Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                               ------                                                                                               ------                                                                                              <------                                                                                              -------                                                                                             <-------GAMYB                                                                                            <--------                                                                                        --------->MYB46(3)                                                                                        ----------->HVH21                                                                                       <---------TOE1(2)        <---------ARR14(2)                                                             --------->SPL7     --------->MYB46(3)                                    <---------ICU4             ------>ZmHOX2a(1)   ----------->RAV1(1)                               ----------->GT1                 --------->TOE2(2) ------>GAMYB                   <----------ID1     <---------ANAC46                  --------->TOE1(2) -----GT1            <-----------GT1  <---------ARR14(2)  --------->ICU4        <---------MYB46(3)   aaccccaacaaatatggagtttttaaccaaaaaaaaaacaaatatggagttctacgtgtaaaaatttcagattaaaacacatttgttcctacgaccgttg  19637100                                                      --------->At4g35610                                                      <---------At4g35610                                                      <-------GAMYB                                                     --------->MYB46(2)                           ---                                                     <---------MYB46(3)                          <---                                                     --------->MYB52(2)                          <---                                                   <---------MYB52(1)                            <---                                          --------------->AGL15                               <------                                          <---------------AGL15                            <---------AHL20(2)                                         <-----------------AG                     <----------DOF2<--- ----->HVH21                             ----------------->AGL2               --------->ARR14(2) ---- --->WRKY12                              <-----------------AGL2               --------->GLK1(2)  <--- --->WRKY38(1)                           <-----------------AGL3         ------>ZmHOX2a(1)  --------->AHL20(2) ---MYB52(1)                        <----------DOF2<--------P     <---------AHL20(2)       <---------AHL20(1) -->DOF5.7(2)            <---------ATHB12----------------->AGL3  --------->AHL20(2)        --------->AHL20(1) -MYB46(3)        <----------ID1 <-----------GT1 <---------MYB46(3)<-----------GT1------>ZmHOX2a(1)   acaaatgtttttttttttttaagacaaatgatttttttcttttgctaaaattggttagttgacaaaattttatcctatagaatccttttcgaatttattc  19637200        <---------DAG2                                        <---------ICU4     <-----------GT1                                          --------->YAB1 ------>LBD16                        <---------WOX13(1)      <---------ATHB51 ------ANAC55(1)           ------>MYB83                      <---------AHL20(2) ------ANAC58              ------>MYB46(1)         --------->GLK1(2) ------ANAC55(2)         --------->MYB46(3)       <---------ARR14(2) -----GT1<----------DOF2 <---------MYB46(2)       --------->ARR14(2) ------ANAC46           --------->ANAC46          <---------GLK1(2)           <----------ID1 ----->ANAC55(2)<----------DOF2   <---------YAB1 <---------At4g35610  --------->ATHB12 ------ANAC58<-----------GT1<---------ATHB12    ----------->ARR10    --------->ICU4---------->DOF2   cgtatttttacctttttactttcttcaccaaacattttgatagatttagtcagattctcttaaataatgaaatgatttgagagacaaaagagtagccaaa  19637300                                                      <---------TGA2(1)                                                      <---------bZIP60(1)                               ----------->GT1        --------->TGA2(1)                        --------->WRKY12              --------->bZIP60(1)                         <--                        --------->WRKY45            <---------ICU4                                <--                        --------->WRKY38(1)        <---------YAB1                                 ---                       --------->DOF5.7(2)       <---------ICU4                                ------                     <---------ANAC46            --------->YAB1                                <-----                    <---------TOE2(3)    --------->TOE2(3)                                <----------                   <-----------GT1  --------->ICU4 --------->ICU4                         <----------            <---------MYB59   <---------TOE2(3)--------->ARR11(3)                       --------->YAB1   ctcgatagcccataccgaattttacgttgactaatgtaatttttcttaaaatcatgatgtcatcatcttaaactttgaatttttcttcaaatatagtacg  19637400                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                      ---------->DOF2                                                                                      ===============                     --------->ATHB51                                           --------->ICU4   ==== -------TOE2(2)      <--------HAHB4           --------->ANAC58                  <---------YAB1   ---- -------TOE1(2)      --------->YAB1           --------->ANAC55(1)             --------->YAB1     <--- ---->TEIL <---------YAB1     --------->At4g35610                            --------->ICU4      <--- --->ANAC55(2)       --------->ATHB12         --------->ANAC46           --------->AHL20(2)  <------- ----ANAC55(2)       <---------ICU4           --------->ANAC58           --------->AHL20(1)  *TSS---- -----AtSPL3        --------->ICU4           <---------LBD16    <----------ID1<---------ICU4<-------- -----AtSPL8 <------------CBF <---------At4g35610        <-----------TBP <---------AHL20(2) ---------   tatgttaatttttaaaattggaataattagacagatgaaaaacaaaacacggcatgggtttatataacaacaaaataaaataatgactaaaagcagcaaa  19637500       <-----------GT1  <---------ANAC58  <---------ANAC58 ------->ALFIN1 -----MYC3 ---->MYC3 ======bZIP_DOF =====================bZIP_DOF                 --------->GLK1(2) ----->TGA1a                                  <---------ARR11(3) ------O2                                     <---------GLK1(2) ------TGA1a                                  --------->ARR11(3) --MYB52(2)                                  <---------RVE1(1)                              <-------- ----->O2                                   ----------->ARR10                               <-------- -At4g35610                         <---------AHL20(2)                          <-------------------- >At4g35610<----------DOF2         <---------AHL20(2)                        <-----------------------   cgtggggtttctcctttctctctagttggaaagtttttttaatggagagattttgtattcaaacccaaactttgctatcgtttcttcttgttttgcttct  19637600                                                                           <------MYB46(1)                                                                           <---------MYB46(3)                                                                          <---------AtMYB61                                                                         <--------P                                                                   <---------ARR14(2)                                                                   --------->ARR14(2)                                                                   <-----------HVH21                                                               <---------LBD16                                                               ------>ZmHOX2a(2)                 ----                                                              --------->CCA1(2)               -------                                                              --------->ARR14(1)              <------                                                              <------ZmHOX2a(2)              <-------                                                             --------->AGP1<------MYB83      <-------                                                             <---------GLK1(2)               --------                                                             --------->ARR11(3)              <-------       --------->LBD16                                       --------->ARR14(2)             ---------  --------->At4g35610                                        <---------ARR14(2)             ---------  <---------At4g35610                                       <---------At4g35610         <---------ANAC58 -ANAC58         <---------ANAC58                          ----------->ARR10       --------->ARR14(2) -ANAC58         <---------ANAC58                 --------->MYB52(1)    <---------MYB52(1)  <-------- ----ANAC81 <----------DOF2       ------>NtERF2  <---------WRKY12--------->LBD16   <---------ARR14(2) -ANAC81 <---------ARR11(3)      --------->DEAR3(1)      <-------TEIL<---------ANAC46   <---------ANAC58   cttcatctccaggtcttttgcttctactaaaaacgacgacgttgatggaggtaaacgggttcagatccgggtcgggttggttttggatttgggttccttg  19637700        ----------->GT1                                     -------->HAHB4      <---------ARR11(3)                                    --------->ATHB12      --------->ARR11(3)                                    <---------ICU4    ----------->ARR10                                      <---------YAB1 ------>DOF2                                               --------->ICU4 -------->AGL15                                          --------->YAB1 ---------AGL15                                          <---------ICU4 --ANAC46                                      --------->ANAC58 --ANAC58 <---------ZAT6                       --------->ANAC58 ------->AGL15                                 --------->ANAC46 --ANAC58 ----------->GT1              ------>ZmHOX2a(1)--------->ICU4 -------->AGL3                    ----------------------->TaNAC69(2) -------->AGL1                    <----------DOF2     --------->YAB1 ---------AGL1            <---------AtLEC2   <-----------GT1--------->YAB1<---------GLK1(2) <--------   aaagggaagatagtgaaaaactctgtttccatggctctttcctatttctacgctattcataatgattacaaaacaagagtctctgtttcactcagaaact  19637800                             ----------->GT1                                               --------->YAB1                            <---------HSFB2a(2)                                          --------->GLK1(2)                            --------->HSFB2a(2)                                      --------->YAB1                        <---------ANAC58                                         --------->ZAT6 -GLK1(2)               <---------ANAC58                                     --------->AtLEC2   <<<<<   ctcatggagagcctcttcttgctcttgcttctggtaaaaacacttcttctctacaaaaactctcttcttctctgtctccattcacactcacaatcttggt  19637900                                  <---------HSFB2a(2)                                  --------->HSFB2a(2)                                --------->At4g35610                              =======================HOX2a_HOX2a                              ------>ZmHOX2a(2)                             ========================HOX2a_HOX2a                             <------ZmHOX2a(2)                            <---------ARR14(2)                            <---------ARR11(3)                     <------NtERF2                            --------->ARR11(3)                    --------->LBD16                            --------->ARR14(2)                   <---------ANAC58                            <---------AGP1                       <---------ANAC46                            --------->ARR14(3)                   <---------ANAC58                            <---------ARR14(3)                   >>>>>>>>>>E2Fa                           <---------CCA1(2)               --------->ATHB12                         <                     --------->At4g35610                  <---------YAB1                   <---------                     <---------At4g35610                  <---------ATHB51               --------->HSFC1(2)                     --------->ZAT2                       --------->ICU4                 <---------HSFC1(2) <<<<MYB2 <---------YAB1  ----------->ARR10   <------ZmHOX2a(1) <---------LBD16        XXXXXXXXXXXXXX   tttctatctcttgtgaatgaaacagctgtagatcttctgaaaactgaaggagtagaagcgattattggcgggaactcgttgttagaagcgaagcttttag  19638000  Previous    Next  AGI:  At5g48410.1    Description:  ATGLR1.3 (Arabidopsis thaliana glutamate receptor 1.3). Identical to Glutamate receptor 1.3 precursor (GLR1.3) [Arabidopsis Thaliana] (GB:Q9FH75); similar to ATGLR1.2 (Arabidopsis thaliana glutamate receptor 1.2) [Arabidopsis thaliana] (TAIR:AT5G48400.2); similar to ATGLR1.2 (Arabidopsis thaliana glutamate receptor 1.2) [Arabidopsis thaliana] (TAIR:AT5G48400.1); similar to ATGLR1.4 (Arabidopsis thaliana glutamate receptor 1.4) [Arabidopsis thaliana] (TAIR:AT3G07520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43244.1); contains InterPro domain Extracellular ligand-binding receptor (InterPro:IPR001828); contains InterPro dom Range:  from: 19637493    to: 19640651    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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