Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->ATHB51                                                                              <---------ICU4                                                                              <--------ATHB1                                                                              --------->AHL20(2)                                                                              <---------AHL20(2)                                                                             --------->ICU4                                                                             <---------ATHB12 ---------ANAC46                                                             <---------ATHB51 ---------->GT1                                                  <---------ANAC46 -------ANAC46                                                   <---------ANAC58 ----MYB46(1)    ------>ZmHOX2a(2)     <---------MYB52(1)        <---------ANAC58 ----MYB83       <---------MYB59      --------->LBD16           --------------->AtSPL8 ---ARR14(2)   <---------AGP1         --------->At5g28300    --------->ARR11(3) -->ARR14(2)   <-----------ARR10     ----------->GT1 XXXXXXXXXXXXXXXXXXXX>MIR4243                  -- >LBD16  <-----------RAV1(1)  ---------->DOF2<---------At5g28300--------------->AtSPL3          <----   tggtgtaaaacctgttggatctaacccataaacaaagaaccgtgaattacagttgaaattgtagatttcgtacatgacaataatttgctcgagcatcact  19584500                         <---------ARR14(2)                         --------->ARR14(2)                                            <----------DOF2                       <---------RAP2.6(3)                                        <---------HSFB2a(1)                      <---------ANAC46                                            --------->HSFB2a(1)                      <---------ANAC58                             --------->ZAT6 <---------MYB46(3)                      <---------ANAC58                           <-----------GT1  <------MYB83 --------->ICU4      ----------------->AGL1            --------->TOE1(2)          --------->HSFC1(2) <---------YAB1 <-----------RAV1(1)                    --------->TOE2(2)          <------MYB46(1) ------->YAB1   --------->ALFIN1                     <---------ARR11(3)           <---------HSFC1(2) ------DOF2 <---------ANAC46         <-------TEIL <XXXXXXXXXXXXXXXXXXXXMIR4243 <---------AtLEC2   ttcatgattttgtggtctgtgttgccgtatttgagagcatacatttcatgttcgaaatctacgattttaactctaatttttggatggttctttatttcaa  19584600                         --------->YAB1                 <---------ZAT14                              <---------ANAC58                 --------->ZAT14                              <---------ANAC58                 --------->REM1(2)                 <---------AHL20(2)           --------->ARR11(3)                  <---------AHL20(2)           <---------ARR11(3)                 <---------AHL20(2)                         <-------TEIL          <---------CCA1(2)             <----------DOF2   ---------->ID1   --------->ANAC58         -     ----------->GT1 <---------ZAT6     <---------DAG2  <-----------RAV1(1)--------->ANAC58       <--   ttacagagggatatatctgtgtagtattcatactgtttccaacttttttttattttttttgttgtcttgttcatatcaagctaaaactatatacatgtag  19584700                                                                                       ==============                                                                                       ------>ZmHOX2a(2)                                                                                      --------->GLK1(1)                                                                                      <---------GLK1(1)                                                                                      <------ZmHOX2a(2)                                                                                      ===============                                                                                     <---------AGP1                                                                                     <---------ARR11(3)                                                                                     <---------ARR14(2)                                                                                     --------->ARR11(3)                                                                                     --------->ARR14(2)                                                                            ----------->GT1   -------           ------>ZmHOX2a(1)                           --------->GLK1(1) --------->GLK1(2)    <------  <---------GLK1(1)                          <----------DOF2             <---------ARR14(2)  <------- -------->ATHB12                            <---------ANAC58             <---------ARR11(3)  -------- -------WOX13(1)<---------CCA1(2)           <---------ANAC58             --------->ARR14(2) <--------   attgatttctctcctctcatgtcttagtaagagaagaagggtttttgcttttgtgagatttcaaatcaaatgcaaaatctgtgaatagatctcccatgat  19584800                                                            --------->ARR11(3)                                                            <---------ARR11(3)                                                           <---------GLK1(1)                                                           --------->GLK1(1)                                                           <---------RVE1(1)                                                           --------->RVE1(1)                                                           --------->CCA1(1)             <---------YAB1     --------->YAB1                                        <---------CCA1(1)             <---------TOE2(3)    <---------YAB1                               <----------DOF2                        <-----------GT1 ================HOX2a_HOX2a                    <---------DAG2                     --------->ICU4 ================HOX2a_HOX2a                ----------->HVH21  <----------DOF2    <---------AHL20(2) -->YAB1                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------YAB1    <-- ---ICU4                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<---------AHL20(2)     ---- --ATHB12                             --------->ATHB12    --------->ARR11(3)  --------->YAB1     <--- ->ICU4                              <---------YAB1       <---------ARR11(3) <---------YAB1--------->TOE2(3) -TOE1(2) ------>ZmHOX2a(1)         xxxxxxxxxxxxxxxx>smallRNA(s)   <---------YAB1--------->YAB1<-----   cacattatcatcctccatagcagtgtctattagagcattttcattggtgacctttttagagatatctttactatagtttattataaaaattaacattatt  19584900                                                                                         ---------->DOF2                                                                                       ------>ZmHOX2a(1)                                                                                    ------>ZmHOX2a(1)                     --------->TGA1a                                                <---------------AGL15                     --------->O2                                              ------>ZmHOX2a(2)                     <---------TGA1a                                           ===============HOX2a_HOX2a            <---------AHL20(2)                                               <---------ARR11(3)           <---------AHL20(2)                                                <---------ARR14(2)        <--------HAHB4                                                       <-----------ARR10        --------->ATHB12    --------->ICU4                                   --------->ARR11(3)       <---------ATHB12     <---------YAB1       <---------ARR11(3)          --------->ARR14(2) -------AHL20(2)     <---------O2                --------->ARR11(3)          <---------AGP1 ----->AHL20(2)      ==========================bZIP_DOF           <xxxxxxxxxxxxxxxxsmallRNA(s) ------AHL20(2)      ==========================bZIP_DOF           ---------->DOF2   --------------->AGL15 ----YAB1  --------->AHL20(2)       ---------->DOF2 <----------DOF2         <---------CCA1(2)   ttaatttgaatcatttattagtcatgtgtgatgtttgtaaaagtaagaaaatgtctttgcagagacatgaaagacactggatcttcctcctaaaagcact  19585000                                                                      <------MYB46(1)                                                                     <---------AtMYB61                        --------->AHL20(2)                         <------ZmHOX2a(1)                        <---------AHL20(2)                       <---------TOE2(3)                    <---------AHL20(2)                          --------->YAB1            <---------AHL20(1)                                 <---------ATHB12            <---------AHL20(2)       <---------AHL20(2)        --------->ICU4            --------->AHL20(2)      --------->AHL20(2)     --------->ZAT18      <---------At4g35610       <---------AHL20(1)       --------->AHL20(2)         <---------ZAT14      --------->At4g35610       --------->AHL20(2)       <---------AHL20(2)         ------------>CBF    --------->GLK1(2)   --       <---------AHL20(2)      --------->AHL20(2)   <---------AHL20(2)<------MYB83         ---------- <-----------GT1   <---------AHL20(2)--------->AHL20(2)  xxxxxxxxxxxxxxxx>smallRNA(s)  ---------->DOF2   aaataacattttattttattttttatttaaaaaaaaaatttaaaaacactgtatttttttgtgcaatgaggatggtctaagaagctgatcaaagaaagat  19585100             --------->AHL20(1)            -------->ATHB1            --------->ATHB51            <---------ICU4            <--------HAHB4            --------->AHL20(2)            --------->YAB1            <---------AHL20(2)           <---------ATHB51           --------->ICU4       <-------TEIL    ----------->GT1  <-----------GT1                --------->YAB1   --------------->AtSPL8                          <---------YAB1   <---------------AtSPL8                         --------->AHL20(1)               <----------DOF2   --------------->AtSPL3             ------->TEIL<---------AHL20(2)      <----------DOF2 -------->DOF2  <---------AHL20(2) <---------YAB1 --------->AHL20(2)   --------->ARR14(2) >DOF2 ------------>CBF        <-----------HVH21 --------->YAB1        <---------ARR14(2)   gaaaagaggtacaattattttatatactatctctgtcatgaatcttgcccattataatacattaagagaagcagttctttttattcttttcatgctctac  19585200                ---------->DOF2              <---------ATHB12                                       --------->ARR14(2)          ------------>CBF                                           <---------ARR14(2)         <---------At4g35610   <----------DOF2                  --------->MYB52(1)       <---------WRKY12  ------->PIF5                  --------->ANAC58     <-----------HVH21   <-------PIF5               <---------ARR14(2)   <---------TOE2(3) --------->ZAT18                --------->ARR14(2)                           ----   <---------TOE1(3) <---------ZAT18     <---------YAB1--------->ANAC58                    ----------   atgttaaggtcagccaatgaaagagcacttgcactttcgaattttgatgaagagaaaacgcatgaacaacgggtctgtctaaactcttgtatgccacaaa  19585300                                                              <---------TOE2(3)                                                    --------->YAB1                                                    <---------ICU4                               ----                                                 --------->YAB1                                  ----                                   <---------ATHB12<---------YAB1                            <-------      ---------->DOF2--------->ANAC46   <---------ZAT14      ---------->DOF2       --------->ARR14(2) ----->AHL20(2)      --------->ANAC58   --------->REM1(2) --------->TOE2(3)        <---------ARR14(2) ->RAV1(1)           --------->ANAC58   --------->ZAT14--------->YAB1           --------->YAB1   ----   tatttatctaaagtcttcatcccaagcaaaccatctaatcagtgaagactcttataatcacattaaagttttcttcaaaaaatcatatactggtttttca  19585400  Previous    Next  AGI:  At5g48280.1    Description:  unknown protein Range:  from: 19584290    to: 19584914    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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