Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------WOX13(1)                                        <--------P                                       <-------GAMYB                                      <------MYB83                                      <------MYB46(1)                                      --------->MYB55(2)                                      <---------MYB46(3)                                      --------->MYB52(2)                                     <---------AtMYB61                                     <---------MYB46(3)                     <---------AHL20(2)<---------ANAC58               ----------->GT1       --------->MYB111(1)        <---------ICU4              <--------P        --------->YAB1             <-------GAMYB      --------->ARR11(3)          <---------MYB46(3)      --------->GLK1(2)           <------MYB83                                                      < ---->ZmHOX2a(1)     --------->AHL20(2)<---------ANAC58                                         ----- ---ANAC46    ------>ZmHOX2a(2)   <------MYB46(1)                                         --------->TOE2(3) ---ANAC58 --------->ATHB12      --------->MYB59     <---------AHL20(2)          <-------TEIL ------- ---ANAC58<---------YAB1  ----------->GT1     ----------->HVH21              ------->TEIL --------->TOE1(3)   cctgaaataatcttgatcggtatataatttgtaatttggttggttgatatgacatataatgtctctctactaaactatgcacatccattaaacctcaaaa  19661500                 <---------AHL20(2)                <---------AHL20(1)        <---------bZIP60(1)        --------->bZIP60(1)        <---------ANAC58        <---------ANAC55(2)        <---------ANAC58        --------->ANAC55(2)        ----------->GT1                                                     <-----------GT1        <---------ANAC46                                                <----------DOF2     ----------->TGA1                               --------->YAB1   <---------ARR11(3)     ----------->HVH21                             <---------YAB1    --------->ARR11(3)    <-----------HVH21                            <---------ICU4      <---------ARR11(1) <---------ANAC55(1)    ---------->DOF2          --------->YAB1     <---------CCA1(2) -------TEIL    --------->AHL20(1)              --------->ICU4   <---------TOE2(3)             ------ ------>GT1     <---------AHL20(2)            --------->YAB1    <-----------GT1        --------->MYB52(1) --->DOF2       --------->AHL20(2)        ---------->DOF2<---------ZAT6 --------->TOE2(3)     -------   gttacatgtgacgtaaaataaaattggaaagggatagaagaaaaaaaagaataatggtagtgatattaacatatctttaaacccattcgaaacggatggg  19661600                                                                                                  ---                    ---------->ID1  --------->YAB1--------->YAB1                                  ---         --------->YAB1     --------->ZAT18       <---------ICU4                                  <--    <---------AHL20(2)    --------------->AtSPL8 --------->ICU4 <---------AHL20(2)                <--    --------->AHL20(2) ------>ZmHOX2a(1)         <---------ATHB12             ----------->GT1  ------ ----->GT1     <----------DOF2  <---------------AGL15           <---------AHL20(1)             <----- ---->GT1----------->GT1<---------TOE1(2)        <---------YAB1 --------->AHL20(1)        --------->ICU4   aaaaaataaaatcgtaacttttgtcctatgtgtaccattcagagttacacaatgataacaaactaaaatatttgatgacacagtatataacaaagattaa  19661700                            <----------DOF2                           <---------ANAC58                      --------->ATHB12                             --------->O2          --------->MYB46(3)=================================================bZIP_DOF        <-----------GT1    <---------ANAC58                        ================================== ------>ARR11(3)    <---------WOX13(1)                             <---------TGA1a ------>AHL20(1) <---------YAB1                                    --------->TGA1a           -------- -------AHL20(1) <---------AHL20(2)                   --------->AtLEC2                      --------- -------ARR11(3)<---------AHL20(2)              <------ZmHOX2a(1)  <---------O2   ----------->GT1 --- --->AHL20(2)   --------->AHL20(2)  ----------->GT1  --------->TOE1(2)         ----------->GT1  ----- ----AHL20(2)  --------->YAB1    --------->MYB52(1) --------->CCA1(2)     ------>ZmHOX2a(1)----------   aatattcgagtaaccaattttaattgatttctttccaacggtttaatagaggagacatgcgaacgagacacgagtcctatagggtagtaaatgaaaagtg  19661800                        --------->WOX13(1)                       <---------AHL20(2)                       --------->AHL20(2)                      --------->AHL20(2)                     ------------>CBF                       -                      <---------AHL20(2)              --------->TGA1a                               -                <---------ANAC55(2)                   <---------ANAC58                       --------                --------->ANAC55(1)                   <---------TGA1a                        --------                --------->ANAC46                      <---------O2                           <-------                ----------->GT1                    ----------->HVH21                       <---------                --------->ANAC58                  --------->ANAC46                        <---------MYB52(1)           --------->ARR14(2)                     --------->ANAC58                       <-----------HVH21 =bZIP_DOF <---------ARR14(2)         ----------->GT1 --------->O2----------->GT1        <-----------TGA1 --->GT1  <----------TaMYB80   --------->DAG2     --------->ANAC58--------->YAB1        --------->ANAC46 >DAG2   ---------->TaMYB80   ---------->DOF2    <---------LBD16<------------CBF  --------->GLK1(1) - ------>ICU4    --------->ANAC58     ----------->GT1  <---------ANAC58 <---------CCA1(2)--------->bZIP60(2) ---->ATHB12    --------->ANAC55(2)--------->MYB52(1)------->TEIL--------->ICU4   <---------GLK1(1) - >DOF2   <---------KAN4(2)    ==================================bZIP_DOF<-----------GT1------>ZmHOX2a(1)   attagtaggggcatattcacgtaaataaatcaaaaagtaagggtaaaaatccacggacgtgagagcaattgttatatccatttgaaatcctcgtcaggtt  19661900 *TSS   <---------ARR14(2)         <---------ARR11(3) -------->ANAC55(1)         --------->YAB1                           --------->ANAC58 -------->ANAC46         --------->TOE2(3)                           --------->ANAC46 ->At4g35610        --------->At4g35610                              --------->ANAC55(1)         <--- --->GT1--------->ARR14(2)XXXXXXXXXXXXXXXXXXXX>MIR780.2              --------->ANAC58          ------ --At4g35610  <----------DOF2      --------->ARR11(3)                <---------ANAC55(2)      ------- --RAV1(2)  <---------At4g35610   --------->CCA1(1)                  --------->ANAC55(2)     -------- -------->ANAC58    <---------At4g35610    --------->YAB1     <----------DOF2<---------YAB1  -------- -------->ANAC58  <---------LBD16 --------->RVE1(1)    <---------GLK1(2)    <-----------GT1  ------->GAMYB   acacgaaacgattccgcttctccgcttccttcataaatatctcactcatcgtctctagattgttctttcacacgcaattttcatttctctcttaaccgta  19662000                                                                                   --------->LBD16                                                                                   <---------ANAC46                                                                                  <---------MYB46(3)                                                                                  <---------DEAR3(1)                                                            <-------GAMYB   <---------ANAC58  ------->TEIL                                             <-----------RAV1(1)   --------->SPL7  --------->GLK1(2)                                        <---------MYB46(3)  <-----------HVH21 <---------ARR14(1)                                      <---------At4g35610<---------ANAC58 <---------GLK1(2)                                      <-----------RAV1(1)<---------ZAT2 ------DOF5.7(2)                                      <XXXXXXXXXXXXXXXXXXXXMIR834<---------LBD16 --->DOF5.7(2)           <-----------GT1              <---------At5g28300  --------->ABI4(2)  ------- -->At5g28300 ---------->DOF2                        <-----------GT1      --------->ALFIN1 --------->ANAC58 ->TOE1(3)  <---------HSFB2a(2)                  <---------ARR11(3)  --------->MYB52(1)    --------->ANAC58 ->TOE2(3)  --------->HSFB2a(2)                  --------->ARR11(3)<---------MYB52(2)--------->ALFIN1   aacgaatctctcttctcaaagttttattttctctctgcgatggctcaagaagatgttactgctgttgctactaacggtgctggtccggtggagacgcatc  19662100                                                 ----------->HVH21                                                 ----------->TGA1                                               <------MYB83                                               <---------DEAR3(2)                                              <---------DREB2C(2)                                   --------->At4g35610                             <---------ZAT18                                   <---------At4g35610                          <---------ANAC58                                ---------->DOF2<------MYB46(1)                  <---------ANAC58                          <---------ANAC58    <---------DEAR4(1)      <---------ARR14(2)                          <---------ANAC58    --------->MYB46(2)      --------->GLK1(2)                          <---------ANAC46    <---------MYB46(3)      --------->ARR14(2)   <---------REM1(2) <-----------RAV1(1)      <---------DEAR3(1) --------->HSFB2a(2)   --------->ZAT14   <---------REM1(1)       <---------ORA47(1)  <---------HSFB2a(2)   <------ZmHOX2a(2)   <---------ZAT14  --------->ARR11(3)  ---------->DOF2      <----------DOF2   <-----------RAV1(1) >TEIL       ---------->DOF2 <-------GAMYB--------->DAG2 <---------MYB52(1) <----------DOF2        --   ttgtcttcactgagttcaagcagatgttgctcgttgaagctcaaaaggtcggtgacgctgttactttctacaaatctgcttttggtgcgatcgagtctgg  19662200                                                                                                -----                                                                                                <----                                                                                              <------                                                                      ------>NtERF2           -------                                                         <---------At4g35610                 <-------                                       ------>ZmHOX2a(1) --------->At4g35610                 --------                                 --------->At4g35610----------->RAV1(2)               <---------ANAC58         ----------------->AGL1 <---------ARR11(3)  --------->At4g35610               <---------ANAC58     <----------DOF2            --------->ARR11(3)  <---------At4g35610            <---------MYB52(1) ------->KAN4(2)         <---------WRKY18(1) <XXXXXXXXXXXXXXXXXXXXMIR390A/B      --------->MYB52(2) -   tcattctctttaccctaagcgtaagcttgaccaagagcttcctcatgttctctcttctgagcttaatctcgctggctcttccttcgttgtttgcgacgtt  19662300                                                            ------>ZmHOX2a(2)                                                           <---------GLK1(1)                                                           --------->GLK1(1)                                                           <------ZmHOX2a(2)                                                          --------->ARR14(2)                                                          <---------ARR11(3)                                                          <---------AGP1 ---->ARR14(2)     --------->ANAC46                       --------->ARR11(3) -----ARR14(2)     <---------ANAC55(2)                   <---------CCA1(2) ---HSFC1(2)       --------->ANAC55(2)                 --------->HSFB2a(2)                          < -->HSFC1(2)       --------->ANAC58                    <---------HSFB2a(2)          <---------TOE2(3) --O2   <---------TOE1(2)                              --------->HSFC1(1)           <---------TOE1(3) ->O2   --------->LBD16                           <---------At4g35610     <---------MYB52(1)     <--- ----->ZmHOX2a(1)  --------->ANAC58      <---------AtMYB61<---------ARR14(2)        <XXXXXXXXXXXXXXXX   tcctctctccctggtttttctacgtaagtctctctctctcgttttggtgtttagcttctagatctccatgttttctgttttttttttaggtttttgttcg  19662400  Previous    Next  AGI:  At5g48470.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO17042.1) Range:  from: 19658970    to: 19661588    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g48480.1    Description:  Identical to Uncharacterized protein At5g48480 [Arabidopsis Thaliana] (GB:Q9LV66); similar to unknown [Populus trichocarpa] (GB:ABK95611.1); contains domain SSF54593 (SSF54593) Range:  from: 19661901    to: 19663115    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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