaccacaaaacaaatgagaacatcagttagtatataaacgggacaaaatatagaacgaagaataaatccaaatctctagattctca  19664400    <-----------GT1                   <----------DOF2                 <---------ZAT6 <---------ICU4 ---------AHL20(2)                 <---------AHL20(2)             --------->ICU4     <---------AtLEC2 ------->AHL20(2)             <---------AHL20(2)             ----------->GT1       --------->ANAC58 --------AHL20(1)     --------->AHL20(2)                     <---------ZAT6        --------->ANAC58 --------AHL20(2)     <---------AHL20(2)               ------>ZmHOX2a(1)       --------->YAB1--------   atttttttgctgttctattttcaaataaatgttttattttctttgagaatttcagtcctattagtgtaattagtgataaactcataagcatggcacatac  19664500  Previous    Next  AGI:  At5g48485.1    Description:  DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1); lipid binding. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G48490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15596.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140) Range:  from: 19663458    to: 19664028    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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