Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------ATHB12       ------>MYB46(1)       ------>MYB83     --------->AtMYB61     <---------MYB111(1)   ------>NtERF2                                    <---------GLK1(1)  --------->RAP2.6(2)   --------->TOE2(3)   <----------DOF2     <---------AHL20(2) --------->ZAT18<---------At5g28300        <---------ICU4------>ZmHOX2a(1) ----->NtERF2  <-----------GT1      <----------DOF2------->TEIL--------->ICU4   gaggccaccaaatcaatttactgctatctcaacatgctcttttaatctttatgcatttcctagtaaatatttgtatgagcacagcaaaatcactcactat  19587100                                                 <---------HSFB2a(1)                                                 --------->HSFB2a(1)                                                 --------->HSFC1(2)                                                 <---------HSFC1(2)                                                <---------ARR11(3)                                     <---------ICU4                                    <---------ATHB12                                --------->MYB46(3)                                 <---------KAN4(2)           --------->ZAT18  <---------ETT(1)    <---------ARR14(2)             <---------TOE2(3)           <---------ZAT14  ----------->HVH21   <-----------ARR10              <---------TOE1(3)    <---------GLK1(2)      --------->MYB46(3)   --------->ARR14(2)             --------->MYB59-------    <---------ARR11(3)     --------->DEAR3(2)   --------->GLK1(2)    <---------ARR14(2)      --------    --------->ARR11(3) ----------->HVH21       <---------GLK1(2)     --------->ARR14(2) --------->YAB1   tcgaaagattttgcacactgttcaaatgacccgacccaatcttggcccagaatcttctcactcactattcggattttagtttaggtataatcgtaatctt  19587200                                                               --------->YAB1                                     <---------ATHB51       --------->YAB1                      <---------ANAC58--------->YAB1       --------->KAN4(1)                    <----               --------->ARR11(3)    <---------ATHB12     <---------KAN4(2)                    <-----               <---------ARR11(3)    --------->ICU4      --------->YAB1                        ------              <---------GLK1(1)  --------->ZAT18       --------->LBD16                         ------     <---------YAB1   <---------ANAC58<---------ICU4  <---------HSFB2a(2)               <-----------GT1 -->ATHB12    --------->GLK1(1)  <---------ZAT18      --------->HSFB2a(2)     ----------->GT1  <----- ->ICU4    <---------YAB1 <---------YAB1            ------>ZmHOX2a(1)  <---------YAB1<---------ICU4   tggaattttgaatatgatatcttgacttgtcattgtgcaataatgttctgactcctccagaataatcagcattttgaatactgtgaaatattactaattt  19587300                                                                   <---------ANAC58                                                              --------->ANAC46                                                              --------->ANAC55(2)          <-----------GT1                                     --------->ANAC58       <---------ICU4                                         --------->ANAC55(1)      --------->AHL20(1)                                      --------->ANAC58      <---------AHL20(1)                                    <---------DOF5.7(2)        --------->ANAC46      <---------AHL20(2)                                   <---------WRKY12            --------->ANAC55(2)      --------->AHL20(2)                                 --------->At5g28300      <-------GAMYB   <---------AHL20(2)                                --------->MYB52(1)          --------->ALFIN1  --   --------->AHL20(2)    --------->LBD16           --------->LBD16 --------->ANAC55(2)<---------TOE2(3) -----AHL20(2)      --------->GLK1(1)             --------->ANAC46 <---------ANAC58  <---------DOF5.7(2) ----AHL20(2)       <---------GLK1(1)             --------->ANAC58 <---------ANAC55(2)<---------TOE1(3) --->AHL20(2)      <---------ARR11(3)             --------->ANAC58--------------->AtSPL3         <--- --->AHL20(1)      <---------GLK1(2)             <---------LBD16 --------->MYB52(1)--------->DOF5.7(2) ----AHL20(1)--------->ZAT6              <---------YAB1 ------->GAMYB     ---------->DOF2        ----   aatattaaaatattaccactagatttccgaaaacacccccattactcttgctccgcaacggtaaacgtaacgtactcaaaggggtgttaacgtaatttca  19587400                                                                  *TSS                                                              <----------DOF2                                                             ------>ZmHOX2a(2)                                <---------ANAC55(2)         <---------RVE1(1)                                <---------------AGL15       <------ZmHOX2a(2)                                --------->ANAC55(2)        --------->ARR11(3)                    --------->LBD16                        --------->AGP1                     -------                   --------->LBD16                --------->AHL20(2)                        ---------               <---------ARR14(2)                --------->AHL20(2)   <----------DOF2       ------->GAMYB          --------->MYB52(1)<-----------HVH21--------->AHL20(2)   ---------->ID1            ---------        <---------MYB52(2) --------->ANAC46----------->GT1 <---------ARR11(3)              --------->MYB46(3) ----->GAMYB   --------->ARR14(2)        ---------->DOF2  <---------GLK1(1)          --------->ANAC58 ------At4g35610  <---------HSFB2a(2)  <---------TOE2(3)  --------->GLK1(1)      --------->YAB1 ----->At4g35610  --------->HSFB2a(2)  <---------YAB1---------->DOF2  <---------DAG2 --------->ANAC58   actgaaaaaaactaacggttcccgagaacccatcacatattaagaaagaaaataaaaaagagatctttttcgcttttccacaatcacaagacaaccacaa  19587500                                                           ------->TEIL                                                           <---------ARR14(2)                                                           --------->ARR14(2)                                                          <---------CCA1(2)                                                    <---------ANAC58                                     ------>ZmHOX2a(2)<------NtERF2     --------->ANAC58               <---------------------WRI1     --------->ANAC58          <----------DOF2      <---------ANAC46 -->ANAC46               <---------ANAC58           <---------RAP2.6(2) >TOE2(3)                <---------ANAC58           <---------ANAC58                   ----------->RAV1(2) -->RAV1(1)            <-----------GT1      <<<<<<<<<<<<<<<<<LFY        <---------GLK1(1)------>ZmHOX2a(1)   aactctcactccaaaactctcaattttgccttcctttgatcgaatactacaatggcgtctgtatctgcaattggagttctcaaggtacctcctgcttcga  19587600                               --------->PCF2                              <---------ARR14(2)                              --------->ARR14(2)                            <---------DEAR3(2)                            <---------ATERF1(1)                            <---------MYB46(3)                           <---------DEAR3(1)                          --------->ATERF1(1)                         ------------>AtMYB77                     --------->ANAC58                                               <---------GLK1(1)                     --------->ANAC58                                              --------->ARR11(3)                    <---------LBD16 --------->O2                             ------>NtERF2                --------->ANAC58    <---------O2                         ------->GAMYB   --------->ANAC46                --------->ANAC58 --------->TOE1(2)                      --------->MYB46(3)          -               --------->DAG2--------->ATERF1(1)        ------>ZmHOX2a(1)----------->HVH21        <--              ---------->DOF2<-------GAMYB       <----------DOF2       <---------At4g35610    <------           --------->LBD16<------NtERF2 <------ZmHOX2a(1)  ------>ZmHOX2a(1)<---------ETT(2)  -------         <---------LBD16<---------DEAR3(1)   <----------DOF2   <---------MYB52(1)  <---------ARR11(3)   cttccaattccaccggaaaagccacggaggcggttcccacgaggactctttctttctcctcctctgttacttcatccgacgacaagatttcactcaaatc  19587700                                   --------->GLK1(2)                                   <---------ARR14(2)                                   --------->ARR14(2)                                  --------->GLK1(1)                                  <---------GLK1(1)                                 <------ZmHOX2a(1)                   --------->GLK1(2)                                 ===============HOX2a_HOX2a         <---------GLK1(2)           <----------DOF2     <---------TOE1(2)                    <---------ARR14(2) <-----------HVH21             <---------TOE2(2)                    --------->ARR14(2)             -- -------->DEAR3(1)      <---------MYB46(3)             ---------->DOF2                           ---- -------At5g28300      <---------MYB52(1) --------->YAB1     <-----------HVH21                  <---- ---ARR14(2)         <-----------RAV1(1) <------ZmHOX2a(2)   <---------RAP2.6(3)               <----- -->ARR14(2)      <---------ARR14(2)     <---------ATHB12   --------->RAP2.6(2)                ------   caccgtctcccgtctttgtaaatctgttgttcgcaggaatccgatcatcgtctctcccaaagccgtctcagattctcaaaactctcaaacttgtctcgat  19587800           <---------ANAC46          --------->At4g35610       --------->ZAT2       <---------ZAT2  <---------YAB1 ---->ZmHOX2a(1)                                     <---------TOE1(3)                    <---------MYB52(1) ------->RAV1(2)                          <----------DOF2     =====================HOX2a_HOX2a --ZmHOX2a(2)    --------->YAB1         <---------YAB1        <------ZmHOX2a(1)         ----------->GT1 ----ARR14(2)  --------->ANAC58       <---------CCA1(2) <----------DOF2     <------ZmHOX2a(2) --->ARR14(2)  --------->ANAC58 <<<<<<<<<TBF1 ---------->ID1<---------TOE2(3)           <---------ZAT6   cctgatgctagcagcgtaagcatcatctatcttcttcttcttatctttgttgtttaagctttgaggaatgtagttgagatcaaattggaactgttaattg  19587900                                         --------->ZAT2                                         --------->At4g35610                          <---------ZAT2                                 <------ZmHOX2a(1)                                    --------->At4g35610                          --------->GLK1(2)         ---------->ID1                    <---------At4g35610                       <---------KAN4(2) <---------ZAT2                               --------->ZAT2                   <---------LBD16       <---------At4g35610                          ----------->RAV1(2)                  <---------ANAC46   --------->ALFIN1 <----------DOF2            <---------ARR14(2)   ttgtcaatttgcagagtgttttggggataatcttaggaggtggagctggaactcgtctttatccacttacgaagaagagagcgaaaccagctgtgcctct  19588000  Previous    Next  AGI:  At5g48290.1    Description:  heavy-metal-associated domain-containing protein. similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G07600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41118.1); similar to Os04g0469000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053041.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) Range:  from: 19586143    to: 19587025    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g48300.1    Description:  ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 1); glucose-1-phosphate adenylyltransferase. Identical to Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (APS1) [Arabidopsis Thaliana] (GB:P55228;GB:O64400;GB:Q96534); similar to ADG2 (ADPG PYROPHOSPHORYLASE 2), glucose-1-phosphate adenylyltransferase [Arabidopsis thaliana] (TAIR:AT5G19220.1); similar to Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) (GB:Q9M462); similar to ADP-glucose pyrophosphorylase small subunit Cag Range:  from: 19587466    to: 19590030    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version