Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            ------>MYB46(1)                                                     <---------ZAT18          ------>MYB83                                                        --------->ZAT18       ----------->RAV1(2)                                                   <---------ANAC46     <-----------GT1                                                         <---------ANAC58 ------->ANAC46                                                  <----------DOF2 ------->ANAC55(2)                                            ------>ZmHOX2a(1) --------->SPL7 ------->ANAC58 --------->ZAT14                           <---------ARR14(2) <---------ANAC58 ------->ANAC55(1)                                        --------->ARR14(2) ----------->GT1 --------ANAC55(2)         ------>ZmHOX2a(2)    ----------------->AG        --------------->AtSPL3 ------->ANAC58 <---------ZAT14                 ----------------->AGL1      <---------------AtSPL8--- ------ALFIN1   <---------ZAT18    --------->ZAT14 ---------->DOF2        <--------P           <-----   cacgtattaacctgccagtgctcatatgatccacaagtgctgtctccattccctaaatcgggtcctcctttctctggtagcgtacaaagacattactatg  19620700                          --------->ZAT14                       --------->HSFC1(2)                      <---------ALFIN1                   <---------ETT(1)                   --------->At1g77200                  --------->DEAR3(2)                 --------->MYB52(1)                 --------->SPL7                 ------->TEIL               <---------SPL7              --------->ANAC55(2)              <---------ANAC58                                        --------->ANAC58              <---------ANAC55(2)                               --------->ANAC58              <---------ANAC58                     --------->AHL20(2) --------->ANAC58             <---------------AtSPL3          --------->ANAC58   --------->AtLEC2                -----             <---------------AtSPL8          --------->ANAC58<---------ATHB12      <---------GLK1(1)             --------------->AtSPL3      <---------ANAC55(2)-------->P<----------ID1      <---------MYB46(3) ---->TEIL  --------->MYB52(1)     --------->AHL20(2)      --------->WOX13(1) <---------LBD16   ----- ----YAB1   <---------DOF5.7(2)<---------ANAC46  <----------DOF2--------->ANAC58   --------->GLK1(1)   aatgtatagagagataacgtaccgacacttctctcgtataaatatgtaagcctttatatatcaaccatgcaaacgacaaacctggatatcggtgagtgaa  19620800                        <----------DOF2                       <---------DAG2                   --------->ANAC58                   --------->bZIP60(2)                   --------->ANAC58                  --------->ATERF1(1)                        --------->ANAC46          --------->DOF5.7(2)                                --------->ANAC58                       -         --------->TOE1(3)                                   --------->AtLEC2                      <-         --------->TOE2(3)                                   --------->ANAC58                      -- ---->ANAC58     <---------ATERF1(1)<---------CCA1(2)    -------->P                                -- ---->ANAC58---------->DOF2  <---------ALFIN1          --------->MYB46(3)      <---------ZAT6    <---   gccatcccaaacgttaaggccacggccttttccaccttctatctgaagtgaaacaaaacaaccatgcaacgttggaatttagtgttagtgaattgttttt  19620900                              <---------AtLEC2                              <---------ANAC58                              <---------ANAC58                         <-----------RAV1(1)               <---------ARR14(2)    --------->ICU4      ------>ZmHOX2a(2)                 --------->DEAR3(1) -------->TOE2(3)      <---------At4g35610             <---------ALFIN1 --------ANAC55(2)<---------ANAC55(2)     --------->At4g35610           <---------YAB1 ------->ANAC46--------->ARR14(2)         <---------At4g35610      <---------bZIP60(1) ------->ANAC55(2)--------->ANAC55(2)  <--------P    ----------->RAV1(1)--------->ICU4             <- --------GT1   --------->GLK1(2)   <---------ANAC46<-------TEIL    --------->bZIP60(1)   <-------GAMYB   tacgtcaaaattgggagaatatgtgatctgttgcatgcctggtaagcagaagatgcaacaccgaagatgaagtcatcatcgaaatgttttctgttgaaac  19621000                                     <---------ANAC55(2)                                     --------->ANAC46                                     --------->ANAC55(1)                                     --------->ANAC58           <---------ANAC55(1)       --------->ANAC55(2)                                       ------      <------MYB83                  <---------TOE1(2)                                          ------      ----------->GT1    <------MYB83--------->ANAC58           <---------ALFIN1               ------      <------MYB46(1) <---------ANAC46                         <---------ZAT14              <--------      <---------MYB46(3) <------MYB46(1)            <----------DOF2                         ---------     --------->MYB59  <---------ANAC58            <---------At4g35610 <---------------AGL15 ---------   <---------MYB52(1) <---------ANAC58            --------->At4g35610 --------------->AGL15 <-------- -----ZmHOX2a(2) <---------AtLEC2   <---------TOE2(2)   <---------AtLEC2       <-----------ARR10   --   gatcagtttggttacatgtgaatggcttggtctcttcgcacgtaatctcttcagctttgcaagtctccactgctaatagaagaactaagccgagtgcacg  19621100      ----------->GT1 --->ANAC46                             <---------ANAC46 --->ANAC58                             <---------AtLEC2                  ---------->DOF2 --->ANAC58                            <-------TEIL------>MYB46(1)    --------->TOE2(3)            <- -ZAT14                             --------->At4g35610               <----------DOF2             --- >ZAT18                             <---------At4g35610     ------------>CBF                      <-- >ZAT14                ------->TEIL --------->ZAT2 ------>MYB83  --------->AHL20(2)       --------->HSFB2a(2) -ZAT18      --------------->AtSPL8 <---------ZAT2 ---------->DOF2    --------->TOE1(3)   <---------HSFB2a(2) ------->HSFC1(2)<-------TEIL<---------YAB1      <---------MYB59 <---------AHL20(2)   <-----------TBP   aaacttcatggttaatcggtacatgtatgttttcattcagctgcatggaaacctaatgcggtctcaattaaactttaaaagaagaagtttttgtagaaaa  19621200                                                                         --------->ATHB12                                                                         --------->YAB1                                ------>ZmHOX2a(1)                       --------->ICU4                               <---------------AGL15          --------->ANAC58         <----------DOF2       --------------->AGL15          --------->ANAC58        <---------ANAC58       --------->TOE2(3)            --------->MYB52(1)                 ------        <---------ANAC58      <-----------------AGL3        <---------DOF5.7(2)          <-----------   <---------ICU4             ----------------->AGL3      <---------MYB52(2)           <---------AHL20(2) --------AHL20(2)             ----------------->AGL1     --------->At4g35610          --------->AHL20(2) ------>AHL20(2)              ----------------->AGL2     <---------At4g35610         ----------->TBP -------AHL20(2)        <---------AtMYB61     <-----------GT1<---------TOE2(3)     ------>ZmHOX2a(1)-   tttaatctttgctttgtatatttgttttggtgtccttaaatagaaattttacatcaaggagctaacgaaatggaatcatggattcctataaaattggaag  19621300                                         <---------ETT(2)        <---------bZIP60(1)              --------->ETT(2)        ----------->GT1              <---------YAB1        --------->bZIP60(1)         <------------CBF  --------->DAG2                   -------->ATHB1 ----->GT1                         --------->ATHB51            ---------->DOF2            ----------- -CBF   <---------REM1(1)         <---------YAB1     --------->ANAC58        <------------CBF --------->DOF2     ----------->GT1--------->YAB1    --------->ANAC58 >>>>>>>>>MYB2   --------->ZAT6   tgaaaaggtgatgtaagaacacttgttaattcttctattattgtcgacgagaattaagcaaaaaaaaaagaaaaccaagaattgactaagtctagttatt  19621400                                                     <-----------------AGL1                                                     ----------------->AGL1                             --------->ATHB12        ----------------->AGL2                             <---------ICU4         ---------->ID1                           <-----------HVH21    <---------ANAC58                           <-----------TGA1     <---------ANAC58                      <---------ICU4   <---------AHL20(2)                                         ---                      -------->ATHB1  --------->ARR11(3)                                        -----                      --------->ATHB12<---------ARR11(3)                                        -----              <---------WRKY18(1)     <---------AHL20(2)                      <---------GLK1(1) <----         <---------YAB1   --------->YAB1     <---------TOE2(3)           <-------GAMYB         <-----     <------MYB46(1)  --------->YAB1  --------->AHL20(1)                <---------ANAC58       <-----    --------->MYB59  <---------ATHB12 <---------AHL20(1)                <---------ANAC58      <------ >GT1<------MYB83  --------->WOX13(1) --------->AHL20(2)                <---------ANAC46     --------   ttgaatttggtattcttgacccaatcattcgtcattgcaatatatttgtggtttgtccaatttcggacagagtttcgttgaaatctccatagtcagtggg  19621500                                     ------->MYC2                                     <-------PIF5                                     <-------MYC2                                     ------->PIF5                                     ------->MYC3                                     <-------MYC3                                    --------->O2                                    <---------TGA1a                                    <---------O2                                    --------->ANAC55(2)                                    <---------ANAC55(2)                                    --------->bZIP60(2)                                    --------->ANAC58                                    --------->ANAC58                                    --------->ANAC46                                    --------->TGA1a                                    ================================MYC_MYB                                  <---------ALFIN1 -------------->AGL1         <---------GLK1(1) ---->TCP20                  --------->GLK1(1)                ------>MYB83 ---->TCP15(1)               --------->RVE1(1)                ------>MYB46(1) -----PCF2                   --------->CCA1(2)              <---------MYB59              ---------->DOF2 -MYB83                     --------->ARR11(3)              ------->GAMYB              --------->At4g35610 -MYB46(1)                  <---------ARR11(3)  --------->ARR14(2)                     <---------At4g35610 ---MYB46(3)            ======================bZIP_DOF--------->ANAC46                 <------NtERF2 ->ALFIN1               ---------->DOF2  <---------YAB1------>ZmHOX2a(1)          --------->ANAC46 <-   tccaaatcgagcacatagttagtcttcaaagatatcccacgtgatgactgtattctcctcaaccaaattagtgctgcaaaatataaggcagcaaagacgt  19621600  Previous    Next  AGI:  At5g48375.1    Description:  TGG3 (THIOGLUCOSIDE GLUCOSIDASE 3); hydrolase, hydrolyzing O-glycosyl compounds. similar to TGG2 (GLUCOSIDE GLUCOHYDROLASE 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G25980.2); similar to myrosinase [Armoracia rusticana] (GB:AAV71147.1); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 19618529    to: 19621109    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g48380.1    Description:  leucine-rich repeat family protein / protein kinase family protein. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G27190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23320.1); similar to hypothetical protein OsI_019285 [Oryza sativa (indica cultivar-group)] (GB:EAY98052.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63265.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro do Range:  from: 19621315    to: 19624285    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version