Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->ATHB12                      --------->ATHB51                      <---------ICU4                     <---------YAB1                     <---------ATHB51                     --------->ICU4               <---------GLK1(1)               --------->GLK1(1)              --------->ARR14(2) ------>ZmHOX2a(2) --------->TOE2(3)                           -------->HAHB4 --------ARR11(3) <-----------------AGL3                       --------->YAB1 ----------ARR10  ----------------->AGL1                      <---------YAB1 -----ANAC58  <---------ARR14(2)                             <---------TOE2(3) -----ANAC58 <---------HSFB2a(1)                            --------->YAB1 --->At4g35610--------->ARR11(3)                          <---------AHL20(2) ----At4g35610<---------ARR11(3)                          <---------YAB1                  <---------- ---MYB46(3) --------->HSFB2a(1)                    <---------TOE2(3)                 <----------DOF2 -P       <------ZmHOX2a(1)           <---------ANAC46   --------->YAB1         --------->YAB1   tgatctcaactaggaagatttccataattgaaacctgattttgtgtatcaaactaagaatattaatgataaaaactgtagtttaataacttttaacaaaa  19658600                                                                        --------->AHL20(2)                                                 --------->At4g35610    <---------AHL20(2)                     ---------->ID1              <---------At4g35610   --------->YAB1          <-----                    <-----------GT1           ---------->DOF2         <---------YAB1   --------->YAB1       --------->TOE2(3)<----------DOF2  ------>MYB46(1)         <---------ZAT6--------->MYB46(3)   ---------->DOF2 <-----------GT1     <---------MYB59           ----------->GT1    --------->YAB1<-- -GT1  --------->TOE1(3)------>ZmHOX2a(1)------>MYB83      --------->MYB59--------->YAB1      -------   aaaaaaaaagcttaataggttttatccttttgtgccatttacctagcttaaagctgcaagttaagtagtgttataaaaataaccaatattgataaccggt  19658700                   -------->ATHB1                   <--------HAHB4                   --------->ATHB12                   --------->YAB1                   <---------ICU4                  <---------ATHB12                  --------->ICU4                --------->WOX13(1)                                                             <-----              <---------ATHB12                                                            <---------TOE2(3) ----MYB52(1)------>MYB46(1)                                                        <---------AHL20(2) -------YAB1 ------>MYB83             ---------->DOF2                       <---------ANAC46  ------- ---->GT1   --------->WOX13(1)     <---------ANAC55(2)            ---------->ID1  <---------AHL20(2)   attatttgacaaaccaatcaatcattacaaacttattatgtaaagaattcttgaaatggtttgtttttgttgtaatttgggtatattattttgagataaa  19658800                                                        <----------DOF2                                                        ===================bZIP_DOF                                                       <---------ANAC46                                                   ------->PIF5                                                   ------->MYC3                                 -----                                                   <-------MYC3   ------->MYC4                 <-----                                                   <-------MYC2   <-------MYC3                -------                                                   <-------PIF5   <-------MYC4                <------NtERF2                                                   ------->MYC2  --------->O2                <-------                                                  <---------ANAC58<-------PIF5               <-------                                                  --------->ALFIN1<-------MYC2        <---------ALFIN1                                                  <---------ANAC58------->PIF5        ----------->RAV1(1)                                            ===============================bZIP_DOF  xxxxxxxxxxxxxxx>smallRNA(se3)                                            ---------->DOF2      <---------TGA1a   xxxxxxxxxxxxxxxx>smallRNA(i)                                           xxxxxxxxxxxxxxxx>smallRNA(s)            xxxxxxxxxxxxxxxx>smallRNA(s)                                         <---------MYB46(3)      --------->PIF3(3)xxxxxxxxxxxxxxxx>smallRNA(s)                                       xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <---------PCF2   <-------                                    xxxxxxxxxxxxxxxx>smallRNA(fl3)------->MYC2 xxxxxxxxxxxxxxxx>smallRNA(s)                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<---------O2xxxxxxxxxxxxxxxx>smallRNA(s)                             xxxxxxxxxxxxxxxx>smallRNA(s)        <---------PIF3(3)<------ZmHOX2a(2)                             xxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->MYB46(3)  ===================                             *TSS   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             xxxxxxxxxxxxxxxx>smallRNA(i)   <-----------GT1xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                        --------->ANAC58xxxxxxxxxxxxxxxx>smallRNA(i)       xxxxxxxxxxxxxxxx>smallRNA(s)                        ------>MYB83xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <---------DEAR3(2)<-------                        ------>MYB46(1)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------TOE1(2) ---------                 --------->ANAC58   xxxxxxxxxxxxxxxx>smallRNA(se3)------->MYC3xxxxxxxxxxxxxxxx>smallRNA(s)          --------->ANAC55(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) --------->TGA1a --------->ARR14(2)<-      <----------DOF2   --------->ANAC58xxxxxxxxxxxxxxxx>smallRNA(s)   <---------MYB46(3)   <--------   <-----------GT1    <---------ALFIN1 xxxxxxxxxxxxxxxx>smallRNA(s)--------->ALFIN1xxxxxxxxxxxxxxxxxx ----AHL20(2)    --------->ANAC58 --------->At4g35610  <---------ANAC58<---------ANAC58     <-------- -->AHL20(2)    <---------ICU4    <---------At4g35610  <---------ANAC58<---------ANAC58     <--------   attttaaactttacataataagcaccaagccttcttagctcagtggtagagcgcgtggcttttaaccacgtggtcgtgggttcgatccccacagacggcg  19658900       --------->TOE2(3) ->NtERF2 ----ANAC46 -->RAP2.3(1) --ATERF1(1) --RAP2.3(1) --DEAR4(2) ==============HOX2a_HOX2a       ------------>CBF --ORA47(2)                    <-----------GT1 >ANAC46------>ZmHOX2a(1)   <---------AHL20(2) --------CCA1(2)          <---------YAB1                              *TSS<-----------GT1 -RAP2.3(2)             <---------AHL20(2)    <-----------HVH21      <----------DOF2            ----- >smallRNA(se3)         --------->ATHB51<-----------GT1           <---------ARR11(3)            ----- -RAP2.3(3)             --------->AHL20(2)   --------->ANAC46  <----------DOF2    <---------AtLEC2 -DEAR3(1)        ---------->ID1<-----------GT1            <---------GLK1(2)  <----------DOF2--------   catatatttcctaaatttttgtcgaattatttttttccaatttatccccgtcgtcttcttcgattctttatctttttttcctttgcataaacccaaaacc  19659000                                                                        <---------ALFIN1                                                                     --------->AtMYB61           <---                                                                  --------->ANAC58              <----          <---------ARR14(2)                                      --------->ANAC46            -------          --------->ARR14(2)                                      --------->ANAC58      <---------ARR14(2)   <----------DOF2                                                <---------ALFIN1      --------->GLK1(2)   <---------DAG2                                               --------->AtMYB61      <---------GLK1(2) ---->TOE2(3)                                  --------->YAB1   <---------ALFIN1 ---------->DOF2----- ---->TOE1(3)     ----------->GT1    <---------At5g28300      ------>ZmHOX2a(1)--------->HSFB2a(2) ->ARR14(2)  --------->ANAC46       <-----------GT1        <-----------GT1     <---------HSFB2a(2)   tcaaactttttgaatccgaaacgagaaaacaaactatgttacagtccattcatcttcgtttttcctccacaccatcaccttctaaaagagaatctctcat  19659100                                                                                                <----                                                  --------->ANAC58                              <----                                                  --------->ANAC58                      <---------At4g35610                                                ---------->DOF2                        <---------ANAC58 ------ICU4              <-----------HVH21 <---------ANAC58                            <---------ANAC58 -----YAB1              <----------DOF2    <---------ANAC46  <---------GLK1(2)        <---------ZAT18 -->YAB1<---------MYB52(1) <-----------GT1 <---------ANAC58--------->LBD16           <-----------GT1< ---->ICU4--------->MYB52(2)         <---------------------WRI1            ----------->GT1   ------>ZmHOX2a(1)   aattccatcggttatttgctcatttcctttcacctcttcttcgttccgtccaaagcaaacccagaaactgaagcgtctggttcaattttgcgctccttac  19659200                                                  <---------At4g35610                                                  --------->At4g35610                                             <---------GLK1(1)                                             --------->GLK1(1)                                            <-----------ARR10                                         --------->ANAC55(2)                                         --------->ANAC58                                         --------->ANAC58                              --------->ZAT2            --------->CCA1(2)            <---------ANAC55(2)                           <---------At4g35610           --------->ARR14(2)            --------->ANAC55(1)                           ----------->RAV1(2)           <---------ARR14(2)            --------->ANAC46                              --------->At4g35610         <---------MYB46(3)             <-------TEIL                               <------ZmHOX2a(2)        --------->ALFIN1                <---------LBD16                           --------->AGP1     <---------DEAR3(1)                --------->ARR14(1)                         --------->ARR14(2)     <---------AtMYB61                 --------->CCA1(2)                          --------->ARR11(3)    <------NtERF2                     --------->ARR11(1)                          <---------ARR14(2)  <---------DEAR3(1)                  --------->ARR11(3)                        --------->MYB59 -----TOE1(1)                         --------->ARR14(2)                   --------->AHL20(2)     --- -----TOE2(1)<-------TEIL             <---------ARR14(2)                --------->YAB1 <---------ZAT2 -----------HVH21                   ----------->ARR10                ---------->DOF2 <-----------RAV1(2)   gaggtcggaggtggatacaccgatgaagaattgttcgaaagatacggaactcagcaaaatcaaactaatgtcaaagataaattagatccagctgagtatg  19659300                                              --------->ATHB12                                              -------->HAHB4                                              --------->YAB1               <------NtERF2                  <---------ICU4               --------->ATERF1(1)           --------->ICU4        ---------->DOF2             <---------HSFB2a(2)      <----------DOF2            <---------MYB52(1)                                                <-     <---------ANAC58          <---------ANAC58           <---------TOE2(2)                <---------     <---------ANAC58 --------->ANAC55(2)    <---------ATHB12            <---------YAB1   <---------ANAC58 <----------DOF2      <---------ANAC55(2)    <---------YAB1   ------->TEIL                <---------ANAC58 ---->TEIL   <---------DEAR3(1)<---------ANAC58           <---------TOE1(2)   --------->YAB1       <-   aagctttgcttaaaggaggcgaacaagtgacttccgttcttgaagaaatgattaccctcgtatgtattttgagttatctttcatcaaaacttgcttttgt  19659400                                                                     <---------ANAC58                                                                     <---------ANAC55(2)                                                                     --------->ANAC55(2)                                                                     <---------ANAC58                                                                    --------->MYB52(2)                                                        <---------ANAC46                                                        <---------ANAC55(1)                <---------          <---------ZAT2                       <---------DAG2     <---------MYB52(1)  ------->TEIL --------ANAC58                                <----------DOF2  --------->YAB1     <---------ANAC55(2) -DOF2    --------->ZAT2                    <---------TOE2(3)   <---------ICU4     --------->ANAC55(2) --------ANAC58      <---------ANAC46       <---------TOE1(3)  --------->ICU4<---------MYB52(1)   ttcgtttctctaagcttggcatttcgtcgaacaacttataggcattaagctttatgttacatgtaatcgttacttactcgttagtacgtatttctacgtt  19659500  Previous    Next  AGI:  At5g48465.1    Description:  pre-tRNA. tRNA-Lys (anticodon: TTT) Range:  from: 19658829    to: 19658900    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g48470.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO17042.1) Range:  from: 19658970    to: 19661588    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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