Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <------ZmHOX2a(2)                                   ------>ZmHOX2a(1)       <---------------AGL15                                   =================HOX2a_HOX2a                                   <---------------AGL15   --------------->AGL15                   --                                   =========================================MADS_MADS              --                                  --------------->AGL15   <-----------------AGL1      <---------ANAC46                                  --------->TOE2(3)       --------->ANAC58          --------->MYB52(1)               =====================================HOX2a_HOX2a                    ----------->HVH21<               <------ZmHOX2a(1) ==========================================MADS_MADS<---------WRKY18(1)              ----------->HVH21  ----------------->AGL3   <-----------------AG   --------->TOE2(3)<--            <---------At4g35610  ----------->GT1          --------->ANAC58       --------->TOE1(3)<--        <-----------HVH21      <---------ARR14(2)        --------->WOX13(1)  --------->ARR11(3)   ---    --------->YAB1             --------->ARR14(2)  <---------DAG2            <---------ARR14(2)   <--    --------->TOE2(3)    <-----------GT1   <------ZmHOX2a(1)                 --------->ARR14(2)  <---   --------->MYB46(3)   <-------TEIL   ---------->DOF2  --------->ZAT6       <---------ARR11(3)  ---- ---->YAB1  --------->At4g35610<---------ARR11(3)  <----------DOF2      <---------ATHB12         <---   atacaaccatagtcagaggacagagattcacagtatcctaaaaaaggatcaaactttatcactcaatttggcaaatgaagataccttgacggagatagtg  19617400                             ------>ZmHOX2a(2)                           --------->ARR14(3)                           <---------ARR11(3)                           --------->ARR14(2)                           <---------ARR14(3)               <------ZmHOX2a(2)              --------->AGP1<------ZmHOX2a(2)              --------->ARR14(2)           --------->TOE1(1)   ---------->DOF2         <---------ARR14(2)         <------ZmHOX2a(2) ---->NtERF2  --------->ARR14(3)    <---------ANAC55(2) ------->LBD16<---------ARR14(3)    --------->ANAC55(2)------>ZmHOX2a(2) ------NtERF2 --------->ARR11(3)    --------->ANAC58  --------->GLK1(1) -------RAP2.6(2)          --------->ARR11(3)         <---------GLK1(1) -------ATERF1(2)   <---------HSFB2a(2)    --------->TOE2(1) ------>ATERF1(2)   --------->HSFB2a(2)------->TEIL  <---------ARR11(3) -------ANAC46<---------ARR11(3)    --------->ANAC58 --------->ARR14(2)                       ------- --------------------TaNAC69(2)--------->LBD16    <---------TOE1(2)                       ---------->DOF2 ----->RAP2.6(3)------>ZmHOX2a(2)--------->ARR14(2)  <---------ARR14(2)               --------->ZAT14 ------LBD16  <---------ARR14(2) <---------ARR14(2)  --------->ARR11(3)           --------->ATHB12   ccggctaaagcatcgagatcttcgagcaagatcccgatacggacctcgttccaaggatctctgtattgctctctgagaatgaaatcagtggagaaagggt  19617500                                                                                         <---------GLK1(2)                                                                                         --------->ARR14(3)                                                                                  --------->CCA1(2)                                                    --------->ALFIN1              --------->GLK1(2)                                                  <---------MYB46(3)             --------->ARR11(1)                                       <---------ZAT2                    <---------HSFB2a(2)      ---                           <---------ARR14(2)     <---------ANAC46       --------->HSFB2a(2)    <----                           --------->ARR14(2)    --------->ALFIN1       ------>ZmHOX2a(2)<---------ARR14(3)                  --------->YAB1       --------->ZAT2                 --------->ARR14(2) --------->ARR11(3)           <---------RAP2.6(2)         --------->At4g35610            <---------ARR14(2) <---------ARR14(2)        <---------SPL7    <---------GLK1(1)      <-----------RAV1(1) ================================       <---------MYB46(3) --------->GLK1(1)      <---------AtMYB61   <------ZmHOX2a(1)   <---------ARR11(3)      <---------------AtSPL3           <---------At4g35610        <------ZmHOX2a(1)<-------TEIL <----      <---------------AtSPL8          --------->GLK1(2)      <----------DOF2   ----------->ARR10----- ---->GT1 --------->SPL7<------ZmHOX2a(1)      <-----------RAV1(1)=============HOX2a_HOX2a      -----   agaaaatggtggtacggctatgagaaggagttctggtgagaagctggctctgtggtggagcgtctttaggaggatcgagaagagattcgaagattttgga  19617600                                                                          <---------WRKY12                                                                          <-----------RAV1(2)        ---------->DOF2                                                 <-----------HVH21      <---------HSFB2a(2)      <---------------AtSPL8                  <------MYB83      --------->HSFB2a(2)<---------At4g35610                           <------MYB46(1)  <---------ANAC58     <-----------RAV1(2)                            <------MYB46(1)  <---------ANAC58  ----------->HVH21                                 <------MYB83        <---------REM1(1) --->ZmHOX2a(2)   <---------MYB46(3)                                  <---------MYB46(3)----------->GT1 -----AGP1---------->DOF2--------->At4g35610                        <--------P          <------MYB83 ====HOX2a_HOX2a <---------AtMYB61                              <---------ANAC46   <---------ANAC46 -----ARR14(2)   --------->ALFIN1       ----------->RAV1(2)    <---------LBD16  --------->ALFIN1  <-- ---->ARR14(2)   <---------DEAR3(1)<-------TEIL     --------->TOE1(3)--------->ALFIN1   <------MYB46(1) ---->ARR11(3)<---------DEAR3(1)----------->GT1    --------->At4g35610--------->MYB59<------ZmHOX2a(1)   tctggcttcccaaagagcggtggtgacaggtgaatggtacatacctggccataagcttaagggttttcgggttgggtcagaggtggaggatggtgaagcg  19617700                                        <------MYB46(1)                                        <------MYB83                                        <---------ANAC46                                        <---------ANAC58                                        <---------ANAC58                                       <---------MYB46(3)                                       --------->MYB55(2)                                       <------MYB46(1)                                     <--------P                                   <---------MYB46(3)        --------->MYB52(1)         --------->ATHB12        <----------DOF2                   --------       ----------->HVH21          <---------YAB1         <---------HSFC1(2)              <------MYB46(1)      --------->ATERF1(1)    <---------GLK1(1)           --------->HSFC1(2)              ----------->GT1 --------->ALFIN1            --------->GLK1(1) ---------->DOF2    <---------LBD16        <------MYB83 -------AtMYB61         <---------LBD16<------MYB83     --------->GLK1(2)        --------->ALFIN1   aaggtggagacgacggagatgggtcttggggaattcatggttgggtgaagaaagtgagaagctttgtttctgggtttttgaaaatgggggaaggtgaaag  19617800            --------->WOX13(1)          *TSS  ---------->DOF2                                              <----------DOF2      <--     <---------------------WRI1                      <----------DOF2 <------------CBF        <-------    ----------->GT1     <------ZmHOX2a(1)        --------->WRKY12   <<<<<<<<<RAP2.2         <-------- -->DOF2  <---------ATHB12 <------------CBF    <----------DOF2     <---------TOE2(3)        <--------   agaagatggtgaatcattcaaaggaaggacattgtttgatttttagttcctttgactttggagtttttttagattgtttctttttttgacatttgcttta  19617900                             --------->ZAT14                             --------->ZAT18                             <---------ZAT14                        ---------->DOF2                                       <-----------GT1 -------ZAT6         --------->TOE1(3)                             <----------DOF2           -------- ---DOF2            <---------At4g35610                         <---------AHL20(2)          <-------- -ANAC58            --------->At4g35610  <---------GLK1(2)<----------DOF2<----------DOF2   --------->ANAC46 -ANAC58  <-----------GT1    <---------ZAT18        <---------ATHB12   ---------->ID1  <-----------GT1   gtgtttttttttttacaaggttagcttaaagagcactctgtctgattctcatcaaacattctttattttctttgtctttttttctaattttacaatcaac  19618000      --------->AHL20(2)                                  <---------ANAC58      <---------AHL20(2)           <---------TOE2(3)<---------AHL20(2)      <---------AHL20(1)           <---------YAB1 <---------YAB1      --------->YAB1         <---------YAB1 <---------YAB1<---------ANAC58 ->YAB1<---------AHL20(2)------->TEIL  ----------->GT1    <---------ANAC46                          - -ATHB12                <---------AtLEC2   --------->AHL20(2)                                       -   aatttcaataaaatttgagaacgtatgcatgttgattaagcttgttaaaattatgttattgtgtgtttcttctacacttacaaatggtattggagcctta  19618100                                                                <---------YAB1                                                                --------->ICU4          ------>MYB46(1)                                                              --------->YAB1            ------>MYB83                                                             <-------TEIL         <---------ETT(2)           <---------ARR14(2)                             <---------MYB46(3)      --------->ETT(2)           <---------ARR14(3)                       --------->CCA1(2)          <------MYB83           --------->ARR14(2)                       --------->ARR14(1)         <------MYB46(1)           <---------ARR11(3)                      --------->ARR11(1)         <---------AtMYB61           --------->ARR11(3)                      --------->ARR14(2)        <--------P----------->RAV1(1)           --------->ARR14(3)                      <---------ARR14(2)      <-----------RAV1(1)         ----------->ARR10 ---------->DOF2       ----------->ARR10   --------->ATHB12--------->MYB46(3) ----->MYB83<---------RVE1(1)         ---------->DOF2<-------TEIL<---------ICU4<---------MYB46(3) ----->MYB46(1)     --------->YAB1 ----------->GT1<---------GLK1(1) <---------AHL20(2)--------->AtMYB61   cctagcacaagaagatattcaatcttagggaaagagactgtaaagaacatggagatacgatggttcataattcattggtgttggtcgaccaacattcttg  19618200                                            <------ZmHOX2a(2)                                            <---------YAB1                                           --------->ARR11(3)                              --------->CCA1(2)           --------->ANAC58  --------->ARR11(1)                                      ------->TEIL           --------->ANAC58  <---------ARR11(3)           --------->YAB1        <---------ANAC46           --------->ANAC46  --------->ARR14(2)          <---------At4g35610  --------->MYB55(2)        --------->TOE1(2)    <---------ARR14(2)          --------->At4g35610  <---------MYB46(3)      --------->ANAC58       --------->ARR11(3)       <-------TEIL           <---------MYB52(1)      --------->ANAC58   --------->YAB1    <---------ARR11(3)              <---------MYB46(3)   gatgccctaagctacgacattggataatcaagatatgatgcctaagatcatagggattcatcagaacgtttagacatcggttgtttgaatctgaatgtga  19618300  Previous    Next  AGI:  At5g48370.1    Description:  thioesterase family protein. similar to thioesterase family protein [Arabidopsis thaliana] (TAIR:AT2G30720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38832.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38833.1); similar to Phosphoglucomutase/phosphomannomutase C terminal; Thioesterase superfamily [Medicago truncatula] (GB:ABN08987.1); contains domain PTHR12655 (PTHR12655); contains domain SSF54637 (SSF54637) Range:  from: 19615749    to: 19617810    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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